RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 UBE2D1P51668 147 aa8.41□□□□□ -1.06
EFNA1-201ENST00000368406 SEC11AP67812 179 aa8.41□□□□□ -1.06
EFNA1-201ENST00000368406 CD164L2Q6UWJ8 174 aa8.41□□□□□ -1.06
EFNA1-201ENST00000368406 MAP1LC3CQ9BXW4 147 aa8.41□□□□□ -1.06
EFNA1-201ENST00000368406 DNAH11Q96DT5 4516 aa8.4□□□□□ -1.06
EFNA1-201ENST00000368406 COX7A2LO14548 114 aa8.4□□□□□ -1.06
EFNA1-201ENST00000368406 A0A0J9YXV3 536 aa8.39□□□□□ -1.07
EFNA1-201ENST00000368406 HERVK_113P63121 156 aa8.39□□□□□ -1.07
EFNA1-201ENST00000368406 FOXI1Q12951 378 aa8.39□□□□□ -1.07
EFNA1-201ENST00000368406 CHTOPQ9Y3Y2 248 aaKnown RBP8.39□□□□□ -1.07
EFNA1-201ENST00000368406 LINC00242Q5T6M2 205 aa8.38□□□□□ -1.07
EFNA1-201ENST00000368406 CFAP161Q6P656 301 aa8.38□□□□□ -1.07
EFNA1-201ENST00000368406 C5orf38Q86SI9 138 aa8.38□□□□□ -1.07
EFNA1-201ENST00000368406 LINC00469Q8N7U9 141 aa8.38□□□□□ -1.07
EFNA1-201ENST00000368406 PACRGQ96M98 296 aaPredicted RBP8.38□□□□□ -1.07
EFNA1-201ENST00000368406 CHAC1Q9BUX1 264 aa8.38□□□□□ -1.07
EFNA1-201ENST00000368406 TINCRA0A1B0GVN0 87 aa8.37□□□□□ -1.07
EFNA1-201ENST00000368406 USP17L23D6RBM5 183 aa8.37□□□□□ -1.07
EFNA1-201ENST00000368406 APOMO95445 188 aa8.37□□□□□ -1.07
EFNA1-201ENST00000368406 SNRPEP62304 92 aaKnown RBP8.37□□□□□ -1.07
EFNA1-201ENST00000368406 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
EFNA1-201ENST00000368406 KRTAP26-1Q6PEX3 210 aa8.37□□□□□ -1.07
EFNA1-201ENST00000368406 DYNC1H1Q14204 4646 aaKnown RBP8.37□□□□□ -1.07
EFNA1-201ENST00000368406 A0A087WTM6 91 aa8.37□□□□□ -1.07
EFNA1-201ENST00000368406 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
EFNA1-201ENST00000368406 KRTDAPP60985 99 aa8.37□□□□□ -1.07
EFNA1-201ENST00000368406 HIST3H2BBQ8N257 126 aa8.37□□□□□ -1.07
EFNA1-201ENST00000368406 MAPKAPK5-AS1Q8N8E1 139 aa8.37□□□□□ -1.07
EFNA1-201ENST00000368406 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
EFNA1-201ENST00000368406 hDV102S1A0JD36 115 aa8.36□□□□□ -1.07
EFNA1-201ENST00000368406 H3BRM9 83 aa8.36□□□□□ -1.07
EFNA1-201ENST00000368406 COX6A2Q02221 97 aa8.36□□□□□ -1.07
EFNA1-201ENST00000368406 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.35□□□□□ -1.07
EFNA1-201ENST00000368406 IGHV3OR16-9A0A0B4J2B5 98 aa8.35□□□□□ -1.07
EFNA1-201ENST00000368406 F8VRH5 84 aa8.35□□□□□ -1.07
EFNA1-201ENST00000368406 IGLC3P0DOY3 106 aa8.35□□□□□ -1.07
EFNA1-201ENST00000368406 HIGD2BQ4VC39 106 aa8.35□□□□□ -1.07
EFNA1-201ENST00000368406 TMEM170BQ5T4T1 132 aa8.35□□□□□ -1.07
EFNA1-201ENST00000368406 FAM19A3Q7Z5A8 133 aa8.35□□□□□ -1.07
EFNA1-201ENST00000368406 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
EFNA1-201ENST00000368406 C20orf202A1L168 122 aa8.34□□□□□ -1.07
EFNA1-201ENST00000368406 LRCOL1A6NCL2 159 aa8.34□□□□□ -1.07
EFNA1-201ENST00000368406 SYS1-DBNDD2H3BUS1 97 aa8.34□□□□□ -1.07
EFNA1-201ENST00000368406 WFDC2Q14508 124 aa8.34□□□□□ -1.07
EFNA1-201ENST00000368406 SPATA12Q7Z6I5 190 aa8.34□□□□□ -1.07
EFNA1-201ENST00000368406 Q8N814 137 aa8.34□□□□□ -1.07
EFNA1-201ENST00000368406 ORAOV1Q8WV07 137 aa8.34□□□□□ -1.07
EFNA1-201ENST00000368406 PGPEP1Q9NXJ5 209 aa8.34□□□□□ -1.07
EFNA1-201ENST00000368406 CDKN2A-AS1Q9UH64 79 aa8.34□□□□□ -1.07
EFNA1-201ENST00000368406 IGLV4-69A0A075B6H9 119 aa8.33□□□□□ -1.08
EFNA1-201ENST00000368406 A0A087WZ39 114 aa8.33□□□□□ -1.08
EFNA1-201ENST00000368406 ZNF561-AS1K7EIQ3 104 aa8.33□□□□□ -1.08
EFNA1-201ENST00000368406 PLNP26678 52 aa8.33□□□□□ -1.08
EFNA1-201ENST00000368406 ODF1Q14990 250 aa8.33□□□□□ -1.08
EFNA1-201ENST00000368406 C15orf56Q8N910 161 aa8.33□□□□□ -1.08
EFNA1-201ENST00000368406 HIST1H2BLQ99880 126 aa8.33□□□□□ -1.08
EFNA1-201ENST00000368406 PMCHL2Q9BQD1 86 aa8.33□□□□□ -1.08
EFNA1-201ENST00000368406 C5orf52A6NGY3 159 aa8.32□□□□□ -1.08
EFNA1-201ENST00000368406 C11orf86A6NJI1 115 aa8.32□□□□□ -1.08
EFNA1-201ENST00000368406 C16orf90A8MZG2 172 aa8.32□□□□□ -1.08
EFNA1-201ENST00000368406 DPM2O94777 84 aa8.32□□□□□ -1.08
EFNA1-201ENST00000368406 PRSS2P07478 247 aa8.32□□□□□ -1.08
EFNA1-201ENST00000368406 C3orf79P0CE67 100 aa8.32□□□□□ -1.08
EFNA1-201ENST00000368406 KRTAP10-2P60368 255 aa8.32□□□□□ -1.08
EFNA1-201ENST00000368406 SPAG11BQ08648 103 aa8.32□□□□□ -1.08
EFNA1-201ENST00000368406 OR10D4PQ8NGN7 298 aa8.32□□□□□ -1.08
EFNA1-201ENST00000368406 TOMM7Q9P0U1 55 aa8.32□□□□□ -1.08
EFNA1-201ENST00000368406 SPINK8P0C7L1 97 aa8.31□□□□□ -1.08
EFNA1-201ENST00000368406 ZNF22P17026 224 aaPredicted RBP8.31□□□□□ -1.08
EFNA1-201ENST00000368406 CDPF1Q6NVV7 123 aa8.31□□□□□ -1.08
EFNA1-201ENST00000368406 PET117Q6UWS5 81 aa8.31□□□□□ -1.08
EFNA1-201ENST00000368406 KIAA1109Q2LD37 5005 aa8.31□□□□□ -1.08
EFNA1-201ENST00000368406 IGHV3-64A0A075B6Q5 118 aa8.3□□□□□ -1.08
EFNA1-201ENST00000368406 GVQW2A0A096LPI5 108 aaPredicted RBP8.3□□□□□ -1.08
EFNA1-201ENST00000368406 IGLV5-52A0A0A0MRZ9 124 aa8.3□□□□□ -1.08
EFNA1-201ENST00000368406 IGKCP01834 107 aa8.3□□□□□ -1.08
EFNA1-201ENST00000368406 LINC01561Q8N1V8 128 aa8.3□□□□□ -1.08
EFNA1-201ENST00000368406 LRP1BQ9NZR2 4599 aa8.3□□□□□ -1.08
EFNA1-201ENST00000368406 IGLV5-45A0A087WSX0 123 aa8.29□□□□□ -1.08
EFNA1-201ENST00000368406 LINC00526Q96FQ7 95 aa8.29□□□□□ -1.08
EFNA1-201ENST00000368406 DNAH5Q8TE73 4624 aa8.29□□□□□ -1.08
EFNA1-201ENST00000368406 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.29□□□□□ -1.08
EFNA1-201ENST00000368406 SMIM1B2RUZ4 78 aa8.29□□□□□ -1.08
EFNA1-201ENST00000368406 HERVK_113P61574 105 aa8.29□□□□□ -1.08
EFNA1-201ENST00000368406 NTN5Q8WTR8 489 aaPredicted RBP8.29□□□□□ -1.08
EFNA1-201ENST00000368406 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
EFNA1-201ENST00000368406 FUSP35637 526 aaKnown RBP eCLIP8.28□□□□□ -1.08
EFNA1-201ENST00000368406 LINC01545Q5VT33 79 aa8.28□□□□□ -1.08
EFNA1-201ENST00000368406 AKR1D1P51857 326 aa8.27□□□□□ -1.09
EFNA1-201ENST00000368406 CKS1BP61024 79 aa8.27□□□□□ -1.09
EFNA1-201ENST00000368406 C6orf226Q5I0X4 101 aa8.27□□□□□ -1.09
EFNA1-201ENST00000368406 COX7B2Q8TF08 81 aa8.27□□□□□ -1.09
EFNA1-201ENST00000368406 CARD19Q96LW7 228 aa8.27□□□□□ -1.09
EFNA1-201ENST00000368406 NDUFA1O15239 70 aa8.26□□□□□ -1.09
EFNA1-201ENST00000368406 Q8IZM0 81 aa8.26□□□□□ -1.09
EFNA1-201ENST00000368406 HERC2O95714 4834 aa8.25□□□□□ -1.09
EFNA1-201ENST00000368406 TMEM223A0PJW6 202 aa8.25□□□□□ -1.09
EFNA1-201ENST00000368406 CDK2AP2O75956 126 aa8.25□□□□□ -1.09
EFNA1-201ENST00000368406 SCGB1D1O95968 90 aa8.25□□□□□ -1.09
EFNA1-201ENST00000368406 SYCNQ0VAF6 134 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms