RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ZNF22P17026 224 aaPredicted RBP9.06□□□□□ -0.96
GGPS1-202ENST00000358966 LINC01620Q4KN68 170 aa9.06□□□□□ -0.96
GGPS1-202ENST00000358966 C2orf66Q6UXQ4 117 aa9.06□□□□□ -0.96
GGPS1-202ENST00000358966 PRO0628Q9UI54 55 aa9.06□□□□□ -0.96
GGPS1-202ENST00000358966 CRYGAP11844 174 aa9.06□□□□□ -0.96
GGPS1-202ENST00000358966 SPANXCQ9NY87 97 aa9.06□□□□□ -0.96
GGPS1-202ENST00000358966 PRO1854Q9UHT4 67 aa9.06□□□□□ -0.96
GGPS1-202ENST00000358966 TENM3Q9P273 2699 aa9.06□□□□□ -0.96
GGPS1-202ENST00000358966 MALP21145 153 aa9.05□□□□□ -0.96
GGPS1-202ENST00000358966 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
GGPS1-202ENST00000358966 MGAM2Q2M2H8 2515 aa9.05□□□□□ -0.96
GGPS1-202ENST00000358966 PLAC8L1A1L4L8 177 aa9.05□□□□□ -0.96
GGPS1-202ENST00000358966 H7C2G1 150 aa9.05□□□□□ -0.96
GGPS1-202ENST00000358966 C9orf66Q5T8R8 295 aa9.05□□□□□ -0.96
GGPS1-202ENST00000358966 OPRPNQ99935 248 aaPredicted RBP9.05□□□□□ -0.96
GGPS1-202ENST00000358966 TP53TG1Q9Y2A0 90 aa9.05□□□□□ -0.96
GGPS1-202ENST00000358966 SCGB3A1Q96QR1 104 aa9.04□□□□□ -0.96
GGPS1-202ENST00000358966 DEFB4AO15263 64 aa9.04□□□□□ -0.96
GGPS1-202ENST00000358966 TRACP01848 142 aa9.04□□□□□ -0.96
GGPS1-202ENST00000358966 TMEM263Q8WUH6 116 aaKnown RBP9.04□□□□□ -0.96
GGPS1-202ENST00000358966 IMUPQ9GZP8 106 aa9.04□□□□□ -0.96
GGPS1-202ENST00000358966 ORMDL2Q53FV1 153 aa9.03□□□□□ -0.96
GGPS1-202ENST00000358966 IL17DQ8TAD2 202 aa9.03□□□□□ -0.96
GGPS1-202ENST00000358966 TOMM6Q96B49 74 aa9.03□□□□□ -0.96
GGPS1-202ENST00000358966 C2orf48Q96LS8 159 aa9.03□□□□□ -0.96
GGPS1-202ENST00000358966 PYGO1Q9Y3Y4 419 aa9.03□□□□□ -0.96
GGPS1-202ENST00000358966 TRBV27A0A0K0K1C4 114 aa9.03□□□□□ -0.96
GGPS1-202ENST00000358966 TRBV10-2A0A0K0K1G8 114 aa9.03□□□□□ -0.96
GGPS1-202ENST00000358966 FAM240AA0A1B0GVK7 77 aa9.03□□□□□ -0.96
GGPS1-202ENST00000358966 F8VRH5 84 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 VCYO14598 125 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 RS1O15537 224 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 TSHBP01222 138 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 HERVK_113P61574 105 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 ATXN8Q156A1 80 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 DEFB135Q30KP9 77 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 C2orf82Q6UX34 121 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 LINC00336Q6ZUF6 198 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 H7C1H1 209 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 NEXN-AS1Q8NBZ9 246 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 LINC00467Q9BRT7 94 aa9.02□□□□□ -0.97
GGPS1-202ENST00000358966 PPP1R17O96001 155 aa9.01□□□□□ -0.97
GGPS1-202ENST00000358966 TRBV6-5A0A0K0K1A5 114 aa9.01□□□□□ -0.97
GGPS1-202ENST00000358966 CMC4P56277 68 aaPredicted RBP9.01□□□□□ -0.97
GGPS1-202ENST00000358966 TMEM258P61165 79 aa9.01□□□□□ -0.97
GGPS1-202ENST00000358966 RNASE13Q5GAN3 156 aaKnown RBP9.01□□□□□ -0.97
GGPS1-202ENST00000358966 IGHV3-30P01768 117 aa9□□□□□ -0.97
GGPS1-202ENST00000358966 IGHV3-30-5P0DP03 117 aa9□□□□□ -0.97
GGPS1-202ENST00000358966 TRGV2A0A075B6R0 118 aa9□□□□□ -0.97
GGPS1-202ENST00000358966 LOC100131303A0A0U1RQF7 123 aa9□□□□□ -0.97
GGPS1-202ENST00000358966 LINC01600Q96MT4 127 aa9□□□□□ -0.97
GGPS1-202ENST00000358966 A0A0J9YY99 117 aa8.99□□□□□ -0.97
GGPS1-202ENST00000358966 IGHV3-33P01772 117 aa8.99□□□□□ -0.97
GGPS1-202ENST00000358966 DEFB130BP0DP73 79 aa8.99□□□□□ -0.97
GGPS1-202ENST00000358966 DEFB130AP0DP74 79 aa8.99□□□□□ -0.97
GGPS1-202ENST00000358966 TMEM170BQ5T4T1 132 aa8.99□□□□□ -0.97
GGPS1-202ENST00000358966 ATP5G1P05496 136 aa8.99□□□□□ -0.97
GGPS1-202ENST00000358966 I3L3M4 83 aa8.98□□□□□ -0.97
GGPS1-202ENST00000358966 Q1RN00 199 aa8.98□□□□□ -0.97
GGPS1-202ENST00000358966 V9GYY9 64 aa8.98□□□□□ -0.97
GGPS1-202ENST00000358966 EIF4EBP3O60516 100 aaPredicted RBP8.98□□□□□ -0.97
GGPS1-202ENST00000358966 SLC25A29Q8N8R3 303 aa8.98□□□□□ -0.97
GGPS1-202ENST00000358966 C16orf74Q96GX8 76 aa8.98□□□□□ -0.97
GGPS1-202ENST00000358966 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.97□□□□□ -0.97
GGPS1-202ENST00000358966 TRAV13-1A0A0B4J241 112 aa8.97□□□□□ -0.97
GGPS1-202ENST00000358966 IGKV2-29A2NJV5 120 aaPredicted RBP8.97□□□□□ -0.97
GGPS1-202ENST00000358966 IGIPA6NJ69 53 aa8.97□□□□□ -0.97
GGPS1-202ENST00000358966 SPANXDQ9BXN6 97 aa8.97□□□□□ -0.97
GGPS1-202ENST00000358966 H7C423 109 aa8.97□□□□□ -0.97
GGPS1-202ENST00000358966 KRTAP10-11P60412 298 aa8.97□□□□□ -0.97
GGPS1-202ENST00000358966 WFDC9Q8NEX5 89 aa8.97□□□□□ -0.97
GGPS1-202ENST00000358966 SMCR5Q8TEV8 140 aa8.97□□□□□ -0.97
GGPS1-202ENST00000358966 X6R8D5 127 aa8.97□□□□□ -0.97
GGPS1-202ENST00000358966 TRAV12-1A0A0B4J245 112 aa8.96□□□□□ -0.98
GGPS1-202ENST00000358966 PFN2P35080 140 aa8.96□□□□□ -0.98
GGPS1-202ENST00000358966 IGHV4-30-4P0DP06 118 aa8.96□□□□□ -0.98
GGPS1-202ENST00000358966 DAZ2Q13117 558 aaKnown RBP8.96□□□□□ -0.98
GGPS1-202ENST00000358966 C20orf203Q8NBC4 194 aa8.96□□□□□ -0.98
GGPS1-202ENST00000358966 FAM236DA0A1B0GTK5 79 aa8.95□□□□□ -0.98
GGPS1-202ENST00000358966 J3QQQ9 107 aa8.95□□□□□ -0.98
GGPS1-202ENST00000358966 FAM236CP0DP71 79 aa8.95□□□□□ -0.98
GGPS1-202ENST00000358966 PIK3CD-AS1Q5SR53 167 aa8.95□□□□□ -0.98
GGPS1-202ENST00000358966 DEFB121Q5J5C9 76 aa8.94□□□□□ -0.98
GGPS1-202ENST00000358966 K7EQD1 137 aa8.94□□□□□ -0.98
GGPS1-202ENST00000358966 PRB2P02812 416 aaPredicted RBP8.93□□□□□ -0.98
GGPS1-202ENST00000358966 LINC00643Q86TS7 51 aa8.93□□□□□ -0.98
GGPS1-202ENST00000358966 FAM104AQ969W3 186 aa8.93□□□□□ -0.98
GGPS1-202ENST00000358966 CHCHD7Q9BUK0 85 aa8.93□□□□□ -0.98
GGPS1-202ENST00000358966 IGLV4-69A0A075B6H9 119 aa8.93□□□□□ -0.98
GGPS1-202ENST00000358966 C11orf86A6NJI1 115 aa8.93□□□□□ -0.98
GGPS1-202ENST00000358966 TRIAP1O43715 76 aa8.93□□□□□ -0.98
GGPS1-202ENST00000358966 TRGV4A0A0C4DH28 118 aa8.92□□□□□ -0.98
GGPS1-202ENST00000358966 H3BT86 120 aa8.92□□□□□ -0.98
GGPS1-202ENST00000358966 RETNQ9HD89 108 aa8.92□□□□□ -0.98
GGPS1-202ENST00000358966 ATOX1O00244 68 aa8.92□□□□□ -0.98
GGPS1-202ENST00000358966 FAM222AQ5U5X8 452 aa8.92□□□□□ -0.98
GGPS1-202ENST00000358966 C5orf38Q86SI9 138 aa8.92□□□□□ -0.98
GGPS1-202ENST00000358966 IGLV4-3A0A075B6K6 122 aa8.91□□□□□ -0.98
GGPS1-202ENST00000358966 RHOHQ15669 191 aa8.91□□□□□ -0.98
GGPS1-202ENST00000358966 NTM-AS1Q6ZSK4 140 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms