RNA–Protein interactions for RNA: ENST00000348795.8

SNCG-201, Transcript of synuclein gamma, humanhuman

TSL 2 BASIC

Gene SNCG, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-201ENST00000348795 LINC00588Q9Y4M8 146 aa12.53□□□□□ -0.4
SNCG-201ENST00000348795 STAB2Q8WWQ8 2551 aa12.53□□□□□ -0.4
SNCG-201ENST00000348795 IGKV3OR2-268A0A0C4DH90 116 aa12.52□□□□□ -0.41
SNCG-201ENST00000348795 LGALS3P17931 250 aaKnown RBP12.52□□□□□ -0.41
SNCG-201ENST00000348795 A0A087WZ39 114 aa12.51□□□□□ -0.41
SNCG-201ENST00000348795 IGHV3OR16-9A0A0B4J2B5 98 aa12.51□□□□□ -0.41
SNCG-201ENST00000348795 PCP4L1A6NKN8 68 aa12.51□□□□□ -0.41
SNCG-201ENST00000348795 J3QQQ9 107 aa12.51□□□□□ -0.41
SNCG-201ENST00000348795 IGHV3-30P01768 117 aa12.51□□□□□ -0.41
SNCG-201ENST00000348795 IGHV3-33P01772 117 aa12.51□□□□□ -0.41
SNCG-201ENST00000348795 IGHV3-30-3P0DP02 117 aa12.51□□□□□ -0.41
SNCG-201ENST00000348795 IGHV3-30-5P0DP03 117 aa12.51□□□□□ -0.41
SNCG-201ENST00000348795 HNRNPA3P51991 378 aaKnown RBP12.51□□□□□ -0.41
SNCG-201ENST00000348795 SFTA2Q6UW10 78 aa12.51□□□□□ -0.41
SNCG-201ENST00000348795 COX6A2Q02221 97 aa12.5□□□□□ -0.41
SNCG-201ENST00000348795 UBE2DNLQ8IWF7 75 aa12.5□□□□□ -0.41
SNCG-201ENST00000348795 IGKV2D-26A0A0A0MRZ7 120 aa12.49□□□□□ -0.41
SNCG-201ENST00000348795 TRAV8-3A0A0A6YYJ7 113 aa12.49□□□□□ -0.41
SNCG-201ENST00000348795 IGLV5-39A0A0G2JS06 123 aa12.49□□□□□ -0.41
SNCG-201ENST00000348795 MYMXA0A1B0GTQ4 84 aa12.49□□□□□ -0.41
SNCG-201ENST00000348795 APOMO95445 188 aa12.48□□□□□ -0.41
SNCG-201ENST00000348795 CHCHD10Q8WYQ3 142 aaPredicted RBP12.48□□□□□ -0.41
SNCG-201ENST00000348795 UBE2WQ96B02 151 aa12.48□□□□□ -0.41
SNCG-201ENST00000348795 RMI2Q96E14 147 aa12.48□□□□□ -0.41
SNCG-201ENST00000348795 HIGD1BQ9P298 99 aa12.48□□□□□ -0.41
SNCG-201ENST00000348795 COX7A2LO14548 114 aa12.47□□□□□ -0.41
SNCG-201ENST00000348795 XCL1P47992 114 aa12.47□□□□□ -0.41
SNCG-201ENST00000348795 WWC2-AS2Q96NR7 200 aa12.47□□□□□ -0.41
SNCG-201ENST00000348795 ZNF815PA8K554 130 aa12.46□□□□□ -0.41
SNCG-201ENST00000348795 SMIM1B2RUZ4 78 aa12.46□□□□□ -0.41
SNCG-201ENST00000348795 SPINK8P0C7L1 97 aa12.46□□□□□ -0.41
SNCG-201ENST00000348795 ENHOQ6UWT2 76 aa12.46□□□□□ -0.41
SNCG-201ENST00000348795 PCP2Q8IVA1 136 aa12.46□□□□□ -0.41
SNCG-201ENST00000348795 MUC7Q8TAX7 377 aa12.46□□□□□ -0.41
SNCG-201ENST00000348795 Q9H8V8 135 aa12.46□□□□□ -0.41
SNCG-201ENST00000348795 IBA57-AS1B1ANH7 110 aa12.45□□□□□ -0.42
SNCG-201ENST00000348795 ZFAND6Q6FIF0 208 aa12.45□□□□□ -0.42
SNCG-201ENST00000348795 CLPSL2Q6UWE3 100 aa12.45□□□□□ -0.42
SNCG-201ENST00000348795 COX11Q9Y6N1 276 aa12.45□□□□□ -0.42
SNCG-201ENST00000348795 MALP21145 153 aa12.44□□□□□ -0.42
SNCG-201ENST00000348795 C1orf43Q9BWL3 253 aa12.44□□□□□ -0.42
SNCG-201ENST00000348795 HERV-K104P63124 156 aa12.43□□□□□ -0.42
SNCG-201ENST00000348795 SCGB1D4Q6XE38 83 aa12.43□□□□□ -0.42
SNCG-201ENST00000348795 Q8N3U1 123 aa12.43□□□□□ -0.42
SNCG-201ENST00000348795 LINC00587B1AMM8 73 aa12.42□□□□□ -0.42
SNCG-201ENST00000348795 TTC32Q5I0X7 151 aa12.42□□□□□ -0.42
SNCG-201ENST00000348795 NDUFA12Q9UI09 145 aa12.42□□□□□ -0.42
SNCG-201ENST00000348795 IGHV3-64A0A075B6Q5 118 aa12.41□□□□□ -0.42
SNCG-201ENST00000348795 GAGE12HA6NDE8 117 aa12.41□□□□□ -0.42
SNCG-201ENST00000348795 NDUFA1O15239 70 aa12.41□□□□□ -0.42
SNCG-201ENST00000348795 PRSS2P07478 247 aa12.41□□□□□ -0.42
SNCG-201ENST00000348795 CXCL5P42830 114 aa12.41□□□□□ -0.42
SNCG-201ENST00000348795 FOXI1Q12951 378 aa12.41□□□□□ -0.42
SNCG-201ENST00000348795 TAL2Q16559 108 aa12.41□□□□□ -0.42
SNCG-201ENST00000348795 C5orf38Q86SI9 138 aa12.41□□□□□ -0.42
SNCG-201ENST00000348795 COX7B2Q8TF08 81 aa12.41□□□□□ -0.42
SNCG-201ENST00000348795 IGLV10-54A0A075B6I4 117 aa12.4□□□□□ -0.42
SNCG-201ENST00000348795 GCSHP23434 173 aa12.4□□□□□ -0.42
SNCG-201ENST00000348795 CIRBPQ14011 172 aaKnown RBP12.4□□□□□ -0.42
SNCG-201ENST00000348795 Q8IZM0 81 aa12.4□□□□□ -0.42
SNCG-201ENST00000348795 MAPKAPK5-AS1Q8N8E1 139 aa12.4□□□□□ -0.42
SNCG-201ENST00000348795 M0R143 59 aa12.39□□□□□ -0.43
SNCG-201ENST00000348795 CFAP161Q6P656 301 aa12.39□□□□□ -0.43
SNCG-201ENST00000348795 PRKDCP78527 4128 aaKnown RBP12.38□□□□□ -0.43
SNCG-201ENST00000348795 TMEM238C9JI98 176 aa12.38□□□□□ -0.43
SNCG-201ENST00000348795 TSPEAR-AS2P59090 65 aa12.38□□□□□ -0.43
SNCG-201ENST00000348795 HSD52Q0P140 79 aa12.38□□□□□ -0.43
SNCG-201ENST00000348795 C6orf226Q5I0X4 101 aa12.38□□□□□ -0.43
SNCG-201ENST00000348795 TM2D2Q9BX73 214 aa12.38□□□□□ -0.43
SNCG-201ENST00000348795 F8WDY8 70 aa12.37□□□□□ -0.43
SNCG-201ENST00000348795 C3orf84H3BNL1 204 aa12.37□□□□□ -0.43
SNCG-201ENST00000348795 TIMM17BO60830 172 aa12.37□□□□□ -0.43
SNCG-201ENST00000348795 CTAG1AP78358 180 aa12.37□□□□□ -0.43
SNCG-201ENST00000348795 C2orf91Q6ZV80 131 aa12.37□□□□□ -0.43
SNCG-201ENST00000348795 Q6ZVH6 145 aa12.37□□□□□ -0.43
SNCG-201ENST00000348795 IGKV2D-24A0A075B6R9 120 aa12.36□□□□□ -0.43
SNCG-201ENST00000348795 COPS9Q8WXC6 57 aa12.36□□□□□ -0.43
SNCG-201ENST00000348795 TTTY13Q9BZ97 58 aa12.36□□□□□ -0.43
SNCG-201ENST00000348795 SPANXB1Q9NS25 103 aaPredicted RBP12.36□□□□□ -0.43
SNCG-201ENST00000348795 ORAOV1Q8WV07 137 aa12.35□□□□□ -0.43
SNCG-201ENST00000348795 TOMM7Q9P0U1 55 aa12.35□□□□□ -0.43
SNCG-201ENST00000348795 A0A0J9YXY3 114 aa12.33□□□□□ -0.44
SNCG-201ENST00000348795 CKS1BP61024 79 aa12.33□□□□□ -0.44
SNCG-201ENST00000348795 SRSF9Q13242 221 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNCG-201ENST00000348795 LBHQ53QV2 105 aaPredicted RBP12.33□□□□□ -0.44
SNCG-201ENST00000348795 ZNF625Q96I27 306 aaPredicted RBP12.33□□□□□ -0.44
SNCG-201ENST00000348795 HIST1H4GQ99525 98 aa12.33□□□□□ -0.44
SNCG-201ENST00000348795 KRTAP26-1Q6PEX3 210 aa12.32□□□□□ -0.44
SNCG-201ENST00000348795 TP73-AS1Q9UF72 201 aa12.31□□□□□ -0.44
SNCG-201ENST00000348795 Q9HAA7 133 aa12.3□□□□□ -0.44
SNCG-201ENST00000348795 DYNC2H1Q8NCM8 4307 aaKnown RBP12.3□□□□□ -0.44
SNCG-201ENST00000348795 NBDYA0A0U1RRE5 68 aa12.29□□□□□ -0.44
SNCG-201ENST00000348795 TMEM238LA0A1B0GVL6 79 aa12.29□□□□□ -0.44
SNCG-201ENST00000348795 A6NJY4 79 aa12.29□□□□□ -0.44
SNCG-201ENST00000348795 ZNF561-AS1K7EIQ3 104 aa12.29□□□□□ -0.44
SNCG-201ENST00000348795 IFITM1P13164 125 aa12.29□□□□□ -0.44
SNCG-201ENST00000348795 SPAG11BQ08648 103 aa12.29□□□□□ -0.44
SNCG-201ENST00000348795 SPANXDQ9BXN6 97 aa12.29□□□□□ -0.44
SNCG-201ENST00000348795 SPANXCQ9NY87 97 aa12.29□□□□□ -0.44
SNCG-201ENST00000348795 COX17Q14061 63 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms