RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SLPIP03973 132 aa8.01□□□□□ -1.13
CLIP1-203ENST00000361654 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
CLIP1-203ENST00000361654 Q6ZVQ6 151 aa8□□□□□ -1.13
CLIP1-203ENST00000361654 J3KT08 172 aa8□□□□□ -1.13
CLIP1-203ENST00000361654 LST1O00453 97 aa8□□□□□ -1.13
CLIP1-203ENST00000361654 BRWD1-AS2P59051 145 aa8□□□□□ -1.13
CLIP1-203ENST00000361654 CIRBP-AS1Q8TBR5 109 aa8□□□□□ -1.13
CLIP1-203ENST00000361654 AVPP01185 164 aa8□□□□□ -1.13
CLIP1-203ENST00000361654 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8□□□□□ -1.13
CLIP1-203ENST00000361654 BRI3O95415 125 aa7.99□□□□□ -1.13
CLIP1-203ENST00000361654 Q6ZS46 218 aa7.99□□□□□ -1.13
CLIP1-203ENST00000361654 C1orf229Q6ZS94 237 aaPredicted RBP7.99□□□□□ -1.13
CLIP1-203ENST00000361654 WFDC13Q8IUB5 93 aa7.99□□□□□ -1.13
CLIP1-203ENST00000361654 MRPL55Q7Z7F7 128 aaKnown RBP7.99□□□□□ -1.13
CLIP1-203ENST00000361654 CYSRT1A8MQ03 144 aa7.99□□□□□ -1.13
CLIP1-203ENST00000361654 F8WDY8 70 aa7.99□□□□□ -1.13
CLIP1-203ENST00000361654 ODF3L2Q3SX64 289 aa7.99□□□□□ -1.13
CLIP1-203ENST00000361654 TSHBP01222 138 aa7.98□□□□□ -1.13
CLIP1-203ENST00000361654 Q6ZTC4 211 aa7.98□□□□□ -1.13
CLIP1-203ENST00000361654 PRYO14603 147 aa7.97□□□□□ -1.13
CLIP1-203ENST00000361654 RNASE3P12724 160 aaKnown RBP7.97□□□□□ -1.13
CLIP1-203ENST00000361654 C2orf16Q68DN1 1984 aa7.97□□□□□ -1.13
CLIP1-203ENST00000361654 EIF4EBP1Q13541 118 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-203ENST00000361654 C1orf137Q5JT78 98 aa7.97□□□□□ -1.13
CLIP1-203ENST00000361654 PTH2Q96A98 100 aa7.97□□□□□ -1.13
CLIP1-203ENST00000361654 PCNX3Q9H6A9 2034 aa7.97□□□□□ -1.13
CLIP1-203ENST00000361654 REG3GQ6UW15 175 aa7.97□□□□□ -1.13
CLIP1-203ENST00000361654 V9GYY9 64 aa7.97□□□□□ -1.13
CLIP1-203ENST00000361654 ENHOQ6UWT2 76 aa7.97□□□□□ -1.13
CLIP1-203ENST00000361654 LINC00337Q8N6G1 96 aa7.97□□□□□ -1.13
CLIP1-203ENST00000361654 MT-ATP8P03928 68 aa7.96□□□□□ -1.13
CLIP1-203ENST00000361654 C6orf223Q8N319 242 aa7.96□□□□□ -1.13
CLIP1-203ENST00000361654 LINC01556Q5JQF7 62 aa7.96□□□□□ -1.14
CLIP1-203ENST00000361654 C20orf197Q8N268 126 aa7.96□□□□□ -1.14
CLIP1-203ENST00000361654 IGF2RP11717 2491 aa7.95□□□□□ -1.14
CLIP1-203ENST00000361654 Q6JHZ5 121 aa7.95□□□□□ -1.14
CLIP1-203ENST00000361654 CDSNQ15517 529 aa7.95□□□□□ -1.14
CLIP1-203ENST00000361654 C2orf91Q6ZV80 131 aa7.95□□□□□ -1.14
CLIP1-203ENST00000361654 JMJD1CQ15652 2540 aa7.95□□□□□ -1.14
CLIP1-203ENST00000361654 FAM19A3Q7Z5A8 133 aa7.95□□□□□ -1.14
CLIP1-203ENST00000361654 CDC42SE2Q9NRR3 84 aa7.95□□□□□ -1.14
CLIP1-203ENST00000361654 DSCAML1Q8TD84 2053 aa7.95□□□□□ -1.14
CLIP1-203ENST00000361654 LIMD2Q9BT23 127 aa7.94□□□□□ -1.14
CLIP1-203ENST00000361654 NUP210LQ5VU65 1888 aa7.94□□□□□ -1.14
CLIP1-203ENST00000361654 ZNF580Q9UK33 172 aa7.94□□□□□ -1.14
CLIP1-203ENST00000361654 LTBP2Q14767 1821 aa7.94□□□□□ -1.14
CLIP1-203ENST00000361654 CRIP1P50238 77 aa7.94□□□□□ -1.14
CLIP1-203ENST00000361654 SDIM1Q6ZPB5 146 aa7.94□□□□□ -1.14
CLIP1-203ENST00000361654 RNF185Q96GF1 192 aa7.93□□□□□ -1.14
CLIP1-203ENST00000361654 IGLV2-11P01706 119 aa7.93□□□□□ -1.14
CLIP1-203ENST00000361654 NDUFV3P56181 108 aaKnown RBP7.93□□□□□ -1.14
CLIP1-203ENST00000361654 CRIP2P52943 208 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-203ENST00000361654 POLR2KP53803 58 aaKnown RBP7.92□□□□□ -1.14
CLIP1-203ENST00000361654 BRK1Q8WUW1 75 aa7.92□□□□□ -1.14
CLIP1-203ENST00000361654 TRIAP1O43715 76 aa7.92□□□□□ -1.14
CLIP1-203ENST00000361654 UNQ6190/PRO20217Q6UXQ8 127 aa7.92□□□□□ -1.14
CLIP1-203ENST00000361654 MYO9AB2RTY4 2548 aa7.92□□□□□ -1.14
CLIP1-203ENST00000361654 MED12LQ86YW9 2145 aa7.91□□□□□ -1.14
CLIP1-203ENST00000361654 NDUFC1O43677 76 aa7.91□□□□□ -1.14
CLIP1-203ENST00000361654 C2CD3Q4AC94 2353 aa7.91□□□□□ -1.14
CLIP1-203ENST00000361654 PRR9Q5T870 116 aa7.91□□□□□ -1.14
CLIP1-203ENST00000361654 FAM229AH3BQW9 127 aa7.9□□□□□ -1.14
CLIP1-203ENST00000361654 ATP5EP56381 51 aaPredicted RBP7.9□□□□□ -1.14
CLIP1-203ENST00000361654 SERP2Q8N6R1 65 aa7.9□□□□□ -1.14
CLIP1-203ENST00000361654 CHD8Q9HCK8 2581 aa7.9□□□□□ -1.14
CLIP1-203ENST00000361654 ESRGQ1W209 222 aa7.9□□□□□ -1.15
CLIP1-203ENST00000361654 C2orf48Q96LS8 159 aa7.9□□□□□ -1.15
CLIP1-203ENST00000361654 PRM2P04554 102 aa7.89□□□□□ -1.15
CLIP1-203ENST00000361654 SMIM11BQ8TCY0 68 aa7.89□□□□□ -1.15
CLIP1-203ENST00000361654 ZFYVE26Q68DK2 2539 aa7.89□□□□□ -1.15
CLIP1-203ENST00000361654 A8MZ25 164 aa7.89□□□□□ -1.15
CLIP1-203ENST00000361654 FHL3Q13643 280 aa7.89□□□□□ -1.15
CLIP1-203ENST00000361654 COX6A2Q02221 97 aa7.89□□□□□ -1.15
CLIP1-203ENST00000361654 NRACQ8N912 160 aa7.89□□□□□ -1.15
CLIP1-203ENST00000361654 FHL2Q14192 279 aa7.88□□□□□ -1.15
CLIP1-203ENST00000361654 UQCRQO14949 82 aa7.88□□□□□ -1.15
CLIP1-203ENST00000361654 C11orf21Q9P2W6 132 aa7.87□□□□□ -1.15
CLIP1-203ENST00000361654 FAM240AA0A1B0GVK7 77 aa7.87□□□□□ -1.15
CLIP1-203ENST00000361654 NDUFC2-KCTD14E9PQ53 114 aa7.87□□□□□ -1.15
CLIP1-203ENST00000361654 LRRK2Q5S007 2527 aa7.87□□□□□ -1.15
CLIP1-203ENST00000361654 X6R8D5 127 aa7.87□□□□□ -1.15
CLIP1-203ENST00000361654 IGHV6-1A0A0B4J1U7 121 aa7.87□□□□□ -1.15
CLIP1-203ENST00000361654 Q8N2B8 174 aa7.87□□□□□ -1.15
CLIP1-203ENST00000361654 URB1-AS1Q96HZ7 61 aa7.87□□□□□ -1.15
CLIP1-203ENST00000361654 LYPD5Q6UWN5 251 aa7.86□□□□□ -1.15
CLIP1-203ENST00000361654 Q9BRP9 147 aa7.86□□□□□ -1.15
CLIP1-203ENST00000361654 MAPKAPK5-AS1Q8N8E1 139 aa7.86□□□□□ -1.15
CLIP1-203ENST00000361654 MPLKIPQ8TAP9 179 aa7.86□□□□□ -1.15
CLIP1-203ENST00000361654 TRBV10-3A0A0K0K1G6 114 aa7.86□□□□□ -1.15
CLIP1-203ENST00000361654 MDFIQ99750 246 aa7.85□□□□□ -1.15
CLIP1-203ENST00000361654 LINC00242Q5T6M2 205 aa7.85□□□□□ -1.15
CLIP1-203ENST00000361654 POM121L12Q8N7R1 296 aa7.85□□□□□ -1.15
CLIP1-203ENST00000361654 NTM-AS1Q6ZSK4 140 aa7.84□□□□□ -1.15
CLIP1-203ENST00000361654 A0A1B0GUV1 79 aa7.83□□□□□ -1.16
CLIP1-203ENST00000361654 ZNF462Q96JM2 2506 aa7.83□□□□□ -1.16
CLIP1-203ENST00000361654 XGP55808 180 aa7.83□□□□□ -1.16
CLIP1-203ENST00000361654 A6NED7 52 aa7.82□□□□□ -1.16
CLIP1-203ENST00000361654 CSDC2Q9Y534 153 aaKnown RBP7.82□□□□□ -1.16
CLIP1-203ENST00000361654 KIAA1549Q9HCM3 1950 aa7.82□□□□□ -1.16
CLIP1-203ENST00000361654 CNFNQ9BYD5 112 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms