RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 Q6ZQY7 126 aa12.96□□□□□ -0.33
CACNA1A-201ENST00000360228 C19orf71A6NCJ1 209 aa12.96□□□□□ -0.34
CACNA1A-201ENST00000360228 LINC00526Q96FQ7 95 aa12.96□□□□□ -0.34
CACNA1A-201ENST00000360228 PLAC8L1A1L4L8 177 aa12.96□□□□□ -0.34
CACNA1A-201ENST00000360228 TMEM254Q8TBM7 123 aa12.96□□□□□ -0.34
CACNA1A-201ENST00000360228 SPINK1P00995 79 aa12.95□□□□□ -0.34
CACNA1A-201ENST00000360228 TMEM89A2RUT3 159 aa12.95□□□□□ -0.34
CACNA1A-201ENST00000360228 LOC100131303A0A0U1RQF7 123 aa12.95□□□□□ -0.34
CACNA1A-201ENST00000360228 U3KQA8 63 aa12.94□□□□□ -0.34
CACNA1A-201ENST00000360228 LINC00208Q96KT6 92 aa12.94□□□□□ -0.34
CACNA1A-201ENST00000360228 COX17Q14061 63 aa12.94□□□□□ -0.34
CACNA1A-201ENST00000360228 SMIM11BQ8TCY0 68 aa12.94□□□□□ -0.34
CACNA1A-201ENST00000360228 LST1O00453 97 aa12.94□□□□□ -0.34
CACNA1A-201ENST00000360228 NCOR2Q9Y618 2525 aa12.94□□□□□ -0.34
CACNA1A-201ENST00000360228 PRORYQ9H606 182 aa12.93□□□□□ -0.34
CACNA1A-201ENST00000360228 OXLD1Q5BKU9 147 aa12.93□□□□□ -0.34
CACNA1A-201ENST00000360228 ZNF80P51504 273 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-201ENST00000360228 IGF2-ASQ6U949 168 aa12.93□□□□□ -0.34
CACNA1A-201ENST00000360228 M0R378 163 aa12.93□□□□□ -0.34
CACNA1A-201ENST00000360228 TRBV7-7A0A0K0K1E9 115 aa12.92□□□□□ -0.34
CACNA1A-201ENST00000360228 LINC00322Q6ZN03 302 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-201ENST00000360228 ODF3Q96PU9 254 aa12.92□□□□□ -0.34
CACNA1A-201ENST00000360228 XGP55808 180 aa12.91□□□□□ -0.34
CACNA1A-201ENST00000360228 ZNF22P17026 224 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-201ENST00000360228 SPINT4Q6UDR6 99 aa12.91□□□□□ -0.34
CACNA1A-201ENST00000360228 PIEZO2Q9H5I5 2752 aa12.91□□□□□ -0.34
CACNA1A-201ENST00000360228 PYGO1Q9Y3Y4 419 aa12.91□□□□□ -0.34
CACNA1A-201ENST00000360228 LY6G6CO95867 125 aa12.9□□□□□ -0.34
CACNA1A-201ENST00000360228 CRYGAP11844 174 aa12.9□□□□□ -0.34
CACNA1A-201ENST00000360228 LOC107984640A0A0U1RRK4 108 aa12.9□□□□□ -0.34
CACNA1A-201ENST00000360228 LINC00474Q9P2X8 69 aa12.9□□□□□ -0.34
CACNA1A-201ENST00000360228 IGHV6-1A0A0B4J1U7 121 aa12.89□□□□□ -0.35
CACNA1A-201ENST00000360228 JMJD1CQ15652 2540 aa12.89□□□□□ -0.35
CACNA1A-201ENST00000360228 MAPKAPK5-AS1Q8N8E1 139 aa12.89□□□□□ -0.35
CACNA1A-201ENST00000360228 Q8N7P7 452 aa12.88□□□□□ -0.35
CACNA1A-201ENST00000360228 IGLV2-14P01704 120 aa12.88□□□□□ -0.35
CACNA1A-201ENST00000360228 BEAN1Q3B7T3 259 aa12.88□□□□□ -0.35
CACNA1A-201ENST00000360228 CCDC140Q96MF4 163 aa12.88□□□□□ -0.35
CACNA1A-201ENST00000360228 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.87□□□□□ -0.35
CACNA1A-201ENST00000360228 PLA2G2EQ9NZK7 142 aa12.87□□□□□ -0.35
CACNA1A-201ENST00000360228 C8orf87E5RJ46 101 aa12.87□□□□□ -0.35
CACNA1A-201ENST00000360228 LINC01548A6NM66 108 aa12.87□□□□□ -0.35
CACNA1A-201ENST00000360228 IGLV4-69A0A075B6H9 119 aa12.87□□□□□ -0.35
CACNA1A-201ENST00000360228 PROK1P58294 105 aa12.86□□□□□ -0.35
CACNA1A-201ENST00000360228 LINC01547P58512 204 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-201ENST00000360228 CD164L2Q6UWJ8 174 aa12.86□□□□□ -0.35
CACNA1A-201ENST00000360228 GDF5OSQ5U4N7 250 aa12.86□□□□□ -0.35
CACNA1A-201ENST00000360228 NAV2Q8IVL1 2488 aa12.86□□□□□ -0.35
CACNA1A-201ENST00000360228 M0QY20 66 aa12.86□□□□□ -0.35
CACNA1A-201ENST00000360228 ZNF73O43830 326 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-201ENST00000360228 SPTBN4Q9H254 2564 aa12.86□□□□□ -0.35
CACNA1A-201ENST00000360228 TRBV10-3A0A0K0K1G6 114 aa12.86□□□□□ -0.35
CACNA1A-201ENST00000360228 DAZAP2Q15038 168 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-201ENST00000360228 EIF4EBP1Q13541 118 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-201ENST00000360228 KPRPQ5T749 579 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-201ENST00000360228 ADORA2A-AS1P86434 159 aa12.84□□□□□ -0.35
CACNA1A-201ENST00000360228 LINC00482Q8N8I6 264 aa12.84□□□□□ -0.35
CACNA1A-201ENST00000360228 hDV103S1A0JD37 113 aa12.84□□□□□ -0.35
CACNA1A-201ENST00000360228 PLA2G2CQ5R387 149 aa12.83□□□□□ -0.35
CACNA1A-201ENST00000360228 TRAV10A0A0B4J240 114 aa12.83□□□□□ -0.36
CACNA1A-201ENST00000360228 PCOTHQ58A44 107 aa12.83□□□□□ -0.36
CACNA1A-201ENST00000360228 H0Y9P7 68 aa12.83□□□□□ -0.36
CACNA1A-201ENST00000360228 BBC3Q96PG8 261 aaPredicted RBP12.83□□□□□ -0.36
CACNA1A-201ENST00000360228 DEFB114Q30KQ6 69 aa12.83□□□□□ -0.36
CACNA1A-201ENST00000360228 ZNF843Q8N446 348 aa12.82□□□□□ -0.36
CACNA1A-201ENST00000360228 KRTAP27-1Q3LI81 207 aa12.82□□□□□ -0.36
CACNA1A-201ENST00000360228 TRBV6-4A0A1B0GX49 114 aa12.8□□□□□ -0.36
CACNA1A-201ENST00000360228 IGLV1-47P01700 117 aa12.8□□□□□ -0.36
CACNA1A-201ENST00000360228 SBSPONQ8IVN8 264 aa12.79□□□□□ -0.36
CACNA1A-201ENST00000360228 RPL28P46779 137 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-201ENST00000360228 RPS28P62857 69 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-201ENST00000360228 REG3GQ6UW15 175 aa12.79□□□□□ -0.36
CACNA1A-201ENST00000360228 A0A1B0GU69 56 aa12.79□□□□□ -0.36
CACNA1A-201ENST00000360228 PIP4P1Q86T03 277 aa12.79□□□□□ -0.36
CACNA1A-201ENST00000360228 NTM-AS1Q6ZSK4 140 aa12.79□□□□□ -0.36
CACNA1A-201ENST00000360228 PCSK5Q92824 1860 aa12.78□□□□□ -0.36
CACNA1A-201ENST00000360228 Q8N6K4 173 aa12.78□□□□□ -0.36
CACNA1A-201ENST00000360228 Q8N3U1 123 aa12.78□□□□□ -0.36
CACNA1A-201ENST00000360228 RNASE3P12724 160 aaKnown RBP12.77□□□□□ -0.36
CACNA1A-201ENST00000360228 U3KQK5 164 aa12.77□□□□□ -0.36
CACNA1A-201ENST00000360228 PRLHP81277 87 aa12.77□□□□□ -0.36
CACNA1A-201ENST00000360228 C1orf137Q5JT78 98 aa12.77□□□□□ -0.36
CACNA1A-201ENST00000360228 CR1P17927 2039 aa12.77□□□□□ -0.37
CACNA1A-201ENST00000360228 COL27A1Q8IZC6 1860 aaPredicted RBP12.77□□□□□ -0.37
CACNA1A-201ENST00000360228 INAFM1C9JVW0 142 aa12.76□□□□□ -0.37
CACNA1A-201ENST00000360228 K7EQG2 157 aa12.76□□□□□ -0.37
CACNA1A-201ENST00000360228 LELP1Q5T871 98 aa12.75□□□□□ -0.37
CACNA1A-201ENST00000360228 Q6ZSR3 168 aa12.75□□□□□ -0.37
CACNA1A-201ENST00000360228 TSHBP01222 138 aa12.74□□□□□ -0.37
CACNA1A-201ENST00000360228 LINC00959A0A1B0GUT2 108 aa12.74□□□□□ -0.37
CACNA1A-201ENST00000360228 C7orf65Q6ZTY9 151 aa12.73□□□□□ -0.37
CACNA1A-201ENST00000360228 Q8N814 137 aa12.73□□□□□ -0.37
CACNA1A-201ENST00000360228 Q6YL49 198 aa12.73□□□□□ -0.37
CACNA1A-201ENST00000360228 IGLV2-8P01709 118 aa12.73□□□□□ -0.37
CACNA1A-201ENST00000360228 C2orf91Q6ZV80 131 aa12.73□□□□□ -0.37
CACNA1A-201ENST00000360228 MBD6Q96DN6 1003 aa12.72□□□□□ -0.37
CACNA1A-201ENST00000360228 NUPR2A6NF83 97 aa12.72□□□□□ -0.37
CACNA1A-201ENST00000360228 Q6ZS46 218 aa12.71□□□□□ -0.37
CACNA1A-201ENST00000360228 TNFRSF13BO14836 293 aaPredicted RBP12.71□□□□□ -0.37
CACNA1A-201ENST00000360228 DEFB116Q30KQ4 102 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms