RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 TM2D2Q9BX73 214 aa12.46□□□□□ -0.41
LMNA-204ENST00000368298 SNHG12Q9BXW3 62 aa12.46□□□□□ -0.41
LMNA-204ENST00000368298 COX11Q9Y6N1 276 aa12.46□□□□□ -0.41
LMNA-204ENST00000368298 DNAH17Q9UFH2 4485 aa12.46□□□□□ -0.41
LMNA-204ENST00000368298 IGLV4-60A0A075B6I1 120 aa12.46□□□□□ -0.42
LMNA-204ENST00000368298 UBE2WQ96B02 151 aa12.46□□□□□ -0.42
LMNA-204ENST00000368298 ZNF25P17030 456 aaPredicted RBP12.45□□□□□ -0.42
LMNA-204ENST00000368298 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
LMNA-204ENST00000368298 RMI2Q96E14 147 aa12.45□□□□□ -0.42
LMNA-204ENST00000368298 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.44□□□□□ -0.42
LMNA-204ENST00000368298 IGKV2-29A2NJV5 120 aaPredicted RBP12.44□□□□□ -0.42
LMNA-204ENST00000368298 FGF6P10767 208 aa12.44□□□□□ -0.42
LMNA-204ENST00000368298 MIAQ16674 131 aa12.44□□□□□ -0.42
LMNA-204ENST00000368298 LINC00269Q8N2A0 174 aa12.44□□□□□ -0.42
LMNA-204ENST00000368298 CST9LQ9H4G1 147 aa12.44□□□□□ -0.42
LMNA-204ENST00000368298 CRPP02741 224 aa12.43□□□□□ -0.42
LMNA-204ENST00000368298 NMUP48645 174 aa12.43□□□□□ -0.42
LMNA-204ENST00000368298 OPRPNQ99935 248 aaPredicted RBP12.43□□□□□ -0.42
LMNA-204ENST00000368298 PYGO1Q9Y3Y4 419 aa12.43□□□□□ -0.42
LMNA-204ENST00000368298 HECTD4Q9Y4D8 3996 aa12.43□□□□□ -0.42
LMNA-204ENST00000368298 IGLV4-3A0A075B6K6 122 aa12.42□□□□□ -0.42
LMNA-204ENST00000368298 PSCAO43653 123 aa12.42□□□□□ -0.42
LMNA-204ENST00000368298 AMMECR1LQ6DCA0 310 aa12.42□□□□□ -0.42
LMNA-204ENST00000368298 IGLV4-69A0A075B6H9 119 aa12.41□□□□□ -0.42
LMNA-204ENST00000368298 A0A087WTM6 91 aa12.41□□□□□ -0.42
LMNA-204ENST00000368298 LRCOL1A6NCL2 159 aa12.41□□□□□ -0.42
LMNA-204ENST00000368298 REG3AQ06141 175 aa12.41□□□□□ -0.42
LMNA-204ENST00000368298 LBHQ53QV2 105 aaPredicted RBP12.41□□□□□ -0.42
LMNA-204ENST00000368298 BOD1L2Q8IYS8 172 aa12.41□□□□□ -0.42
LMNA-204ENST00000368298 C2orf88Q9BSF0 95 aa12.41□□□□□ -0.42
LMNA-204ENST00000368298 CSDC2Q9Y534 153 aaKnown RBP12.41□□□□□ -0.42
LMNA-204ENST00000368298 IGKV2D-26A0A0A0MRZ7 120 aa12.4□□□□□ -0.42
LMNA-204ENST00000368298 PAPPA-AS1Q5QFB9 102 aa12.4□□□□□ -0.42
LMNA-204ENST00000368298 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.42
LMNA-204ENST00000368298 C11orf86A6NJI1 115 aa12.4□□□□□ -0.43
LMNA-204ENST00000368298 DLEU1O43261 78 aa12.4□□□□□ -0.43
LMNA-204ENST00000368298 NPSP0C0P6 89 aa12.4□□□□□ -0.43
LMNA-204ENST00000368298 BATFQ16520 125 aa12.4□□□□□ -0.43
LMNA-204ENST00000368298 PCP2Q8IVA1 136 aa12.4□□□□□ -0.43
LMNA-204ENST00000368298 TIMM21Q9BVV7 248 aa12.4□□□□□ -0.43
LMNA-204ENST00000368298 C1orf43Q9BWL3 253 aa12.4□□□□□ -0.43
LMNA-204ENST00000368298 SPANXA1Q9NS26 97 aa12.4□□□□□ -0.43
LMNA-204ENST00000368298 IGKV2D-24A0A075B6R9 120 aa12.39□□□□□ -0.43
LMNA-204ENST00000368298 TRAV8-4A0A0B4J246 113 aa12.39□□□□□ -0.43
LMNA-204ENST00000368298 SMAGPQ0VAQ4 97 aa12.39□□□□□ -0.43
LMNA-204ENST00000368298 C2orf91Q6ZV80 131 aa12.39□□□□□ -0.43
LMNA-204ENST00000368298 VCX2Q9H322 139 aa12.39□□□□□ -0.43
LMNA-204ENST00000368298 UBE2D4Q9Y2X8 147 aa12.39□□□□□ -0.43
LMNA-204ENST00000368298 KRTAP26-1Q6PEX3 210 aa12.38□□□□□ -0.43
LMNA-204ENST00000368298 TMEM101Q96IK0 257 aa12.38□□□□□ -0.43
LMNA-204ENST00000368298 HINT1P49773 126 aaPredicted RBP12.37□□□□□ -0.43
LMNA-204ENST00000368298 CLPSL2Q6UWE3 100 aa12.37□□□□□ -0.43
LMNA-204ENST00000368298 OR5A1Q8NGJ0 315 aa12.37□□□□□ -0.43
LMNA-204ENST00000368298 FAM104AQ969W3 186 aa12.37□□□□□ -0.43
LMNA-204ENST00000368298 CDC42SE2Q9NRR3 84 aa12.37□□□□□ -0.43
LMNA-204ENST00000368298 AMELXQ99217 191 aa12.36□□□□□ -0.43
LMNA-204ENST00000368298 PKHD1P08F94 4074 aa12.36□□□□□ -0.43
LMNA-204ENST00000368298 PKD1P98161 4303 aa12.36□□□□□ -0.43
LMNA-204ENST00000368298 Q6ZUT4 128 aa12.34□□□□□ -0.43
LMNA-204ENST00000368298 TTTY13Q9BZ97 58 aa12.34□□□□□ -0.43
LMNA-204ENST00000368298 PGPEP1Q9NXJ5 209 aa12.34□□□□□ -0.43
LMNA-204ENST00000368298 E9PLD3 99 aa12.34□□□□□ -0.43
LMNA-204ENST00000368298 KRTAP10-2P60368 255 aa12.34□□□□□ -0.43
LMNA-204ENST00000368298 HERVK_113P61574 105 aa12.34□□□□□ -0.43
LMNA-204ENST00000368298 RNASE13Q5GAN3 156 aaKnown RBP12.34□□□□□ -0.43
LMNA-204ENST00000368298 DGAT2L7PQ6IED9 249 aa12.34□□□□□ -0.43
LMNA-204ENST00000368298 CHAC1Q9BUX1 264 aa12.34□□□□□ -0.43
LMNA-204ENST00000368298 MRPS36P82909 103 aaKnown RBP12.33□□□□□ -0.44
LMNA-204ENST00000368298 A0A0J9YXV3 536 aa12.32□□□□□ -0.44
LMNA-204ENST00000368298 WFDC2Q14508 124 aa12.32□□□□□ -0.44
LMNA-204ENST00000368298 TMEM170BQ5T4T1 132 aa12.32□□□□□ -0.44
LMNA-204ENST00000368298 Q8N814 137 aa12.32□□□□□ -0.44
LMNA-204ENST00000368298 DNAH11Q96DT5 4516 aa12.32□□□□□ -0.44
LMNA-204ENST00000368298 IGLV10-54A0A075B6I4 117 aa12.31□□□□□ -0.44
LMNA-204ENST00000368298 LINC00959A0A1B0GUT2 108 aa12.3□□□□□ -0.44
LMNA-204ENST00000368298 A0A1B0GV90 55 aa12.3□□□□□ -0.44
LMNA-204ENST00000368298 COL5A1-AS1Q5SY13 56 aa12.3□□□□□ -0.44
LMNA-204ENST00000368298 HIGD1BQ9P298 99 aa12.3□□□□□ -0.44
LMNA-204ENST00000368298 CCL25O15444 150 aa12.29□□□□□ -0.44
LMNA-204ENST00000368298 ZNF22P17026 224 aaPredicted RBP12.29□□□□□ -0.44
LMNA-204ENST00000368298 BVES-AS1Q5T3Y7 98 aa12.29□□□□□ -0.44
LMNA-204ENST00000368298 NTN5Q8WTR8 489 aaPredicted RBP12.29□□□□□ -0.44
LMNA-204ENST00000368298 IGKV3OR2-268A0A0C4DH90 116 aa12.28□□□□□ -0.44
LMNA-204ENST00000368298 HSD52Q0P140 79 aa12.28□□□□□ -0.44
LMNA-204ENST00000368298 DYNC1H1Q14204 4646 aaKnown RBP12.27□□□□□ -0.44
LMNA-204ENST00000368298 MYMXA0A1B0GTQ4 84 aa12.27□□□□□ -0.44
LMNA-204ENST00000368298 TMEM223A0PJW6 202 aa12.27□□□□□ -0.44
LMNA-204ENST00000368298 LECT2O14960 151 aa12.27□□□□□ -0.44
LMNA-204ENST00000368298 CHCHD10Q8WYQ3 142 aaPredicted RBP12.27□□□□□ -0.44
LMNA-204ENST00000368298 TINCRA0A1B0GVN0 87 aa12.27□□□□□ -0.45
LMNA-204ENST00000368298 C16orf90A8MZG2 172 aa12.27□□□□□ -0.45
LMNA-204ENST00000368298 UBE2D1P51668 147 aa12.26□□□□□ -0.45
LMNA-204ENST00000368298 SS18Q15532 418 aa12.26□□□□□ -0.45
LMNA-204ENST00000368298 C14orf177Q52M58 125 aa12.26□□□□□ -0.45
LMNA-204ENST00000368298 GAGE12HA6NDE8 117 aa12.25□□□□□ -0.45
LMNA-204ENST00000368298 USP17L23D6RBM5 183 aa12.25□□□□□ -0.45
LMNA-204ENST00000368298 LEPROTO15243 131 aa12.25□□□□□ -0.45
LMNA-204ENST00000368298 ZNF815PA8K554 130 aa12.24□□□□□ -0.45
LMNA-204ENST00000368298 FOXI1Q12951 378 aa12.24□□□□□ -0.45
LMNA-204ENST00000368298 TSPEAR-AS2P59090 65 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms