RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 COX6A2Q02221 97 aa16.09■□□□□ 0.17
HMGA2-201ENST00000354636 DNAH17Q9UFH2 4485 aa16.08■□□□□ 0.17
HMGA2-201ENST00000354636 IGHV3OR16-9A0A0B4J2B5 98 aa16.08■□□□□ 0.16
HMGA2-201ENST00000354636 H0Y8G0 127 aa16.08■□□□□ 0.16
HMGA2-201ENST00000354636 SEC11AP67812 179 aa16.08■□□□□ 0.16
HMGA2-201ENST00000354636 TINCRA0A1B0GVN0 87 aa16.07■□□□□ 0.16
HMGA2-201ENST00000354636 CHTOPQ9Y3Y2 248 aaKnown RBP16.07■□□□□ 0.16
HMGA2-201ENST00000354636 IGLV4-69A0A075B6H9 119 aa16.06■□□□□ 0.16
HMGA2-201ENST00000354636 SYS1-DBNDD2H3BUS1 97 aa16.06■□□□□ 0.16
HMGA2-201ENST00000354636 C3orf79P0CE67 100 aa16.06■□□□□ 0.16
HMGA2-201ENST00000354636 ODF1Q14990 250 aa16.06■□□□□ 0.16
HMGA2-201ENST00000354636 SPATA12Q7Z6I5 190 aa16.06■□□□□ 0.16
HMGA2-201ENST00000354636 IGLC3P0DOY3 106 aa16.05■□□□□ 0.16
HMGA2-201ENST00000354636 HERVK_113P63121 156 aa16.05■□□□□ 0.16
HMGA2-201ENST00000354636 F8VRH5 84 aa16.04■□□□□ 0.16
HMGA2-201ENST00000354636 GEMIN7Q9H840 131 aaKnown RBP16.04■□□□□ 0.16
HMGA2-201ENST00000354636 MRPL35Q9NZE8 188 aaKnown RBP16.04■□□□□ 0.16
HMGA2-201ENST00000354636 KRTDAPP60985 99 aa16.03■□□□□ 0.16
HMGA2-201ENST00000354636 C5orf38Q86SI9 138 aa16.03■□□□□ 0.16
HMGA2-201ENST00000354636 COX7A2LO14548 114 aa16.02■□□□□ 0.15
HMGA2-201ENST00000354636 PET117Q6UWS5 81 aa16.02■□□□□ 0.15
HMGA2-201ENST00000354636 CHAC1Q9BUX1 264 aa16.02■□□□□ 0.15
HMGA2-201ENST00000354636 IGLV5-45A0A087WSX0 123 aa16.01■□□□□ 0.15
HMGA2-201ENST00000354636 LRCOL1A6NCL2 159 aa16.01■□□□□ 0.15
HMGA2-201ENST00000354636 LECT2O14960 151 aa16.01■□□□□ 0.15
HMGA2-201ENST00000354636 CDKN2A-AS1Q9UH64 79 aa16.01■□□□□ 0.15
HMGA2-201ENST00000354636 A0A087WZ39 114 aa16■□□□□ 0.15
HMGA2-201ENST00000354636 C11orf86A6NJI1 115 aa16■□□□□ 0.15
HMGA2-201ENST00000354636 TNP2Q05952 138 aa16■□□□□ 0.15
HMGA2-201ENST00000354636 FAT2Q9NYQ8 4349 aa15.99■□□□□ 0.15
HMGA2-201ENST00000354636 WFDC2Q14508 124 aa15.99■□□□□ 0.15
HMGA2-201ENST00000354636 LINC01545Q5VT33 79 aa15.99■□□□□ 0.15
HMGA2-201ENST00000354636 LINC00336Q6ZUF6 198 aa15.99■□□□□ 0.15
HMGA2-201ENST00000354636 LINC00469Q8N7U9 141 aa15.99■□□□□ 0.15
HMGA2-201ENST00000354636 PMCHL2Q9BQD1 86 aa15.99■□□□□ 0.15
HMGA2-201ENST00000354636 MALP21145 153 aa15.98■□□□□ 0.15
HMGA2-201ENST00000354636 A0A087WTM6 91 aa15.97■□□□□ 0.15
HMGA2-201ENST00000354636 USP17L23D6RBM5 183 aa15.97■□□□□ 0.15
HMGA2-201ENST00000354636 ZNF22P17026 224 aaPredicted RBP15.97■□□□□ 0.15
HMGA2-201ENST00000354636 LINC01561Q8N1V8 128 aa15.97■□□□□ 0.15
HMGA2-201ENST00000354636 C15orf56Q8N910 161 aa15.96■□□□□ 0.15
HMGA2-201ENST00000354636 DPM2O94777 84 aa15.95■□□□□ 0.14
HMGA2-201ENST00000354636 PLNP26678 52 aa15.95■□□□□ 0.14
HMGA2-201ENST00000354636 OR10D4PQ8NGN7 298 aa15.95■□□□□ 0.14
HMGA2-201ENST00000354636 IGHV1-58A0A0C4DH39 117 aa15.94■□□□□ 0.14
HMGA2-201ENST00000354636 EREGO14944 169 aa15.94■□□□□ 0.14
HMGA2-201ENST00000354636 CFAP161Q6P656 301 aa15.94■□□□□ 0.14
HMGA2-201ENST00000354636 TMEM170BQ5T4T1 132 aa15.94■□□□□ 0.14
HMGA2-201ENST00000354636 APOMO95445 188 aa15.93■□□□□ 0.14
HMGA2-201ENST00000354636 IGKCP01834 107 aa15.93■□□□□ 0.14
HMGA2-201ENST00000354636 IGHV3-64A0A075B6Q5 118 aa15.92■□□□□ 0.14
HMGA2-201ENST00000354636 H3BRM9 83 aa15.92■□□□□ 0.14
HMGA2-201ENST00000354636 C20orf202A1L168 122 aa15.9■□□□□ 0.14
HMGA2-201ENST00000354636 SMIM1B2RUZ4 78 aa15.9■□□□□ 0.14
HMGA2-201ENST00000354636 C14orf177Q52M58 125 aa15.9■□□□□ 0.14
HMGA2-201ENST00000354636 GVQW2A0A096LPI5 108 aaPredicted RBP15.89■□□□□ 0.13
HMGA2-201ENST00000354636 SPINK8P0C7L1 97 aa15.89■□□□□ 0.13
HMGA2-201ENST00000354636 Q8N814 137 aa15.89■□□□□ 0.13
HMGA2-201ENST00000354636 HIGD2BQ4VC39 106 aa15.89■□□□□ 0.13
HMGA2-201ENST00000354636 ORAOV1Q8WV07 137 aa15.89■□□□□ 0.13
HMGA2-201ENST00000354636 hDV102S1A0JD36 115 aa15.88■□□□□ 0.13
HMGA2-201ENST00000354636 TMEM223A0PJW6 202 aa15.88■□□□□ 0.13
HMGA2-201ENST00000354636 DNAH11Q96DT5 4516 aa15.87■□□□□ 0.13
HMGA2-201ENST00000354636 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.85■□□□□ 0.13
HMGA2-201ENST00000354636 IGLV5-39A0A0G2JS06 123 aa15.85■□□□□ 0.13
HMGA2-201ENST00000354636 KIAA0087Q14695 138 aa15.85■□□□□ 0.13
HMGA2-201ENST00000354636 PKD1P98161 4303 aa15.85■□□□□ 0.13
HMGA2-201ENST00000354636 ZNF561-AS1K7EIQ3 104 aa15.84■□□□□ 0.13
HMGA2-201ENST00000354636 SPAG11BQ08648 103 aa15.84■□□□□ 0.13
HMGA2-201ENST00000354636 LINC00526Q96FQ7 95 aa15.84■□□□□ 0.13
HMGA2-201ENST00000354636 AKR1D1P51857 326 aa15.84■□□□□ 0.13
HMGA2-201ENST00000354636 Q8IZM0 81 aa15.83■□□□□ 0.12
HMGA2-201ENST00000354636 TOMM7Q9P0U1 55 aa15.82■□□□□ 0.12
HMGA2-201ENST00000354636 SCGB1D1O95968 90 aa15.81■□□□□ 0.12
HMGA2-201ENST00000354636 SLPIP03973 132 aa15.81■□□□□ 0.12
HMGA2-201ENST00000354636 ATOH7Q8N100 152 aa15.81■□□□□ 0.12
HMGA2-201ENST00000354636 NTN5Q8WTR8 489 aaPredicted RBP15.81■□□□□ 0.12
HMGA2-201ENST00000354636 A0A1B0GVY2 172 aa15.79■□□□□ 0.12
HMGA2-201ENST00000354636 PRSS2P07478 247 aa15.79■□□□□ 0.12
HMGA2-201ENST00000354636 FUSP35637 526 aaKnown RBP eCLIP15.79■□□□□ 0.125e-7■■■■□ 23.7
HMGA2-201ENST00000354636 COX7B2Q8TF08 81 aa15.79■□□□□ 0.12
HMGA2-201ENST00000354636 C2orf48Q96LS8 159 aa15.79■□□□□ 0.12
HMGA2-201ENST00000354636 HERVK_113P61574 105 aa15.78■□□□□ 0.12
HMGA2-201ENST00000354636 JOSD1Q15040 202 aaPredicted RBP15.78■□□□□ 0.12
HMGA2-201ENST00000354636 C6orf226Q5I0X4 101 aa15.78■□□□□ 0.12
HMGA2-201ENST00000354636 STPG4Q8N801 248 aa15.78■□□□□ 0.12
HMGA2-201ENST00000354636 CNBPP62633 177 aaKnown RBP15.78■□□□□ 0.12
HMGA2-201ENST00000354636 KRTAP10-2P60368 255 aa15.77■□□□□ 0.11
HMGA2-201ENST00000354636 HECTD4Q9Y4D8 3996 aa15.77■□□□□ 0.11
HMGA2-201ENST00000354636 F8WDY8 70 aa15.76■□□□□ 0.11
HMGA2-201ENST00000354636 IGLV5-52A0A0A0MRZ9 124 aa15.75■□□□□ 0.11
HMGA2-201ENST00000354636 E9PLD3 99 aa15.75■□□□□ 0.11
HMGA2-201ENST00000354636 CAMK2N2Q96S95 79 aa15.75■□□□□ 0.11
HMGA2-201ENST00000354636 PGPEP1Q9NXJ5 209 aa15.75■□□□□ 0.11
HMGA2-201ENST00000354636 LEPROTO15243 131 aa15.74■□□□□ 0.11
HMGA2-201ENST00000354636 SYCNQ0VAF6 134 aa15.74■□□□□ 0.11
HMGA2-201ENST00000354636 C2orf82Q6UX34 121 aa15.74■□□□□ 0.11
HMGA2-201ENST00000354636 CKS1BP61024 79 aa15.73■□□□□ 0.11
HMGA2-201ENST00000354636 Q6ZRU5 148 aa15.73■□□□□ 0.11
HMGA2-201ENST00000354636 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms