RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 AVPP01185 164 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 CRYBG3Q68DQ2 2970 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 INSP01308 110 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 LINC00242Q5T6M2 205 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 HIST2H2BCQ6DN03 193 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 Q6ZTI0 123 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 CHCHD7Q9BUK0 85 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 LAMTOR3Q9UHA4 124 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 TRAV13-2A0A0B4J235 113 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 ATOX1O00244 68 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 NDUFA1O15239 70 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 BRI3O95415 125 aa7.55□□□□□ -1.2
PRPF38B-201ENST00000370021 COX7CP15954 63 aa7.54□□□□□ -1.2
PRPF38B-201ENST00000370021 C20orf197Q8N268 126 aa7.54□□□□□ -1.2
PRPF38B-201ENST00000370021 ZFHX3Q15911 3703 aa7.54□□□□□ -1.2
PRPF38B-201ENST00000370021 A0A087WYN8 130 aa7.54□□□□□ -1.2
PRPF38B-201ENST00000370021 HRCT1Q6UXD1 115 aa7.54□□□□□ -1.2
PRPF38B-201ENST00000370021 CSDC2Q9Y534 153 aaKnown RBP7.54□□□□□ -1.2
PRPF38B-201ENST00000370021 PRR3P79522 188 aaKnown RBP7.54□□□□□ -1.2
PRPF38B-201ENST00000370021 PYGO1Q9Y3Y4 419 aa7.54□□□□□ -1.2
PRPF38B-201ENST00000370021 IGLV10-54A0A075B6I4 117 aa7.53□□□□□ -1.2
PRPF38B-201ENST00000370021 LOC100131303A0A0U1RQF7 123 aa7.53□□□□□ -1.2
PRPF38B-201ENST00000370021 A6NDX4 124 aa7.53□□□□□ -1.2
PRPF38B-201ENST00000370021 TMEM243Q9BU79 118 aa7.53□□□□□ -1.2
PRPF38B-201ENST00000370021 K7EMT4 169 aa7.53□□□□□ -1.2
PRPF38B-201ENST00000370021 DNAJC30Q96LL9 226 aa7.53□□□□□ -1.2
PRPF38B-201ENST00000370021 FAM19A4Q96LR4 140 aa7.53□□□□□ -1.2
PRPF38B-201ENST00000370021 FAM240AA0A1B0GVK7 77 aa7.52□□□□□ -1.21
PRPF38B-201ENST00000370021 HILS1P60008 231 aa7.52□□□□□ -1.21
PRPF38B-201ENST00000370021 SMIM11BQ8TCY0 68 aa7.52□□□□□ -1.21
PRPF38B-201ENST00000370021 ESM1Q9NQ30 184 aa7.52□□□□□ -1.21
PRPF38B-201ENST00000370021 SMIM9A6NGZ8 99 aa7.52□□□□□ -1.21
PRPF38B-201ENST00000370021 USP17L23D6RBM5 183 aa7.52□□□□□ -1.21
PRPF38B-201ENST00000370021 ENHOQ6UWT2 76 aa7.52□□□□□ -1.21
PRPF38B-201ENST00000370021 LINC00846Q9NV44 126 aa7.52□□□□□ -1.21
PRPF38B-201ENST00000370021 F8P00451 2351 aa7.52□□□□□ -1.21
PRPF38B-201ENST00000370021 TRBV7-7A0A0K0K1E9 115 aa7.51□□□□□ -1.21
PRPF38B-201ENST00000370021 B4DSR2 109 aa7.51□□□□□ -1.21
PRPF38B-201ENST00000370021 GHRHP01286 108 aa7.51□□□□□ -1.21
PRPF38B-201ENST00000370021 PLA2G2AP14555 144 aa7.51□□□□□ -1.21
PRPF38B-201ENST00000370021 CXCL5P42830 114 aa7.51□□□□□ -1.21
PRPF38B-201ENST00000370021 COX7B2Q8TF08 81 aa7.51□□□□□ -1.21
PRPF38B-201ENST00000370021 LINC00526Q96FQ7 95 aa7.51□□□□□ -1.21
PRPF38B-201ENST00000370021 SMIM1B2RUZ4 78 aa7.51□□□□□ -1.21
PRPF38B-201ENST00000370021 S100A7L2Q5SY68 101 aa7.51□□□□□ -1.21
PRPF38B-201ENST00000370021 TMEM86BQ8N661 226 aa7.51□□□□□ -1.21
PRPF38B-201ENST00000370021 C9orf129Q5T035 196 aaKnown RBP7.5□□□□□ -1.21
PRPF38B-201ENST00000370021 FBXL19-AS1Q494R0 122 aa7.5□□□□□ -1.21
PRPF38B-201ENST00000370021 LINC00337Q8N6G1 96 aa7.5□□□□□ -1.21
PRPF38B-201ENST00000370021 FBN2P35556 2912 aa7.5□□□□□ -1.21
PRPF38B-201ENST00000370021 H3BUA1 57 aa7.5□□□□□ -1.21
PRPF38B-201ENST00000370021 HTN3P15516 51 aa7.5□□□□□ -1.21
PRPF38B-201ENST00000370021 C5orf47Q569G3 176 aa7.5□□□□□ -1.21
PRPF38B-201ENST00000370021 WFDC11Q8NEX6 87 aa7.5□□□□□ -1.21
PRPF38B-201ENST00000370021 RPL18AQ02543 176 aaKnown RBP7.49□□□□□ -1.21
PRPF38B-201ENST00000370021 IMUPQ9GZP8 106 aa7.49□□□□□ -1.21
PRPF38B-201ENST00000370021 ORMDL1Q9P0S3 153 aa7.49□□□□□ -1.21
PRPF38B-201ENST00000370021 SCXQ7RTU7 201 aa7.49□□□□□ -1.21
PRPF38B-201ENST00000370021 FLNCQ14315 2725 aa7.49□□□□□ -1.21
PRPF38B-201ENST00000370021 IGLV1-40P01703 118 aa7.48□□□□□ -1.21
PRPF38B-201ENST00000370021 C4orf26Q17RF5 130 aa7.48□□□□□ -1.21
PRPF38B-201ENST00000370021 GCN1Q92616 2671 aaKnown RBP7.48□□□□□ -1.21
PRPF38B-201ENST00000370021 PSMB8P28062 276 aa7.48□□□□□ -1.21
PRPF38B-201ENST00000370021 FAM19A1Q7Z5A9 133 aa7.48□□□□□ -1.21
PRPF38B-201ENST00000370021 K7EQD1 137 aa7.47□□□□□ -1.21
PRPF38B-201ENST00000370021 CCL18P55774 89 aa7.47□□□□□ -1.21
PRPF38B-201ENST00000370021 C1orf43Q9BWL3 253 aa7.47□□□□□ -1.21
PRPF38B-201ENST00000370021 UBL5Q9BZL1 73 aa7.47□□□□□ -1.21
PRPF38B-201ENST00000370021 WFDC10AQ9H1F0 79 aa7.47□□□□□ -1.21
PRPF38B-201ENST00000370021 SNURFQ9Y675 71 aa7.47□□□□□ -1.21
PRPF38B-201ENST00000370021 MAP6D1Q9H9H5 199 aa7.47□□□□□ -1.21
PRPF38B-201ENST00000370021 UCNP55089 124 aa7.47□□□□□ -1.21
PRPF38B-201ENST00000370021 SERP2Q8N6R1 65 aa7.46□□□□□ -1.21
PRPF38B-201ENST00000370021 CYSTM1Q9H1C7 97 aa7.46□□□□□ -1.22
PRPF38B-201ENST00000370021 NF1P21359 2839 aa7.46□□□□□ -1.22
PRPF38B-201ENST00000370021 TIMM17BO60830 172 aa7.45□□□□□ -1.22
PRPF38B-201ENST00000370021 ZNF462Q96JM2 2506 aa7.45□□□□□ -1.22
PRPF38B-201ENST00000370021 A8MTW9 85 aa7.45□□□□□ -1.22
PRPF38B-201ENST00000370021 PRB2P02812 416 aaPredicted RBP7.45□□□□□ -1.22
PRPF38B-201ENST00000370021 Q96MF0 132 aa7.45□□□□□ -1.22
PRPF38B-201ENST00000370021 DOPEY1Q5JWR5 2465 aa7.45□□□□□ -1.22
PRPF38B-201ENST00000370021 UTP20O75691 2785 aaKnown RBP7.44□□□□□ -1.22
PRPF38B-201ENST00000370021 H0YGX0 51 aa7.44□□□□□ -1.22
PRPF38B-201ENST00000370021 NBL1P41271 181 aa7.44□□□□□ -1.22
PRPF38B-201ENST00000370021 LRRC75A-AS1Q8N1F1 130 aa7.44□□□□□ -1.22
PRPF38B-201ENST00000370021 RBM3P98179 157 aaKnown RBP7.44□□□□□ -1.22
PRPF38B-201ENST00000370021 FAM104AQ969W3 186 aa7.44□□□□□ -1.22
PRPF38B-201ENST00000370021 CDC42SE2Q9NRR3 84 aa7.44□□□□□ -1.22
PRPF38B-201ENST00000370021 TEX15Q9BXT5 2789 aa7.44□□□□□ -1.22
PRPF38B-201ENST00000370021 DAD1P61803 113 aa7.44□□□□□ -1.22
PRPF38B-201ENST00000370021 PKIGQ9Y2B9 76 aa7.44□□□□□ -1.22
PRPF38B-201ENST00000370021 IGLV4-60A0A075B6I1 120 aa7.43□□□□□ -1.22
PRPF38B-201ENST00000370021 DEFB4AO15263 64 aa7.43□□□□□ -1.22
PRPF38B-201ENST00000370021 NTM-AS1Q6ZSK4 140 aa7.43□□□□□ -1.22
PRPF38B-201ENST00000370021 OVOL2Q9BRP0 275 aa7.43□□□□□ -1.22
PRPF38B-201ENST00000370021 CSMD2Q7Z408 3487 aa7.43□□□□□ -1.22
PRPF38B-201ENST00000370021 C9orf116Q5BN46 136 aaPredicted RBP7.42□□□□□ -1.22
PRPF38B-201ENST00000370021 UPK3BQ9BT76 320 aa7.42□□□□□ -1.22
PRPF38B-201ENST00000370021 A0A0U1RQV1 116 aa7.41□□□□□ -1.22
PRPF38B-201ENST00000370021 VPS13CQ709C8 3753 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms