RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 SMIM20Q8N5G0 67 aa7.68□□□□□ -1.18
CACNA1S-201ENST00000362061 CCKP06307 115 aa7.68□□□□□ -1.18
CACNA1S-201ENST00000362061 ARHGAP32A7KAX9 2087 aa7.68□□□□□ -1.18
CACNA1S-201ENST00000362061 A8MZ25 164 aa7.68□□□□□ -1.18
CACNA1S-201ENST00000362061 TCL1BO95988 128 aa7.68□□□□□ -1.18
CACNA1S-201ENST00000362061 RNF185Q96GF1 192 aa7.68□□□□□ -1.18
CACNA1S-201ENST00000362061 C11orf21Q9P2W6 132 aa7.67□□□□□ -1.18
CACNA1S-201ENST00000362061 PCNX3Q9H6A9 2034 aa7.67□□□□□ -1.18
CACNA1S-201ENST00000362061 G3V4G9 280 aa7.67□□□□□ -1.18
CACNA1S-201ENST00000362061 SCXQ7RTU7 201 aa7.67□□□□□ -1.18
CACNA1S-201ENST00000362061 M0QXV9 152 aa7.67□□□□□ -1.18
CACNA1S-201ENST00000362061 CYSRT1A8MQ03 144 aa7.67□□□□□ -1.18
CACNA1S-201ENST00000362061 IGLV2-11P01706 119 aa7.66□□□□□ -1.18
CACNA1S-201ENST00000362061 C3orf84H3BNL1 204 aa7.66□□□□□ -1.18
CACNA1S-201ENST00000362061 CHCHD7Q9BUK0 85 aa7.66□□□□□ -1.18
CACNA1S-201ENST00000362061 TLN2Q9Y4G6 2542 aa7.66□□□□□ -1.18
CACNA1S-201ENST00000362061 PLXNB1O43157 2135 aa7.66□□□□□ -1.18
CACNA1S-201ENST00000362061 Q6ZQY7 126 aa7.65□□□□□ -1.18
CACNA1S-201ENST00000362061 KIAA1549Q9HCM3 1950 aa7.65□□□□□ -1.19
CACNA1S-201ENST00000362061 C6orf223Q8N319 242 aa7.65□□□□□ -1.19
CACNA1S-201ENST00000362061 MRPS36P82909 103 aaKnown RBP7.65□□□□□ -1.19
CACNA1S-201ENST00000362061 TEX49A0A1B0GTD5 131 aa7.64□□□□□ -1.19
CACNA1S-201ENST00000362061 FN1P02751 2386 aaKnown RBP7.64□□□□□ -1.19
CACNA1S-201ENST00000362061 TANC2Q9HCD6 1990 aa7.64□□□□□ -1.19
CACNA1S-201ENST00000362061 CRIP2P52943 208 aaPredicted RBP7.64□□□□□ -1.19
CACNA1S-201ENST00000362061 PTH2Q96A98 100 aa7.64□□□□□ -1.19
CACNA1S-201ENST00000362061 NUP210LQ5VU65 1888 aa7.64□□□□□ -1.19
CACNA1S-201ENST00000362061 CEP295Q9C0D2 2601 aa7.64□□□□□ -1.19
CACNA1S-201ENST00000362061 K7ERS5 55 aa7.64□□□□□ -1.19
CACNA1S-201ENST00000362061 CDC42SE2Q9NRR3 84 aa7.64□□□□□ -1.19
CACNA1S-201ENST00000362061 Q8IZM0 81 aa7.63□□□□□ -1.19
CACNA1S-201ENST00000362061 CIRBP-AS1Q8TBR5 109 aa7.63□□□□□ -1.19
CACNA1S-201ENST00000362061 FASNP49327 2511 aaKnown RBP7.63□□□□□ -1.19
CACNA1S-201ENST00000362061 ZNF73O43830 326 aaPredicted RBP7.63□□□□□ -1.19
CACNA1S-201ENST00000362061 COX17Q14061 63 aa7.63□□□□□ -1.19
CACNA1S-201ENST00000362061 UNQ6190/PRO20217Q6UXQ8 127 aa7.62□□□□□ -1.19
CACNA1S-201ENST00000362061 USP9XQ93008 2570 aaPredicted RBP7.62□□□□□ -1.19
CACNA1S-201ENST00000362061 POLR2KP53803 58 aaKnown RBP7.62□□□□□ -1.19
CACNA1S-201ENST00000362061 NRACQ8N912 160 aa7.62□□□□□ -1.19
CACNA1S-201ENST00000362061 MUC22E2RYF6 1773 aaPredicted RBP7.62□□□□□ -1.19
CACNA1S-201ENST00000362061 EGFEM1PQ0D2K5 195 aa7.62□□□□□ -1.19
CACNA1S-201ENST00000362061 LINC01556Q5JQF7 62 aa7.62□□□□□ -1.19
CACNA1S-201ENST00000362061 C1orf137Q5JT78 98 aa7.62□□□□□ -1.19
CACNA1S-201ENST00000362061 ANKRD11Q6UB99 2663 aaPredicted RBP7.62□□□□□ -1.19
CACNA1S-201ENST00000362061 C10orf25Q5T742 122 aa7.61□□□□□ -1.19
CACNA1S-201ENST00000362061 TAX1BP3O14907 124 aa7.61□□□□□ -1.19
CACNA1S-201ENST00000362061 FHL3Q13643 280 aa7.61□□□□□ -1.19
CACNA1S-201ENST00000362061 TRBV30A0A0K0K1B3 111 aa7.61□□□□□ -1.19
CACNA1S-201ENST00000362061 FHL2Q14192 279 aa7.61□□□□□ -1.19
CACNA1S-201ENST00000362061 LINC00643Q86TS7 51 aa7.6□□□□□ -1.19
CACNA1S-201ENST00000362061 WFDC13Q8IUB5 93 aa7.6□□□□□ -1.19
CACNA1S-201ENST00000362061 B5MCH6 92 aa7.6□□□□□ -1.19
CACNA1S-201ENST00000362061 ZNF580Q9UK33 172 aa7.6□□□□□ -1.19
CACNA1S-201ENST00000362061 NDUFC2O95298 119 aa7.6□□□□□ -1.19
CACNA1S-201ENST00000362061 C3orf22Q8N5N4 141 aa7.59□□□□□ -1.19
CACNA1S-201ENST00000362061 MUC7Q8TAX7 377 aa7.59□□□□□ -1.19
CACNA1S-201ENST00000362061 TIMM17BO60830 172 aa7.59□□□□□ -1.19
CACNA1S-201ENST00000362061 TRIAP1O43715 76 aa7.59□□□□□ -1.19
CACNA1S-201ENST00000362061 COX6A2Q02221 97 aa7.59□□□□□ -1.19
CACNA1S-201ENST00000362061 MAPKAPK5-AS1Q8N8E1 139 aa7.59□□□□□ -1.19
CACNA1S-201ENST00000362061 REG3GQ6UW15 175 aa7.59□□□□□ -1.2
CACNA1S-201ENST00000362061 ENHOQ6UWT2 76 aa7.58□□□□□ -1.2
CACNA1S-201ENST00000362061 RNASE8Q8TDE3 154 aaKnown RBP7.58□□□□□ -1.2
CACNA1S-201ENST00000362061 LRP4O75096 1905 aa7.58□□□□□ -1.2
CACNA1S-201ENST00000362061 C9orf116Q5BN46 136 aaPredicted RBP7.58□□□□□ -1.2
CACNA1S-201ENST00000362061 LYPD5Q6UWN5 251 aa7.58□□□□□ -1.2
CACNA1S-201ENST00000362061 SDIM1Q6ZPB5 146 aa7.58□□□□□ -1.2
CACNA1S-201ENST00000362061 COL5A1P20908 1838 aaPredicted RBP7.57□□□□□ -1.2
CACNA1S-201ENST00000362061 MDFIQ99750 246 aa7.57□□□□□ -1.2
CACNA1S-201ENST00000362061 SPTBN4Q9H254 2564 aa7.57□□□□□ -1.2
CACNA1S-201ENST00000362061 IGLV4-60A0A075B6I1 120 aa7.57□□□□□ -1.2
CACNA1S-201ENST00000362061 SMIM11BQ8TCY0 68 aa7.57□□□□□ -1.2
CACNA1S-201ENST00000362061 KRTAP24-1Q3LI83 254 aa7.56□□□□□ -1.2
CACNA1S-201ENST00000362061 LINC00242Q5T6M2 205 aa7.56□□□□□ -1.2
CACNA1S-201ENST00000362061 SETD2Q9BYW2 2564 aaPredicted RBP7.56□□□□□ -1.2
CACNA1S-201ENST00000362061 GAS8-AS1O95177 125 aa7.56□□□□□ -1.2
CACNA1S-201ENST00000362061 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.55□□□□□ -1.2
CACNA1S-201ENST00000362061 LST1O00453 97 aa7.55□□□□□ -1.2
CACNA1S-201ENST00000362061 ATP5EP2Q5VTU8 51 aa7.54□□□□□ -1.2
CACNA1S-201ENST00000362061 RAI1Q7Z5J4 1906 aaPredicted RBP7.54□□□□□ -1.2
CACNA1S-201ENST00000362061 SRCAPQ6ZRS2 3230 aa7.54□□□□□ -1.2
CACNA1S-201ENST00000362061 MRPS12O15235 138 aaKnown RBP7.54□□□□□ -1.2
CACNA1S-201ENST00000362061 POM121L12Q8N7R1 296 aa7.54□□□□□ -1.2
CACNA1S-201ENST00000362061 NDUFV3P56181 108 aaKnown RBP7.53□□□□□ -1.2
CACNA1S-201ENST00000362061 TRBV10-3A0A0K0K1G6 114 aa7.53□□□□□ -1.2
CACNA1S-201ENST00000362061 USP9YO00507 2555 aaPredicted RBP7.53□□□□□ -1.2
CACNA1S-201ENST00000362061 LINC00694P0DN24 101 aa7.53□□□□□ -1.2
CACNA1S-201ENST00000362061 C20orf197Q8N268 126 aa7.53□□□□□ -1.2
CACNA1S-201ENST00000362061 FAM236DA0A1B0GTK5 79 aa7.53□□□□□ -1.2
CACNA1S-201ENST00000362061 FAM236CP0DP71 79 aa7.53□□□□□ -1.2
CACNA1S-201ENST00000362061 Q6ZVQ6 151 aa7.52□□□□□ -1.21
CACNA1S-201ENST00000362061 Q8N9L7 120 aa7.52□□□□□ -1.21
CACNA1S-201ENST00000362061 SPTSSBQ8NFR3 76 aa7.52□□□□□ -1.21
CACNA1S-201ENST00000362061 EXPH5Q8NEV8 1989 aa7.52□□□□□ -1.21
CACNA1S-201ENST00000362061 NDUFC2-KCTD14E9PQ53 114 aa7.52□□□□□ -1.21
CACNA1S-201ENST00000362061 CNFNQ9BYD5 112 aa7.51□□□□□ -1.21
CACNA1S-201ENST00000362061 SERP1Q9Y6X1 66 aa7.51□□□□□ -1.21
CACNA1S-201ENST00000362061 MRPL55Q7Z7F7 128 aaKnown RBP7.51□□□□□ -1.21
CACNA1S-201ENST00000362061 Q8N2B8 174 aa7.51□□□□□ -1.21
CACNA1S-201ENST00000362061 CELA1Q9UNI1 258 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms