RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 VSTM2AQ8TAG5 236 aa-1.78□□□□□ -2.69
RNU6-553P-201ENST00000364047 TP53AIP1Q9HCN2 124 aa-1.78□□□□□ -2.69
RNU6-553P-201ENST00000364047 CASKIN1Q8WXD9 1431 aa-1.78□□□□□ -2.69
RNU6-553P-201ENST00000364047 ADGRB1O14514 1584 aa-1.79□□□□□ -2.7
RNU6-553P-201ENST00000364047 MBD5Q9P267 1494 aa-1.79□□□□□ -2.7
RNU6-553P-201ENST00000364047 TRBV20-1A0A075B6N2 111 aa-1.79□□□□□ -2.7
RNU6-553P-201ENST00000364047 PIRTP0C851 137 aa-1.79□□□□□ -2.7
RNU6-553P-201ENST00000364047 S100A3P33764 101 aa-1.79□□□□□ -2.7
RNU6-553P-201ENST00000364047 SPAG11AQ6PDA7 123 aa-1.79□□□□□ -2.7
RNU6-553P-201ENST00000364047 DPH3Q96FX2 82 aa-1.79□□□□□ -2.7
RNU6-553P-201ENST00000364047 V9GYQ6 96 aa-1.79□□□□□ -2.7
RNU6-553P-201ENST00000364047 KDM5AP29375 1690 aaKnown RBP-1.8□□□□□ -2.7
RNU6-553P-201ENST00000364047 ALKQ9UM73 1620 aa-1.8□□□□□ -2.7
RNU6-553P-201ENST00000364047 TROQ12816 1431 aaPredicted RBP-1.8□□□□□ -2.7
RNU6-553P-201ENST00000364047 A6NIN4 97 aa-1.8□□□□□ -2.7
RNU6-553P-201ENST00000364047 FABP1P07148 127 aa-1.8□□□□□ -2.7
RNU6-553P-201ENST00000364047 IFNA17P01571 189 aa-1.81□□□□□ -2.7
RNU6-553P-201ENST00000364047 PTPN23Q9H3S7 1636 aa-1.81□□□□□ -2.7
RNU6-553P-201ENST00000364047 SIPA1L3O60292 1781 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-553P-201ENST00000364047 PAPPA2Q9BXP8 1791 aa-1.82□□□□□ -2.7
RNU6-553P-201ENST00000364047 UBE2G1P62253 170 aa-1.82□□□□□ -2.7
RNU6-553P-201ENST00000364047 MIC13Q5XKP0 118 aa-1.82□□□□□ -2.7
RNU6-553P-201ENST00000364047 LINC01600Q96MT4 127 aa-1.82□□□□□ -2.7
RNU6-553P-201ENST00000364047 ADAMTS12P58397 1594 aa-1.82□□□□□ -2.7
RNU6-553P-201ENST00000364047 PPIP5K1Q6PFW1 1433 aa-1.83□□□□□ -2.7
RNU6-553P-201ENST00000364047 IFT172Q9UG01 1749 aa-1.83□□□□□ -2.7
RNU6-553P-201ENST00000364047 NCS1P62166 190 aa-1.83□□□□□ -2.7
RNU6-553P-201ENST00000364047 DDA1Q9BW61 102 aa-1.83□□□□□ -2.7
RNU6-553P-201ENST00000364047 ARFGEF1Q9Y6D6 1849 aa-1.83□□□□□ -2.7
RNU6-553P-201ENST00000364047 CDC42BPAQ5VT25 1732 aa-1.83□□□□□ -2.7
RNU6-553P-201ENST00000364047 MARF1Q9Y4F3 1742 aaKnown RBP-1.83□□□□□ -2.7
RNU6-553P-201ENST00000364047 PARP14Q460N5 1801 aa-1.84□□□□□ -2.7
RNU6-553P-201ENST00000364047 TSTD3H0UI37 97 aa-1.84□□□□□ -2.7
RNU6-553P-201ENST00000364047 SAR1AQ9NR31 198 aa-1.84□□□□□ -2.7
RNU6-553P-201ENST00000364047 HSPB11Q9Y547 144 aa-1.84□□□□□ -2.7
RNU6-553P-201ENST00000364047 PRDM2Q13029 1718 aa-1.85□□□□□ -2.71
RNU6-553P-201ENST00000364047 I3L2K1 104 aa-1.85□□□□□ -2.71
RNU6-553P-201ENST00000364047 DEFB135Q30KP9 77 aa-1.85□□□□□ -2.71
RNU6-553P-201ENST00000364047 DEFB110Q30KQ9 67 aa-1.85□□□□□ -2.71
RNU6-553P-201ENST00000364047 GINS2Q9Y248 185 aa-1.85□□□□□ -2.71
RNU6-553P-201ENST00000364047 MUC22E2RYF6 1773 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-553P-201ENST00000364047 ZNF818PQ6ZRF7 136 aa-1.86□□□□□ -2.71
RNU6-553P-201ENST00000364047 ERCC6L2Q5T890 1561 aa-1.86□□□□□ -2.71
RNU6-553P-201ENST00000364047 LRP6O75581 1613 aa-1.87□□□□□ -2.71
RNU6-553P-201ENST00000364047 TRBV6-1A0A0K0K1D8 114 aa-1.87□□□□□ -2.71
RNU6-553P-201ENST00000364047 SPTSSBQ8NFR3 76 aa-1.87□□□□□ -2.71
RNU6-553P-201ENST00000364047 LINC00312Q9Y6C7 94 aa-1.87□□□□□ -2.71
RNU6-553P-201ENST00000364047 ATP10BO94823 1461 aa-1.88□□□□□ -2.71
RNU6-553P-201ENST00000364047 PHLPP1O60346 1717 aa-1.88□□□□□ -2.71
RNU6-553P-201ENST00000364047 ANKRD50Q9ULJ7 1429 aa-1.88□□□□□ -2.71
RNU6-553P-201ENST00000364047 XIRP1Q702N8 1843 aaKnown RBP-1.88□□□□□ -2.71
RNU6-553P-201ENST00000364047 M0R129 80 aa-1.88□□□□□ -2.71
RNU6-553P-201ENST00000364047 PBRM1Q86U86 1689 aa-1.88□□□□□ -2.71
RNU6-553P-201ENST00000364047 H0YJX3 145 aa-1.89□□□□□ -2.71
RNU6-553P-201ENST00000364047 SSSCA1O60232 199 aa-1.89□□□□□ -2.71
RNU6-553P-201ENST00000364047 PIGYQ3MUY2 71 aa-1.89□□□□□ -2.71
RNU6-553P-201ENST00000364047 CCDC153Q494R4 210 aa-1.89□□□□□ -2.71
RNU6-553P-201ENST00000364047 CLPSL2Q6UWE3 100 aa-1.89□□□□□ -2.71
RNU6-553P-201ENST00000364047 DEFB104AQ8WTQ1 72 aa-1.89□□□□□ -2.71
RNU6-553P-201ENST00000364047 SPANXCQ9NY87 97 aa-1.89□□□□□ -2.71
RNU6-553P-201ENST00000364047 ARHGEF10O15013 1369 aa-1.89□□□□□ -2.71
RNU6-553P-201ENST00000364047 PAPPAQ13219 1627 aa-1.9□□□□□ -2.71
RNU6-553P-201ENST00000364047 SPRR1BP22528 89 aa-1.9□□□□□ -2.71
RNU6-553P-201ENST00000364047 CCL18P55774 89 aa-1.9□□□□□ -2.71
RNU6-553P-201ENST00000364047 MMGT1Q8N4V1 131 aa-1.9□□□□□ -2.71
RNU6-553P-201ENST00000364047 ZNF236Q9UL36 1845 aa-1.9□□□□□ -2.71
RNU6-553P-201ENST00000364047 MAGI2Q86UL8 1455 aa-1.9□□□□□ -2.71
RNU6-553P-201ENST00000364047 A0A087WVE0 104 aa-1.91□□□□□ -2.72
RNU6-553P-201ENST00000364047 C9orf92A6NGG3 77 aa-1.91□□□□□ -2.72
RNU6-553P-201ENST00000364047 SMIM15Q7Z3B0 74 aa-1.91□□□□□ -2.72
RNU6-553P-201ENST00000364047 CTAGE3PQ8IX95 158 aa-1.91□□□□□ -2.72
RNU6-553P-201ENST00000364047 SMIM4Q8WVI0 70 aa-1.91□□□□□ -2.72
RNU6-553P-201ENST00000364047 LRRC37A3O60309 1634 aa-1.91□□□□□ -2.72
RNU6-553P-201ENST00000364047 DAPK1P53355 1430 aa-1.91□□□□□ -2.72
RNU6-553P-201ENST00000364047 KDM3BQ7LBC6 1761 aa-1.92□□□□□ -2.72
RNU6-553P-201ENST00000364047 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.92□□□□□ -2.72
RNU6-553P-201ENST00000364047 DBIP07108 87 aaKnown RBP-1.92□□□□□ -2.72
RNU6-553P-201ENST00000364047 CBLN1P23435 193 aa-1.92□□□□□ -2.72
RNU6-553P-201ENST00000364047 WNK3Q9BYP7 1800 aa-1.92□□□□□ -2.72
RNU6-553P-201ENST00000364047 FAM236AA0A1B0GUQ0 79 aa-1.93□□□□□ -2.72
RNU6-553P-201ENST00000364047 FAM236BA0A1B0GV22 79 aa-1.93□□□□□ -2.72
RNU6-553P-201ENST00000364047 IL5P05113 134 aa-1.93□□□□□ -2.72
RNU6-553P-201ENST00000364047 PIPP12273 146 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-553P-201ENST00000364047 COX6B1P14854 86 aa-1.93□□□□□ -2.72
RNU6-553P-201ENST00000364047 DEFB136Q30KP8 78 aa-1.93□□□□□ -2.72
RNU6-553P-201ENST00000364047 TTTY10Q9BZA0 68 aa-1.93□□□□□ -2.72
RNU6-553P-201ENST00000364047 LINC00472Q9H8W2 130 aa-1.93□□□□□ -2.72
RNU6-553P-201ENST00000364047 R4GMQ9 66 aa-1.93□□□□□ -2.72
RNU6-553P-201ENST00000364047 MAP3K1Q13233 1512 aa-1.93□□□□□ -2.72
RNU6-553P-201ENST00000364047 M0R135 149 aa-1.94□□□□□ -2.72
RNU6-553P-201ENST00000364047 PPP1R17O96001 155 aa-1.94□□□□□ -2.72
RNU6-553P-201ENST00000364047 MORN2Q502X0 79 aa-1.94□□□□□ -2.72
RNU6-553P-201ENST00000364047 SELENOSQ9BQE4 189 aa-1.94□□□□□ -2.72
RNU6-553P-201ENST00000364047 SLIT1O75093 1534 aa-1.95□□□□□ -2.72
RNU6-553P-201ENST00000364047 PLXNB2O15031 1838 aa-1.95□□□□□ -2.72
RNU6-553P-201ENST00000364047 PITX3O75364 302 aa-1.95□□□□□ -2.72
RNU6-553P-201ENST00000364047 PSMG3Q9BT73 122 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-553P-201ENST00000364047 PLXNC1O60486 1568 aa-1.96□□□□□ -2.72
RNU6-553P-201ENST00000364047 CTXND1A0A1B0GTU2 59 aa-1.96□□□□□ -2.72
RNU6-553P-201ENST00000364047 CCL8P80075 99 aa-1.96□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms