RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 C10orf126Q8N4M7 172 aa5.14□□□□□ -1.59
YBX3-204ENST00000366290 DEFB104AQ8WTQ1 72 aa5.14□□□□□ -1.59
YBX3-204ENST00000366290 GNB1LQ9BYB4 327 aa5.14□□□□□ -1.59
YBX3-204ENST00000366290 SMCO4Q9NRQ5 59 aa5.14□□□□□ -1.59
YBX3-204ENST00000366290 TRBV6-8A0A0A6YYG3 113 aa5.13□□□□□ -1.59
YBX3-204ENST00000366290 TRBV27A0A0K0K1C4 114 aa5.13□□□□□ -1.59
YBX3-204ENST00000366290 HLA-DQA1P01909 254 aa5.13□□□□□ -1.59
YBX3-204ENST00000366290 PPBPP02775 128 aa5.13□□□□□ -1.59
YBX3-204ENST00000366290 ORMDL3Q8N138 153 aa5.13□□□□□ -1.59
YBX3-204ENST00000366290 ST20Q9HBF5 79 aa5.13□□□□□ -1.59
YBX3-204ENST00000366290 TRAV8-6A0A0B4J262 113 aa5.12□□□□□ -1.59
YBX3-204ENST00000366290 IBA57-AS1B1ANH7 110 aa5.12□□□□□ -1.59
YBX3-204ENST00000366290 PHOX2AO14813 284 aa5.12□□□□□ -1.59
YBX3-204ENST00000366290 RPL32P62910 135 aaKnown RBP5.12□□□□□ -1.59
YBX3-204ENST00000366290 LAGE3Q14657 143 aa5.12□□□□□ -1.59
YBX3-204ENST00000366290 IQCJQ1A5X6 159 aa5.12□□□□□ -1.59
YBX3-204ENST00000366290 COX19Q49B96 90 aa5.12□□□□□ -1.59
YBX3-204ENST00000366290 NIT1Q86X76 327 aa5.12□□□□□ -1.59
YBX3-204ENST00000366290 PRELID3AQ96N28 172 aa5.12□□□□□ -1.59
YBX3-204ENST00000366290 C20orf78Q9BR46 151 aa5.12□□□□□ -1.59
YBX3-204ENST00000366290 COLCA2A8K830 154 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 C16orf90A8MZG2 172 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 F8WDY8 70 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 I3L3M4 83 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 PPP1R17O96001 155 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 APCSP02743 223 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 MT-ND6P03923 174 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 ESDP10768 282 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 DSCR10P59022 87 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 TMEM97Q5BJF2 176 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 SPATA12Q7Z6I5 190 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 CHCHD7Q9BUK0 85 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 SMIM2Q9BVW6 85 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 LAMTOR2Q9Y2Q5 125 aa5.11□□□□□ -1.59
YBX3-204ENST00000366290 TRBV25-1A0A075B6N4 114 aa5.1□□□□□ -1.59
YBX3-204ENST00000366290 IGHV1-24A0A0C4DH33 117 aa5.1□□□□□ -1.59
YBX3-204ENST00000366290 PMCHP20382 165 aa5.1□□□□□ -1.59
YBX3-204ENST00000366290 COTL1Q14019 142 aa5.1□□□□□ -1.59
YBX3-204ENST00000366290 MPV17L2Q567V2 206 aa5.1□□□□□ -1.59
YBX3-204ENST00000366290 TRAPPC1Q9Y5R8 145 aa5.1□□□□□ -1.59
YBX3-204ENST00000366290 HERC1Q15751 4861 aa5.09□□□□□ -1.59
YBX3-204ENST00000366290 A0A087WTM6 91 aa5.09□□□□□ -1.59
YBX3-204ENST00000366290 IGHV3-30P01768 117 aa5.09□□□□□ -1.59
YBX3-204ENST00000366290 IGHV3-33P01772 117 aa5.09□□□□□ -1.59
YBX3-204ENST00000366290 IGHV3-30-3P0DP02 117 aa5.09□□□□□ -1.59
YBX3-204ENST00000366290 IGHV3-30-5P0DP03 117 aa5.09□□□□□ -1.59
YBX3-204ENST00000366290 S100A1P23297 94 aa5.09□□□□□ -1.59
YBX3-204ENST00000366290 FABP9Q0Z7S8 132 aa5.09□□□□□ -1.59
YBX3-204ENST00000366290 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.09□□□□□ -1.59
YBX3-204ENST00000366290 TMEM243Q9BU79 118 aa5.09□□□□□ -1.59
YBX3-204ENST00000366290 DNAH8Q96JB1 4490 aa5.09□□□□□ -1.59
YBX3-204ENST00000366290 FAT1Q14517 4588 aa5.08□□□□□ -1.6
YBX3-204ENST00000366290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.08□□□□□ -1.6
YBX3-204ENST00000366290 LOC389332A0A1B0GUA5 103 aa5.08□□□□□ -1.6
YBX3-204ENST00000366290 IGKV2-29A2NJV5 120 aaPredicted RBP5.08□□□□□ -1.6
YBX3-204ENST00000366290 LRCOL1A6NCL2 159 aa5.08□□□□□ -1.6
YBX3-204ENST00000366290 TCAPO15273 167 aa5.08□□□□□ -1.6
YBX3-204ENST00000366290 RBX1P62877 108 aa5.08□□□□□ -1.6
YBX3-204ENST00000366290 ERASQ7Z444 233 aa5.08□□□□□ -1.6
YBX3-204ENST00000366290 Q8N8P6 123 aa5.08□□□□□ -1.6
YBX3-204ENST00000366290 Q8N976 141 aa5.08□□□□□ -1.6
YBX3-204ENST00000366290 C20orf203Q8NBC4 194 aa5.08□□□□□ -1.6
YBX3-204ENST00000366290 MAP1LC3AQ9H492 121 aa5.08□□□□□ -1.6
YBX3-204ENST00000366290 IGLV4-60A0A075B6I1 120 aa5.07□□□□□ -1.6
YBX3-204ENST00000366290 TRAV8-3A0A0A6YYJ7 113 aa5.07□□□□□ -1.6
YBX3-204ENST00000366290 LINC01546A6NGU7 62 aa5.07□□□□□ -1.6
YBX3-204ENST00000366290 TRGC2P03986 189 aa5.07□□□□□ -1.6
YBX3-204ENST00000366290 RAB5AP20339 215 aa5.07□□□□□ -1.6
YBX3-204ENST00000366290 IFI27P40305 119 aaPredicted RBP5.07□□□□□ -1.6
YBX3-204ENST00000366290 C18orf32Q8TCD1 76 aa5.07□□□□□ -1.6
YBX3-204ENST00000366290 FAM104AQ969W3 186 aa5.07□□□□□ -1.6
YBX3-204ENST00000366290 KIR2DL4Q99706 377 aa5.07□□□□□ -1.6
YBX3-204ENST00000366290 A0A087WX48 190 aa5.06□□□□□ -1.6
YBX3-204ENST00000366290 TMEM262E9PQX1 116 aa5.06□□□□□ -1.6
YBX3-204ENST00000366290 FGF6P10767 208 aa5.06□□□□□ -1.6
YBX3-204ENST00000366290 FCER1GP30273 86 aa5.06□□□□□ -1.6
YBX3-204ENST00000366290 RPL39P62891 51 aaKnown RBP5.06□□□□□ -1.6
YBX3-204ENST00000366290 TYMSOSQ8TAI1 123 aa5.06□□□□□ -1.6
YBX3-204ENST00000366290 NXT2Q9NPJ8 142 aaKnown RBP5.06□□□□□ -1.6
YBX3-204ENST00000366290 KLK12Q9UKR0 248 aa5.06□□□□□ -1.6
YBX3-204ENST00000366290 UBE2L6O14933 153 aa5.05□□□□□ -1.6
YBX3-204ENST00000366290 PKIAP61925 76 aa5.05□□□□□ -1.6
YBX3-204ENST00000366290 Q1RN00 199 aa5.05□□□□□ -1.6
YBX3-204ENST00000366290 ENHOQ6UWT2 76 aa5.05□□□□□ -1.6
YBX3-204ENST00000366290 MRPL52Q86TS9 123 aaKnown RBP5.05□□□□□ -1.6
YBX3-204ENST00000366290 PRR34Q9NV39 138 aa5.05□□□□□ -1.6
YBX3-204ENST00000366290 UBE2D4Q9Y2X8 147 aa5.05□□□□□ -1.6
YBX3-204ENST00000366290 A0A096LNJ9 63 aa5.04□□□□□ -1.6
YBX3-204ENST00000366290 K7EMI3 77 aa5.04□□□□□ -1.6
YBX3-204ENST00000366290 PSCAO43653 123 aa5.04□□□□□ -1.6
YBX3-204ENST00000366290 ANGP03950 147 aaKnown RBP5.04□□□□□ -1.6
YBX3-204ENST00000366290 ZNF25P17030 456 aaPredicted RBP5.04□□□□□ -1.6
YBX3-204ENST00000366290 KRTAP26-1Q6PEX3 210 aa5.04□□□□□ -1.6
YBX3-204ENST00000366290 CLPSL2Q6UWE3 100 aa5.04□□□□□ -1.6
YBX3-204ENST00000366290 LINC00269Q8N2A0 174 aa5.04□□□□□ -1.6
YBX3-204ENST00000366290 Q8N814 137 aa5.04□□□□□ -1.6
YBX3-204ENST00000366290 UBE2WQ96B02 151 aa5.04□□□□□ -1.6
YBX3-204ENST00000366290 CSDC2Q9Y534 153 aaKnown RBP5.04□□□□□ -1.6
YBX3-204ENST00000366290 Q0VG73 95 aa5.03□□□□□ -1.6
YBX3-204ENST00000366290 RNASEKQ6P5S7 137 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms