RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 SERP2Q8N6R1 65 aa6.65□□□□□ -1.34
SYNE1-205ENST00000367251 MUC4Q99102 2169 aa6.65□□□□□ -1.35
SYNE1-205ENST00000367251 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.35
SYNE1-205ENST00000367251 Q6ZSV7 163 aa6.64□□□□□ -1.35
SYNE1-205ENST00000367251 Q8N9L7 120 aa6.64□□□□□ -1.35
SYNE1-205ENST00000367251 IGKV2-28A0A075B6P5 120 aa6.64□□□□□ -1.35
SYNE1-205ENST00000367251 IGKV2D-28P01615 120 aa6.64□□□□□ -1.35
SYNE1-205ENST00000367251 KPRPQ5T749 579 aaPredicted RBP6.64□□□□□ -1.35
SYNE1-205ENST00000367251 PLAC8L1A1L4L8 177 aa6.64□□□□□ -1.35
SYNE1-205ENST00000367251 C1orf158Q8N1D5 194 aa6.64□□□□□ -1.35
SYNE1-205ENST00000367251 UQCRQO14949 82 aa6.63□□□□□ -1.35
SYNE1-205ENST00000367251 IGIPA6NJ69 53 aa6.63□□□□□ -1.35
SYNE1-205ENST00000367251 CIRBP-AS1Q8TBR5 109 aa6.63□□□□□ -1.35
SYNE1-205ENST00000367251 MT-ATP8P03928 68 aa6.63□□□□□ -1.35
SYNE1-205ENST00000367251 Q6Q795 121 aa6.63□□□□□ -1.35
SYNE1-205ENST00000367251 KIAA1549Q9HCM3 1950 aa6.62□□□□□ -1.35
SYNE1-205ENST00000367251 MPLKIPQ8TAP9 179 aa6.62□□□□□ -1.35
SYNE1-205ENST00000367251 LST1O00453 97 aa6.62□□□□□ -1.35
SYNE1-205ENST00000367251 PLA2G2AP14555 144 aa6.62□□□□□ -1.35
SYNE1-205ENST00000367251 EXPH5Q8NEV8 1989 aa6.62□□□□□ -1.35
SYNE1-205ENST00000367251 NANOS2P60321 138 aaKnown RBP6.62□□□□□ -1.35
SYNE1-205ENST00000367251 ANKHD1Q8IWZ3 2542 aaKnown RBP6.61□□□□□ -1.35
SYNE1-205ENST00000367251 CLUHP3Q96NS8 147 aa6.61□□□□□ -1.35
SYNE1-205ENST00000367251 COX17Q14061 63 aa6.61□□□□□ -1.35
SYNE1-205ENST00000367251 ZFYVE26Q68DK2 2539 aa6.61□□□□□ -1.35
SYNE1-205ENST00000367251 SLPIP03973 132 aa6.61□□□□□ -1.35
SYNE1-205ENST00000367251 RPL28P46779 137 aaKnown RBP6.61□□□□□ -1.35
SYNE1-205ENST00000367251 LOC107984640A0A0U1RRK4 108 aa6.61□□□□□ -1.35
SYNE1-205ENST00000367251 NCOR2Q9Y618 2525 aa6.6□□□□□ -1.35
SYNE1-205ENST00000367251 C1orf134Q5TEV5 83 aa6.6□□□□□ -1.35
SYNE1-205ENST00000367251 HCFC1P51610 2035 aa6.6□□□□□ -1.35
SYNE1-205ENST00000367251 PLA2G1BP04054 148 aaKnown RBP6.6□□□□□ -1.35
SYNE1-205ENST00000367251 CD164L2Q6UWJ8 174 aa6.6□□□□□ -1.35
SYNE1-205ENST00000367251 BRK1Q8WUW1 75 aa6.6□□□□□ -1.35
SYNE1-205ENST00000367251 SCXQ7RTU7 201 aa6.59□□□□□ -1.35
SYNE1-205ENST00000367251 TLN2Q9Y4G6 2542 aa6.59□□□□□ -1.35
SYNE1-205ENST00000367251 J3QL48 77 aa6.59□□□□□ -1.35
SYNE1-205ENST00000367251 WFDC13Q8IUB5 93 aa6.59□□□□□ -1.35
SYNE1-205ENST00000367251 LINC01546A6NGU7 62 aa6.59□□□□□ -1.35
SYNE1-205ENST00000367251 FAM240AA0A1B0GVK7 77 aa6.59□□□□□ -1.36
SYNE1-205ENST00000367251 BBC3Q96PG8 261 aaPredicted RBP6.58□□□□□ -1.36
SYNE1-205ENST00000367251 C2CD3Q4AC94 2353 aa6.58□□□□□ -1.36
SYNE1-205ENST00000367251 PROK1P58294 105 aa6.58□□□□□ -1.36
SYNE1-205ENST00000367251 RPL37AP8A6NKH3 93 aa6.58□□□□□ -1.36
SYNE1-205ENST00000367251 GAS8-AS1O95177 125 aa6.58□□□□□ -1.36
SYNE1-205ENST00000367251 C10orf99Q6UWK7 81 aa6.57□□□□□ -1.36
SYNE1-205ENST00000367251 LINC01006Q8NI28 216 aa6.57□□□□□ -1.36
SYNE1-205ENST00000367251 IGLV4-69A0A075B6H9 119 aa6.57□□□□□ -1.36
SYNE1-205ENST00000367251 C3orf84H3BNL1 204 aa6.57□□□□□ -1.36
SYNE1-205ENST00000367251 CCKP06307 115 aa6.57□□□□□ -1.36
SYNE1-205ENST00000367251 Q8IZM0 81 aa6.57□□□□□ -1.36
SYNE1-205ENST00000367251 NDUFA7O95182 113 aa6.57□□□□□ -1.36
SYNE1-205ENST00000367251 CDC42SE2Q9NRR3 84 aa6.57□□□□□ -1.36
SYNE1-205ENST00000367251 LINC00959A0A1B0GUT2 108 aa6.56□□□□□ -1.36
SYNE1-205ENST00000367251 M0QXV9 152 aa6.56□□□□□ -1.36
SYNE1-205ENST00000367251 CSDC2Q9Y534 153 aaKnown RBP6.56□□□□□ -1.36
SYNE1-205ENST00000367251 LELP1Q5T871 98 aa6.56□□□□□ -1.36
SYNE1-205ENST00000367251 LINC00526Q96FQ7 95 aa6.56□□□□□ -1.36
SYNE1-205ENST00000367251 COL4A2P08572 1712 aa6.56□□□□□ -1.36
SYNE1-205ENST00000367251 TRAV23DV6A0A075B6W5 121 aa6.56□□□□□ -1.36
SYNE1-205ENST00000367251 Q6ZS46 218 aa6.56□□□□□ -1.36
SYNE1-205ENST00000367251 SMR3AQ99954 134 aa6.56□□□□□ -1.36
SYNE1-205ENST00000367251 ATP5EP56381 51 aaPredicted RBP6.55□□□□□ -1.36
SYNE1-205ENST00000367251 TLN1Q9Y490 2541 aaKnown RBP6.55□□□□□ -1.36
SYNE1-205ENST00000367251 A0A096LNJ9 63 aa6.55□□□□□ -1.36
SYNE1-205ENST00000367251 AMELXQ99217 191 aa6.55□□□□□ -1.36
SYNE1-205ENST00000367251 RETNLBQ9BQ08 111 aa6.55□□□□□ -1.36
SYNE1-205ENST00000367251 SPINK1P00995 79 aa6.54□□□□□ -1.36
SYNE1-205ENST00000367251 DHRS4-AS1Q9P1J3 65 aa6.54□□□□□ -1.36
SYNE1-205ENST00000367251 M0R378 163 aa6.54□□□□□ -1.36
SYNE1-205ENST00000367251 NDUFC1O43677 76 aa6.54□□□□□ -1.36
SYNE1-205ENST00000367251 C1orf137Q5JT78 98 aa6.54□□□□□ -1.36
SYNE1-205ENST00000367251 SDIM1Q6ZPB5 146 aa6.54□□□□□ -1.36
SYNE1-205ENST00000367251 CHCHD7Q9BUK0 85 aa6.54□□□□□ -1.36
SYNE1-205ENST00000367251 FAM229AH3BQW9 127 aa6.54□□□□□ -1.36
SYNE1-205ENST00000367251 BEAN1Q3B7T3 259 aa6.54□□□□□ -1.36
SYNE1-205ENST00000367251 MYO9AB2RTY4 2548 aa6.53□□□□□ -1.36
SYNE1-205ENST00000367251 Q6JHZ5 121 aa6.53□□□□□ -1.36
SYNE1-205ENST00000367251 DSCAML1Q8TD84 2053 aa6.53□□□□□ -1.36
SYNE1-205ENST00000367251 LINC01556Q5JQF7 62 aa6.53□□□□□ -1.36
SYNE1-205ENST00000367251 LINC00242Q5T6M2 205 aa6.53□□□□□ -1.36
SYNE1-205ENST00000367251 C6orf99Q4VX62 202 aa6.53□□□□□ -1.36
SYNE1-205ENST00000367251 C10orf25Q5T742 122 aa6.53□□□□□ -1.36
SYNE1-205ENST00000367251 SMIM11BQ8TCY0 68 aa6.52□□□□□ -1.36
SYNE1-205ENST00000367251 CDSNQ15517 529 aa6.52□□□□□ -1.37
SYNE1-205ENST00000367251 POM121L12Q8N7R1 296 aa6.52□□□□□ -1.37
SYNE1-205ENST00000367251 PRR4Q16378 134 aa6.52□□□□□ -1.37
SYNE1-205ENST00000367251 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.52□□□□□ -1.37
SYNE1-205ENST00000367251 LINC01561Q8N1V8 128 aa6.52□□□□□ -1.37
SYNE1-205ENST00000367251 A8MZ25 164 aa6.52□□□□□ -1.37
SYNE1-205ENST00000367251 WFDC10AQ9H1F0 79 aa6.52□□□□□ -1.37
SYNE1-205ENST00000367251 EML5Q05BV3 1969 aa6.51□□□□□ -1.37
SYNE1-205ENST00000367251 C16orf95Q9H693 158 aa6.51□□□□□ -1.37
SYNE1-205ENST00000367251 ADAMTS20P59510 1910 aa6.51□□□□□ -1.37
SYNE1-205ENST00000367251 DSCAMO60469 2012 aa6.51□□□□□ -1.37
SYNE1-205ENST00000367251 SMIM1B2RUZ4 78 aa6.51□□□□□ -1.37
SYNE1-205ENST00000367251 ENHOQ6UWT2 76 aa6.51□□□□□ -1.37
SYNE1-205ENST00000367251 F8WDY8 70 aa6.51□□□□□ -1.37
SYNE1-205ENST00000367251 XGP55808 180 aa6.51□□□□□ -1.37
SYNE1-205ENST00000367251 C18orf65Q6ZTR6 163 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms