RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 FHL3Q13643 280 aa9.98□□□□□ -0.81
CTR9-201ENST00000361367 LINC01620Q4KN68 170 aa9.98□□□□□ -0.81
CTR9-201ENST00000361367 BEAN1Q3B7T3 259 aa9.97□□□□□ -0.81
CTR9-201ENST00000361367 KRTAP24-1Q3LI83 254 aa9.97□□□□□ -0.81
CTR9-201ENST00000361367 ANKRD29Q8N6D5 301 aa9.97□□□□□ -0.81
CTR9-201ENST00000361367 A8MZ25 164 aa9.97□□□□□ -0.81
CTR9-201ENST00000361367 LINC00526Q96FQ7 95 aa9.97□□□□□ -0.81
CTR9-201ENST00000361367 FHL2Q14192 279 aa9.97□□□□□ -0.81
CTR9-201ENST00000361367 CDC42SE2Q9NRR3 84 aa9.97□□□□□ -0.81
CTR9-201ENST00000361367 USP24Q9UPU5 2620 aa9.97□□□□□ -0.81
CTR9-201ENST00000361367 MGAQ8IWI9 3026 aa9.96□□□□□ -0.81
CTR9-201ENST00000361367 UNC80Q8N2C7 3258 aa9.96□□□□□ -0.81
CTR9-201ENST00000361367 G3V4G9 280 aa9.96□□□□□ -0.81
CTR9-201ENST00000361367 MAPKAPK5-AS1Q8N8E1 139 aa9.96□□□□□ -0.81
CTR9-201ENST00000361367 LY6G6CO95867 125 aa9.96□□□□□ -0.82
CTR9-201ENST00000361367 RBMY1FQ15415 496 aaKnown RBP9.95□□□□□ -0.82
CTR9-201ENST00000361367 TP73-AS1Q9UF72 201 aa9.95□□□□□ -0.82
CTR9-201ENST00000361367 ITPR3Q14573 2671 aa9.95□□□□□ -0.82
CTR9-201ENST00000361367 FUSP35637 526 aaKnown RBP eCLIP9.95□□□□□ -0.82
CTR9-201ENST00000361367 TAX1BP3O14907 124 aa9.95□□□□□ -0.82
CTR9-201ENST00000361367 CLEC2BQ92478 149 aa9.95□□□□□ -0.82
CTR9-201ENST00000361367 IGIPA6NJ69 53 aa9.94□□□□□ -0.82
CTR9-201ENST00000361367 UBE2D1P51668 147 aa9.94□□□□□ -0.82
CTR9-201ENST00000361367 ATRQ13535 2644 aa9.94□□□□□ -0.82
CTR9-201ENST00000361367 LINC00308Q8TCZ7 52 aa9.94□□□□□ -0.82
CTR9-201ENST00000361367 COX7BP24311 80 aa9.94□□□□□ -0.82
CTR9-201ENST00000361367 NUPR2A6NF83 97 aa9.93□□□□□ -0.82
CTR9-201ENST00000361367 HIGD2AQ9BW72 106 aa9.92□□□□□ -0.82
CTR9-201ENST00000361367 A0A0B4J2C4 111 aa9.92□□□□□ -0.82
CTR9-201ENST00000361367 hADV29S1A0JD25 119 aa9.92□□□□□ -0.82
CTR9-201ENST00000361367 URB1-AS1Q96HZ7 61 aa9.92□□□□□ -0.82
CTR9-201ENST00000361367 WDFY4Q6ZS81 3184 aa9.91□□□□□ -0.82
CTR9-201ENST00000361367 LINC00310P59036 64 aa9.91□□□□□ -0.82
CTR9-201ENST00000361367 CHCHD7Q9BUK0 85 aa9.91□□□□□ -0.82
CTR9-201ENST00000361367 TRIOO75962 3097 aa9.91□□□□□ -0.82
CTR9-201ENST00000361367 A0A096LNT2 108 aa9.91□□□□□ -0.82
CTR9-201ENST00000361367 SPANXDQ9BXN6 97 aa9.91□□□□□ -0.82
CTR9-201ENST00000361367 Q6ZSN1 163 aa9.9□□□□□ -0.82
CTR9-201ENST00000361367 SPANXB1Q9NS25 103 aaPredicted RBP9.9□□□□□ -0.82
CTR9-201ENST00000361367 H3BQ85 93 aa9.9□□□□□ -0.82
CTR9-201ENST00000361367 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
CTR9-201ENST00000361367 A0A087WZ39 114 aa9.9□□□□□ -0.82
CTR9-201ENST00000361367 MAST4O15021 2626 aa9.9□□□□□ -0.83
CTR9-201ENST00000361367 FAM19A5Q7Z5A7 132 aaPredicted RBP9.9□□□□□ -0.83
CTR9-201ENST00000361367 LINC00694P0DN24 101 aa9.89□□□□□ -0.83
CTR9-201ENST00000361367 PTH2Q96A98 100 aa9.89□□□□□ -0.83
CTR9-201ENST00000361367 IGLV4-69A0A075B6H9 119 aa9.89□□□□□ -0.83
CTR9-201ENST00000361367 WFDC2Q14508 124 aa9.89□□□□□ -0.83
CTR9-201ENST00000361367 CITED1Q99966 193 aa9.89□□□□□ -0.83
CTR9-201ENST00000361367 IGLV4-60A0A075B6I1 120 aa9.88□□□□□ -0.83
CTR9-201ENST00000361367 TEN1Q86WV5 123 aa9.88□□□□□ -0.83
CTR9-201ENST00000361367 B9D2Q9BPU9 175 aa9.88□□□□□ -0.83
CTR9-201ENST00000361367 TRBV10-2A0A0K0K1G8 114 aa9.87□□□□□ -0.83
CTR9-201ENST00000361367 JMJD7-PLA2G4BH0Y9G9 81 aa9.87□□□□□ -0.83
CTR9-201ENST00000361367 C11orf72Q8NBR9 251 aa9.87□□□□□ -0.83
CTR9-201ENST00000361367 H3BT86 120 aa9.87□□□□□ -0.83
CTR9-201ENST00000361367 TRACP01848 142 aa9.87□□□□□ -0.83
CTR9-201ENST00000361367 TIMM17BO60830 172 aa9.86□□□□□ -0.83
CTR9-201ENST00000361367 TMEM256-PLSCR3K7ERE1 68 aa9.86□□□□□ -0.83
CTR9-201ENST00000361367 KLK9Q2XQG4 91 aa9.86□□□□□ -0.83
CTR9-201ENST00000361367 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
CTR9-201ENST00000361367 Q8IZM0 81 aa9.86□□□□□ -0.83
CTR9-201ENST00000361367 CYSRT1A8MQ03 144 aa9.85□□□□□ -0.83
CTR9-201ENST00000361367 RBM3P98179 157 aaKnown RBP9.85□□□□□ -0.83
CTR9-201ENST00000361367 C4orf48Q5BLP8 95 aa9.85□□□□□ -0.83
CTR9-201ENST00000361367 KIF25-AS1Q9Y6Z4 181 aa9.85□□□□□ -0.83
CTR9-201ENST00000361367 FAM19A4Q96LR4 140 aa9.84□□□□□ -0.83
CTR9-201ENST00000361367 CSDC2Q9Y534 153 aaKnown RBP9.84□□□□□ -0.83
CTR9-201ENST00000361367 ACYP1P07311 99 aa9.84□□□□□ -0.83
CTR9-201ENST00000361367 DSPP15924 2871 aaKnown RBP9.84□□□□□ -0.83
CTR9-201ENST00000361367 BPTFQ12830 3046 aa9.84□□□□□ -0.83
CTR9-201ENST00000361367 TCL1BO95988 128 aa9.83□□□□□ -0.84
CTR9-201ENST00000361367 C6orf99Q4VX62 202 aa9.83□□□□□ -0.84
CTR9-201ENST00000361367 NHLRC4P0CG21 123 aaPredicted RBP9.83□□□□□ -0.84
CTR9-201ENST00000361367 C9orf153Q5TBE3 101 aa9.83□□□□□ -0.84
CTR9-201ENST00000361367 CELA1Q9UNI1 258 aa9.83□□□□□ -0.84
CTR9-201ENST00000361367 POM121L12Q8N7R1 296 aa9.83□□□□□ -0.84
CTR9-201ENST00000361367 MUC4Q99102 2169 aa9.83□□□□□ -0.84
CTR9-201ENST00000361367 NREPQ16612 68 aa9.82□□□□□ -0.84
CTR9-201ENST00000361367 LYPD5Q6UWN5 251 aa9.82□□□□□ -0.84
CTR9-201ENST00000361367 XIRP2A4UGR9 3374 aa9.82□□□□□ -0.84
CTR9-201ENST00000361367 SMIM1B2RUZ4 78 aa9.82□□□□□ -0.84
CTR9-201ENST00000361367 UNQ6190/PRO20217Q6UXQ8 127 aa9.82□□□□□ -0.84
CTR9-201ENST00000361367 CDH23Q9H251 3354 aa9.82□□□□□ -0.84
CTR9-201ENST00000361367 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
CTR9-201ENST00000361367 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
CTR9-201ENST00000361367 WFDC10BQ8IUB3 73 aa9.82□□□□□ -0.84
CTR9-201ENST00000361367 A0A096LNJ9 63 aa9.81□□□□□ -0.84
CTR9-201ENST00000361367 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
CTR9-201ENST00000361367 LRCOL1A6NCL2 159 aa9.81□□□□□ -0.84
CTR9-201ENST00000361367 C2orf91Q6ZV80 131 aa9.8□□□□□ -0.84
CTR9-201ENST00000361367 AMELXQ99217 191 aa9.8□□□□□ -0.84
CTR9-201ENST00000361367 A0A1B0GUV1 79 aa9.8□□□□□ -0.84
CTR9-201ENST00000361367 COX6A2Q02221 97 aa9.8□□□□□ -0.84
CTR9-201ENST00000361367 COX17Q14061 63 aa9.8□□□□□ -0.84
CTR9-201ENST00000361367 A0A096LNI7 61 aa9.79□□□□□ -0.84
CTR9-201ENST00000361367 TRIAP1O43715 76 aa9.79□□□□□ -0.84
CTR9-201ENST00000361367 C7orf33Q8WU49 177 aa9.79□□□□□ -0.84
CTR9-201ENST00000361367 TRAV23DV6A0A075B6W5 121 aa9.79□□□□□ -0.84
CTR9-201ENST00000361367 M0R378 163 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms