RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 SMIM1B2RUZ4 78 aa12.2□□□□□ -0.46
NID1-202ENST00000366595 CSDC2Q9Y534 153 aaKnown RBP12.2□□□□□ -0.46
NID1-202ENST00000366595 TRBV10-3A0A0K0K1G6 114 aa12.2□□□□□ -0.46
NID1-202ENST00000366595 BRWD3Q6RI45 1802 aa12.19□□□□□ -0.46
NID1-202ENST00000366595 PRR9Q5T870 116 aa12.19□□□□□ -0.46
NID1-202ENST00000366595 NANOS2P60321 138 aaKnown RBP12.19□□□□□ -0.46
NID1-202ENST00000366595 BEAN1Q3B7T3 259 aa12.18□□□□□ -0.46
NID1-202ENST00000366595 IGHV6-1A0A0B4J1U7 121 aa12.18□□□□□ -0.46
NID1-202ENST00000366595 PLA2G5P39877 138 aa12.18□□□□□ -0.46
NID1-202ENST00000366595 Q8N6K4 173 aa12.18□□□□□ -0.46
NID1-202ENST00000366595 WNK1Q9H4A3 2382 aa12.16□□□□□ -0.46
NID1-202ENST00000366595 PCOTHQ58A44 107 aa12.16□□□□□ -0.46
NID1-202ENST00000366595 A0A087WYN8 130 aa12.15□□□□□ -0.46
NID1-202ENST00000366595 UNQ6190/PRO20217Q6UXQ8 127 aa12.15□□□□□ -0.46
NID1-202ENST00000366595 LINC00575Q6W349 94 aa12.15□□□□□ -0.46
NID1-202ENST00000366595 Q8NA96 180 aa12.15□□□□□ -0.46
NID1-202ENST00000366595 CRIP3Q6Q6R5 217 aa12.15□□□□□ -0.46
NID1-202ENST00000366595 MGAMO43451 1857 aa12.15□□□□□ -0.46
NID1-202ENST00000366595 HCG22E2RYF7 251 aa12.14□□□□□ -0.47
NID1-202ENST00000366595 ZNF843Q8N446 348 aa12.14□□□□□ -0.47
NID1-202ENST00000366595 VPREB1P12018 145 aa12.14□□□□□ -0.47
NID1-202ENST00000366595 CXCL6P80162 114 aa12.14□□□□□ -0.47
NID1-202ENST00000366595 ZNF702PQ9H963 129 aa12.14□□□□□ -0.47
NID1-202ENST00000366595 BCE1O60756 84 aa12.13□□□□□ -0.47
NID1-202ENST00000366595 CRIP2P52943 208 aaPredicted RBP12.13□□□□□ -0.47
NID1-202ENST00000366595 PTPRQQ9UMZ3 2332 aa12.13□□□□□ -0.47
NID1-202ENST00000366595 IGLV1-40P01703 118 aa12.12□□□□□ -0.47
NID1-202ENST00000366595 HIVEP2P31629 2446 aa12.12□□□□□ -0.47
NID1-202ENST00000366595 IGLV2-18A0A075B6J9 118 aa12.12□□□□□ -0.47
NID1-202ENST00000366595 SERTAD4-AS1Q5TG53 156 aa12.12□□□□□ -0.47
NID1-202ENST00000366595 X6R8D5 127 aa12.11□□□□□ -0.47
NID1-202ENST00000366595 LINC01561Q8N1V8 128 aa12.11□□□□□ -0.47
NID1-202ENST00000366595 CRYGAP11844 174 aa12.11□□□□□ -0.47
NID1-202ENST00000366595 Q9BRP9 147 aa12.11□□□□□ -0.47
NID1-202ENST00000366595 GAS8-AS1O95177 125 aa12.1□□□□□ -0.47
NID1-202ENST00000366595 CIRBP-AS1Q8TBR5 109 aa12.1□□□□□ -0.47
NID1-202ENST00000366595 AMELXQ99217 191 aa12.09□□□□□ -0.47
NID1-202ENST00000366595 SORL1Q92673 2214 aa12.09□□□□□ -0.47
NID1-202ENST00000366595 A0A087WSZ3 146 aa12.09□□□□□ -0.47
NID1-202ENST00000366595 LINC00310P59036 64 aa12.09□□□□□ -0.47
NID1-202ENST00000366595 C11orf71Q6IPW1 123 aa12.08□□□□□ -0.48
NID1-202ENST00000366595 ARHGAP21Q5T5U3 1957 aa12.08□□□□□ -0.48
NID1-202ENST00000366595 SPINK1P00995 79 aa12.08□□□□□ -0.48
NID1-202ENST00000366595 C2orf48Q96LS8 159 aa12.08□□□□□ -0.48
NID1-202ENST00000366595 URB1-AS1Q96HZ7 61 aa12.07□□□□□ -0.48
NID1-202ENST00000366595 FAM208BQ5VWN6 2430 aa12.07□□□□□ -0.48
NID1-202ENST00000366595 A0A1W2PNU3 283 aaPredicted RBP12.06□□□□□ -0.48
NID1-202ENST00000366595 C6orf223Q8N319 242 aa12.06□□□□□ -0.48
NID1-202ENST00000366595 C10orf99Q6UWK7 81 aa12.06□□□□□ -0.48
NID1-202ENST00000366595 PRR14LQ5THK1 2151 aa12.06□□□□□ -0.48
NID1-202ENST00000366595 TSPEAR-AS2P59090 65 aa12.05□□□□□ -0.48
NID1-202ENST00000366595 C1orf64Q8NEQ6 169 aa12.05□□□□□ -0.48
NID1-202ENST00000366595 LINC01006Q8NI28 216 aa12.05□□□□□ -0.48
NID1-202ENST00000366595 FRMPD3Q5JV73 1810 aa12.05□□□□□ -0.48
NID1-202ENST00000366595 NUP210Q8TEM1 1887 aaPredicted RBP12.05□□□□□ -0.48
NID1-202ENST00000366595 LINC00846Q9NV44 126 aa12.05□□□□□ -0.48
NID1-202ENST00000366595 M0R2N4 97 aa12.05□□□□□ -0.48
NID1-202ENST00000366595 SPAG11AQ6PDA7 123 aa12.05□□□□□ -0.48
NID1-202ENST00000366595 FREM1Q5H8C1 2179 aa12.05□□□□□ -0.48
NID1-202ENST00000366595 RPS28P62857 69 aaKnown RBP12.04□□□□□ -0.48
NID1-202ENST00000366595 INAFM1C9JVW0 142 aa12.04□□□□□ -0.48
NID1-202ENST00000366595 A0A1B0GU69 56 aa12.04□□□□□ -0.48
NID1-202ENST00000366595 ADAMTSL4-AS1Q5T5F5 129 aa12.04□□□□□ -0.48
NID1-202ENST00000366595 COX8CQ7Z4L0 72 aa12.04□□□□□ -0.48
NID1-202ENST00000366595 TP53AIP1Q9HCN2 124 aa12.03□□□□□ -0.48
NID1-202ENST00000366595 C19orf84I3L1E1 186 aa12.03□□□□□ -0.48
NID1-202ENST00000366595 C9orf116Q5BN46 136 aaPredicted RBP12.02□□□□□ -0.49
NID1-202ENST00000366595 COX6A2Q02221 97 aa12.02□□□□□ -0.49
NID1-202ENST00000366595 ANAPC1Q9H1A4 1944 aa12.02□□□□□ -0.49
NID1-202ENST00000366595 TANC1Q9C0D5 1861 aa12.01□□□□□ -0.49
NID1-202ENST00000366595 NUPR2A6NF83 97 aa12.01□□□□□ -0.49
NID1-202ENST00000366595 Q8N2B8 174 aa12.01□□□□□ -0.49
NID1-202ENST00000366595 PLXNB3Q9ULL4 1909 aa12.01□□□□□ -0.49
NID1-202ENST00000366595 A0A1B0GW54 56 aa12.01□□□□□ -0.49
NID1-202ENST00000366595 A0A1B0GUV1 79 aa12.01□□□□□ -0.49
NID1-202ENST00000366595 WISP2O76076 250 aa12□□□□□ -0.49
NID1-202ENST00000366595 LY6G6CO95867 125 aa12□□□□□ -0.49
NID1-202ENST00000366595 NCOA6Q14686 2063 aaPredicted RBP11.99□□□□□ -0.49
NID1-202ENST00000366595 H3BPC8 53 aa11.99□□□□□ -0.49
NID1-202ENST00000366595 ACYP2P14621 99 aa11.98□□□□□ -0.49
NID1-202ENST00000366595 PRR3P79522 188 aaKnown RBP11.98□□□□□ -0.49
NID1-202ENST00000366595 IGLV4-60A0A075B6I1 120 aa11.98□□□□□ -0.49
NID1-202ENST00000366595 ANKHD1Q8IWZ3 2542 aaKnown RBP11.97□□□□□ -0.49
NID1-202ENST00000366595 ODF3L2Q3SX64 289 aa11.97□□□□□ -0.49
NID1-202ENST00000366595 Q6ZTC4 211 aa11.96□□□□□ -0.49
NID1-202ENST00000366595 CDIP1Q9H305 208 aa11.96□□□□□ -0.49
NID1-202ENST00000366595 RETNLBQ9BQ08 111 aa11.96□□□□□ -0.5
NID1-202ENST00000366595 COL4A3Q01955 1670 aa11.95□□□□□ -0.5
NID1-202ENST00000366595 FHL2Q14192 279 aa11.95□□□□□ -0.5
NID1-202ENST00000366595 SBSPONQ8IVN8 264 aa11.95□□□□□ -0.5
NID1-202ENST00000366595 PRM2P04554 102 aa11.94□□□□□ -0.5
NID1-202ENST00000366595 PRRC2AP48634 2157 aaKnown RBP11.94□□□□□ -0.5
NID1-202ENST00000366595 IGLV5-52A0A0A0MRZ9 124 aa11.94□□□□□ -0.5
NID1-202ENST00000366595 LINC01556Q5JQF7 62 aa11.94□□□□□ -0.5
NID1-202ENST00000366595 DENND4CQ5VZ89 1909 aa11.94□□□□□ -0.5
NID1-202ENST00000366595 BRI3O95415 125 aa11.94□□□□□ -0.5
NID1-202ENST00000366595 C8orf87E5RJ46 101 aa11.93□□□□□ -0.5
NID1-202ENST00000366595 FSHBP01225 129 aa11.92□□□□□ -0.5
NID1-202ENST00000366595 ADAMTS9Q9P2N4 1935 aa11.92□□□□□ -0.5
NID1-202ENST00000366595 TMEM131Q92545 1883 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms