RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 ADORA2A-AS1P86434 159 aa5.46□□□□□ -1.53
SYNE1-208ENST00000367256 LINC00322Q6ZN03 302 aaPredicted RBP5.46□□□□□ -1.53
SYNE1-208ENST00000367256 DEFB131BA0A096LNP1 70 aa5.46□□□□□ -1.53
SYNE1-208ENST00000367256 FAM30AQ9NZY2 134 aa5.46□□□□□ -1.53
SYNE1-208ENST00000367256 DAZAP2Q15038 168 aaPredicted RBP5.46□□□□□ -1.53
SYNE1-208ENST00000367256 XAGE1AQ9HD64 81 aa5.46□□□□□ -1.53
SYNE1-208ENST00000367256 M0QXV9 152 aa5.46□□□□□ -1.54
SYNE1-208ENST00000367256 COX17Q14061 63 aa5.46□□□□□ -1.54
SYNE1-208ENST00000367256 M0QY20 66 aa5.46□□□□□ -1.54
SYNE1-208ENST00000367256 C22orf34Q6ZV56 151 aa5.45□□□□□ -1.54
SYNE1-208ENST00000367256 A6NDX4 124 aa5.45□□□□□ -1.54
SYNE1-208ENST00000367256 RNF185Q96GF1 192 aa5.45□□□□□ -1.54
SYNE1-208ENST00000367256 TRBV6-8A0A0A6YYG3 113 aa5.45□□□□□ -1.54
SYNE1-208ENST00000367256 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.45□□□□□ -1.54
SYNE1-208ENST00000367256 IGF1P05019 195 aa5.45□□□□□ -1.54
SYNE1-208ENST00000367256 NRACQ8N912 160 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 PPDPFQ9H3Y8 114 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 CR1P17927 2039 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 IGLV9-49A0A0B4J1Y8 123 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 MIFP14174 115 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 ZNF73O43830 326 aaPredicted RBP5.44□□□□□ -1.54
SYNE1-208ENST00000367256 C6orf99Q4VX62 202 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 ACANP16112 2415 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 SYCNQ0VAF6 134 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 K7EQG2 157 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 M0R378 163 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 IGLV2-11P01706 119 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 TRAV7A0A075B6U4 112 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 MRGPRG-AS1Q2M3A8 158 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 MAPKAPK5-AS1Q8N8E1 139 aa5.44□□□□□ -1.54
SYNE1-208ENST00000367256 EBI3Q14213 229 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 UBE2D2P62837 147 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 MTORP42345 2549 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 XGP55808 180 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 Q6ZQY7 126 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 LINC00526Q96FQ7 95 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 LINC00694P0DN24 101 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 BRWD1-AS2P59051 145 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 C10orf25Q5T742 122 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 LY6LH3BQJ8 138 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 ESRGQ1W209 222 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 Q6ZVQ6 151 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 LINC00474Q9P2X8 69 aa5.43□□□□□ -1.54
SYNE1-208ENST00000367256 WIPF1O43516 503 aa5.42□□□□□ -1.54
SYNE1-208ENST00000367256 LOC107984640A0A0U1RRK4 108 aa5.42□□□□□ -1.54
SYNE1-208ENST00000367256 RPL37AP8A6NKH3 93 aa5.42□□□□□ -1.54
SYNE1-208ENST00000367256 TNFRSF13BO14836 293 aaPredicted RBP5.42□□□□□ -1.54
SYNE1-208ENST00000367256 WFDC10AQ9H1F0 79 aa5.42□□□□□ -1.54
SYNE1-208ENST00000367256 ZFAND3Q9H8U3 227 aa5.42□□□□□ -1.54
SYNE1-208ENST00000367256 ANKRD17O75179 2603 aaKnown RBP5.42□□□□□ -1.54
SYNE1-208ENST00000367256 TRBV6-4A0A1B0GX49 114 aa5.42□□□□□ -1.54
SYNE1-208ENST00000367256 TSHBP01222 138 aa5.42□□□□□ -1.54
SYNE1-208ENST00000367256 CEP295Q9C0D2 2601 aa5.41□□□□□ -1.54
SYNE1-208ENST00000367256 DEFB114Q30KQ6 69 aa5.41□□□□□ -1.54
SYNE1-208ENST00000367256 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.41□□□□□ -1.54
SYNE1-208ENST00000367256 PLAC8L1A1L4L8 177 aa5.41□□□□□ -1.54
SYNE1-208ENST00000367256 PRYO14603 147 aa5.41□□□□□ -1.54
SYNE1-208ENST00000367256 MUC22E2RYF6 1773 aaPredicted RBP5.41□□□□□ -1.54
SYNE1-208ENST00000367256 TRBV7-6A0A0J9YX20 115 aa5.4□□□□□ -1.54
SYNE1-208ENST00000367256 LINC01548A6NM66 108 aa5.4□□□□□ -1.54
SYNE1-208ENST00000367256 POM121L12Q8N7R1 296 aa5.4□□□□□ -1.54
SYNE1-208ENST00000367256 SPTBN4Q9H254 2564 aa5.4□□□□□ -1.54
SYNE1-208ENST00000367256 CRIP1P50238 77 aa5.4□□□□□ -1.54
SYNE1-208ENST00000367256 SMIM11BQ8TCY0 68 aa5.4□□□□□ -1.54
SYNE1-208ENST00000367256 SERTAD4-AS1Q5TG53 156 aa5.4□□□□□ -1.54
SYNE1-208ENST00000367256 CRIP3Q6Q6R5 217 aa5.4□□□□□ -1.54
SYNE1-208ENST00000367256 TRAV10A0A0B4J240 114 aa5.4□□□□□ -1.55
SYNE1-208ENST00000367256 A8MZ25 164 aa5.4□□□□□ -1.55
SYNE1-208ENST00000367256 Q6ZPA2 131 aa5.4□□□□□ -1.55
SYNE1-208ENST00000367256 CELA1Q9UNI1 258 aa5.4□□□□□ -1.55
SYNE1-208ENST00000367256 Q6YL49 198 aa5.4□□□□□ -1.55
SYNE1-208ENST00000367256 KLLNB2CW77 178 aa5.39□□□□□ -1.55
SYNE1-208ENST00000367256 POLR2KP53803 58 aaKnown RBP5.39□□□□□ -1.55
SYNE1-208ENST00000367256 LOC100131303A0A0U1RQF7 123 aa5.39□□□□□ -1.55
SYNE1-208ENST00000367256 Q8N976 141 aa5.39□□□□□ -1.55
SYNE1-208ENST00000367256 PROK1P58294 105 aa5.38□□□□□ -1.55
SYNE1-208ENST00000367256 COL27A1Q8IZC6 1860 aaPredicted RBP5.38□□□□□ -1.55
SYNE1-208ENST00000367256 IGLV4-69A0A075B6H9 119 aa5.38□□□□□ -1.55
SYNE1-208ENST00000367256 BBC3Q96PG8 261 aaPredicted RBP5.38□□□□□ -1.55
SYNE1-208ENST00000367256 X6R8D5 127 aa5.38□□□□□ -1.55
SYNE1-208ENST00000367256 CXCL6P80162 114 aa5.38□□□□□ -1.55
SYNE1-208ENST00000367256 IGHV6-1A0A0B4J1U7 121 aa5.38□□□□□ -1.55
SYNE1-208ENST00000367256 CD164Q04900 197 aa5.38□□□□□ -1.55
SYNE1-208ENST00000367256 Q8IZM0 81 aa5.38□□□□□ -1.55
SYNE1-208ENST00000367256 KPRPQ5T749 579 aaPredicted RBP5.37□□□□□ -1.55
SYNE1-208ENST00000367256 PSPHP1O15172 72 aa5.37□□□□□ -1.55
SYNE1-208ENST00000367256 LELP1Q5T871 98 aa5.37□□□□□ -1.55
SYNE1-208ENST00000367256 LINC00482Q8N8I6 264 aa5.37□□□□□ -1.55
SYNE1-208ENST00000367256 REG3GQ6UW15 175 aa5.37□□□□□ -1.55
SYNE1-208ENST00000367256 M0R2N4 97 aa5.36□□□□□ -1.55
SYNE1-208ENST00000367256 IGLV2-18A0A075B6J9 118 aa5.36□□□□□ -1.55
SYNE1-208ENST00000367256 LINC00310P59036 64 aa5.36□□□□□ -1.55
SYNE1-208ENST00000367256 SHISA2Q6UWI4 295 aa5.36□□□□□ -1.55
SYNE1-208ENST00000367256 SOSTDC1Q6X4U4 206 aa5.36□□□□□ -1.55
SYNE1-208ENST00000367256 Q8N814 137 aa5.36□□□□□ -1.55
SYNE1-208ENST00000367256 COX8CQ7Z4L0 72 aa5.36□□□□□ -1.55
SYNE1-208ENST00000367256 RNASE3P12724 160 aaKnown RBP5.36□□□□□ -1.55
SYNE1-208ENST00000367256 RETNLBQ9BQ08 111 aa5.36□□□□□ -1.55
SYNE1-208ENST00000367256 IGIPA6NJ69 53 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms