RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 ZNF295-AS1Q8N0V1 137 aa8.22□□□□□ -1.09
COL11A1-202ENST00000358392 CRIP2P52943 208 aaPredicted RBP8.22□□□□□ -1.09
COL11A1-202ENST00000358392 WNK1Q9H4A3 2382 aa8.22□□□□□ -1.09
COL11A1-202ENST00000358392 PRYO14603 147 aa8.22□□□□□ -1.09
COL11A1-202ENST00000358392 P0C879 139 aa8.21□□□□□ -1.09
COL11A1-202ENST00000358392 LMO4P61968 165 aa8.21□□□□□ -1.09
COL11A1-202ENST00000358392 TRAV10A0A0B4J240 114 aa8.21□□□□□ -1.1
COL11A1-202ENST00000358392 CRYGAP11844 174 aa8.21□□□□□ -1.1
COL11A1-202ENST00000358392 RNASE3P12724 160 aaKnown RBP8.21□□□□□ -1.1
COL11A1-202ENST00000358392 LINC01547P58512 204 aaPredicted RBP8.21□□□□□ -1.1
COL11A1-202ENST00000358392 A0A087WYN8 130 aa8.21□□□□□ -1.1
COL11A1-202ENST00000358392 Q6JHZ5 121 aa8.2□□□□□ -1.1
COL11A1-202ENST00000358392 DSCAMO60469 2012 aa8.2□□□□□ -1.1
COL11A1-202ENST00000358392 ALPK3Q96L96 1907 aa8.2□□□□□ -1.1
COL11A1-202ENST00000358392 TRAV7A0A075B6U4 112 aa8.19□□□□□ -1.1
COL11A1-202ENST00000358392 Q8NA96 180 aa8.19□□□□□ -1.1
COL11A1-202ENST00000358392 IGLV2-11P01706 119 aa8.19□□□□□ -1.1
COL11A1-202ENST00000358392 EXPH5Q8NEV8 1989 aa8.19□□□□□ -1.1
COL11A1-202ENST00000358392 CYSRT1A8MQ03 144 aa8.18□□□□□ -1.1
COL11A1-202ENST00000358392 Q9UF83 564 aa8.18□□□□□ -1.1
COL11A1-202ENST00000358392 PYGO1Q9Y3Y4 419 aa8.18□□□□□ -1.1
COL11A1-202ENST00000358392 COX6A2Q02221 97 aa8.18□□□□□ -1.1
COL11A1-202ENST00000358392 LELP1Q5T871 98 aa8.18□□□□□ -1.1
COL11A1-202ENST00000358392 C11orf21Q9P2W6 132 aa8.18□□□□□ -1.1
COL11A1-202ENST00000358392 NTM-AS1Q6ZSK4 140 aa8.17□□□□□ -1.1
COL11A1-202ENST00000358392 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.17□□□□□ -1.1
COL11A1-202ENST00000358392 SBSPONQ8IVN8 264 aa8.17□□□□□ -1.1
COL11A1-202ENST00000358392 PLA2G2AP14555 144 aa8.17□□□□□ -1.1
COL11A1-202ENST00000358392 ATG2AQ2TAZ0 1938 aa8.17□□□□□ -1.1
COL11A1-202ENST00000358392 COX17Q14061 63 aa8.17□□□□□ -1.1
COL11A1-202ENST00000358392 C1orf137Q5JT78 98 aa8.17□□□□□ -1.1
COL11A1-202ENST00000358392 UNQ6190/PRO20217Q6UXQ8 127 aa8.16□□□□□ -1.1
COL11A1-202ENST00000358392 EDN2P20800 178 aa8.16□□□□□ -1.1
COL11A1-202ENST00000358392 Q8N814 137 aa8.16□□□□□ -1.1
COL11A1-202ENST00000358392 SORL1Q92673 2214 aa8.16□□□□□ -1.1
COL11A1-202ENST00000358392 REG3GQ6UW15 175 aa8.16□□□□□ -1.1
COL11A1-202ENST00000358392 TRBV7-7A0A0K0K1E9 115 aa8.15□□□□□ -1.1
COL11A1-202ENST00000358392 H0Y9P7 68 aa8.15□□□□□ -1.1
COL11A1-202ENST00000358392 TRBV10-3A0A0K0K1G6 114 aa8.15□□□□□ -1.11
COL11A1-202ENST00000358392 COL4A3Q01955 1670 aa8.15□□□□□ -1.11
COL11A1-202ENST00000358392 MRPS36P82909 103 aaKnown RBP8.15□□□□□ -1.11
COL11A1-202ENST00000358392 C6orf223Q8N319 242 aa8.15□□□□□ -1.11
COL11A1-202ENST00000358392 EIF4EBP1Q13541 118 aaPredicted RBP8.14□□□□□ -1.11
COL11A1-202ENST00000358392 YPEL4Q96NS1 127 aa8.14□□□□□ -1.11
COL11A1-202ENST00000358392 LY6G6DO95868 133 aa8.14□□□□□ -1.11
COL11A1-202ENST00000358392 PLA2G1BP04054 148 aaKnown RBP8.14□□□□□ -1.11
COL11A1-202ENST00000358392 MUC4Q99102 2169 aa8.14□□□□□ -1.11
COL11A1-202ENST00000358392 ZNF702PQ9H963 129 aa8.13□□□□□ -1.11
COL11A1-202ENST00000358392 CDC42SE2Q9NRR3 84 aa8.13□□□□□ -1.11
COL11A1-202ENST00000358392 LINC00575Q6W349 94 aa8.13□□□□□ -1.11
COL11A1-202ENST00000358392 RIF1Q5UIP0 2472 aaKnown RBP8.13□□□□□ -1.11
COL11A1-202ENST00000358392 RAI1Q7Z5J4 1906 aaPredicted RBP8.13□□□□□ -1.11
COL11A1-202ENST00000358392 CEP192Q8TEP8 1941 aa8.13□□□□□ -1.11
COL11A1-202ENST00000358392 PRRC2AP48634 2157 aaKnown RBP8.13□□□□□ -1.11
COL11A1-202ENST00000358392 Q8IZM0 81 aa8.13□□□□□ -1.11
COL11A1-202ENST00000358392 Q8N3U1 123 aa8.12□□□□□ -1.11
COL11A1-202ENST00000358392 LINC01556Q5JQF7 62 aa8.11□□□□□ -1.11
COL11A1-202ENST00000358392 A8MTW9 85 aa8.11□□□□□ -1.11
COL11A1-202ENST00000358392 Q9BRP9 147 aa8.11□□□□□ -1.11
COL11A1-202ENST00000358392 LINC00474Q9P2X8 69 aa8.11□□□□□ -1.11
COL11A1-202ENST00000358392 OXLD1Q5BKU9 147 aa8.1□□□□□ -1.11
COL11A1-202ENST00000358392 LINC00574Q9H8X3 128 aa8.1□□□□□ -1.11
COL11A1-202ENST00000358392 ZNF580Q9UK33 172 aa8.1□□□□□ -1.11
COL11A1-202ENST00000358392 PRLHP81277 87 aa8.1□□□□□ -1.11
COL11A1-202ENST00000358392 SHISA2Q6UWI4 295 aa8.1□□□□□ -1.11
COL11A1-202ENST00000358392 RPL28P46779 137 aaKnown RBP8.1□□□□□ -1.11
COL11A1-202ENST00000358392 TSPEAR-AS2P59090 65 aa8.1□□□□□ -1.11
COL11A1-202ENST00000358392 CRIP3Q6Q6R5 217 aa8.09□□□□□ -1.11
COL11A1-202ENST00000358392 POLR2KP53803 58 aaKnown RBP8.09□□□□□ -1.11
COL11A1-202ENST00000358392 IGLV5-52A0A0A0MRZ9 124 aa8.09□□□□□ -1.11
COL11A1-202ENST00000358392 FBXL19-AS1Q494R0 122 aa8.09□□□□□ -1.11
COL11A1-202ENST00000358392 TET2Q6N021 2002 aaPredicted RBP8.09□□□□□ -1.11
COL11A1-202ENST00000358392 NUPR2A6NF83 97 aa8.09□□□□□ -1.11
COL11A1-202ENST00000358392 HCG22E2RYF7 251 aa8.09□□□□□ -1.12
COL11A1-202ENST00000358392 ADAMTSL4-AS1Q5T5F5 129 aa8.08□□□□□ -1.12
COL11A1-202ENST00000358392 IGLV4-60A0A075B6I1 120 aa8.08□□□□□ -1.12
COL11A1-202ENST00000358392 BRI3O95415 125 aa8.08□□□□□ -1.12
COL11A1-202ENST00000358392 LINC00242Q5T6M2 205 aa8.08□□□□□ -1.12
COL11A1-202ENST00000358392 SERTAD4-AS1Q5TG53 156 aa8.08□□□□□ -1.12
COL11A1-202ENST00000358392 MRGPRG-AS1Q2M3A8 158 aa8.08□□□□□ -1.12
COL11A1-202ENST00000358392 A0A087WSZ3 146 aa8.08□□□□□ -1.12
COL11A1-202ENST00000358392 KLLNB2CW77 178 aa8.08□□□□□ -1.12
COL11A1-202ENST00000358392 PRORYQ9H606 182 aa8.07□□□□□ -1.12
COL11A1-202ENST00000358392 LINC01006Q8NI28 216 aa8.07□□□□□ -1.12
COL11A1-202ENST00000358392 IGIPA6NJ69 53 aa8.07□□□□□ -1.12
COL11A1-202ENST00000358392 CSDC2Q9Y534 153 aaKnown RBP8.07□□□□□ -1.12
COL11A1-202ENST00000358392 PSMG3-AS1Q96PY0 264 aa8.07□□□□□ -1.12
COL11A1-202ENST00000358392 AGRNO00468 2067 aa8.07□□□□□ -1.12
COL11A1-202ENST00000358392 C7orf65Q6ZTY9 151 aa8.07□□□□□ -1.12
COL11A1-202ENST00000358392 SMIM1B2RUZ4 78 aa8.06□□□□□ -1.12
COL11A1-202ENST00000358392 IGKV2D-30A0A075B6S6 120 aa8.06□□□□□ -1.12
COL11A1-202ENST00000358392 IGKV2-30P06310 120 aa8.06□□□□□ -1.12
COL11A1-202ENST00000358392 SMR3AQ99954 134 aa8.05□□□□□ -1.12
COL11A1-202ENST00000358392 GPR179Q6PRD1 2367 aa8.05□□□□□ -1.12
COL11A1-202ENST00000358392 CREBBPQ92793 2442 aa8.05□□□□□ -1.12
COL11A1-202ENST00000358392 CHCHD7Q9BUK0 85 aa8.04□□□□□ -1.12
COL11A1-202ENST00000358392 FSTL3O95633 263 aa8.04□□□□□ -1.12
COL11A1-202ENST00000358392 C11orf71Q6IPW1 123 aa8.03□□□□□ -1.12
COL11A1-202ENST00000358392 TMEM254Q8TBM7 123 aa8.02□□□□□ -1.13
COL11A1-202ENST00000358392 SPAG11AQ6PDA7 123 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms