RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 MT1HL1P0DM35 61 aa8.31□□□□□ -1.08
CLCC1-202ENST00000348264 SPAG11BQ08648 103 aa8.31□□□□□ -1.08
CLCC1-202ENST00000348264 ANAPC16Q96DE5 110 aa8.31□□□□□ -1.08
CLCC1-202ENST00000348264 C2orf48Q96LS8 159 aa8.31□□□□□ -1.08
CLCC1-202ENST00000348264 IGHV3OR16-9A0A0B4J2B5 98 aa8.3□□□□□ -1.08
CLCC1-202ENST00000348264 LOC107984640A0A0U1RRK4 108 aa8.3□□□□□ -1.08
CLCC1-202ENST00000348264 APOMO95445 188 aa8.3□□□□□ -1.08
CLCC1-202ENST00000348264 RAB5AP20339 215 aa8.3□□□□□ -1.08
CLCC1-202ENST00000348264 GAGE2BQ13066 116 aa8.3□□□□□ -1.08
CLCC1-202ENST00000348264 CLLU1Q5K131 121 aa8.3□□□□□ -1.08
CLCC1-202ENST00000348264 LOC389332A0A1B0GUA5 103 aa8.29□□□□□ -1.08
CLCC1-202ENST00000348264 PRSS47A8MTI9 375 aa8.29□□□□□ -1.08
CLCC1-202ENST00000348264 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.29□□□□□ -1.08
CLCC1-202ENST00000348264 ADCYAP1P18509 176 aa8.29□□□□□ -1.08
CLCC1-202ENST00000348264 IFI27P40305 119 aaPredicted RBP8.29□□□□□ -1.08
CLCC1-202ENST00000348264 OR10D4PQ8NGN7 298 aa8.29□□□□□ -1.08
CLCC1-202ENST00000348264 ORAOV1Q8WV07 137 aa8.29□□□□□ -1.08
CLCC1-202ENST00000348264 LAMTOR2Q9Y2Q5 125 aa8.29□□□□□ -1.08
CLCC1-202ENST00000348264 IGLV4-3A0A075B6K6 122 aa8.28□□□□□ -1.08
CLCC1-202ENST00000348264 A0A0J9YXV3 536 aa8.28□□□□□ -1.08
CLCC1-202ENST00000348264 SERTAD4-AS1Q5TG53 156 aa8.28□□□□□ -1.08
CLCC1-202ENST00000348264 MAP1LC3AQ9H492 121 aa8.28□□□□□ -1.08
CLCC1-202ENST00000348264 PYGO1Q9Y3Y4 419 aa8.28□□□□□ -1.08
CLCC1-202ENST00000348264 RPL18AQ02543 176 aaKnown RBP8.27□□□□□ -1.09
CLCC1-202ENST00000348264 A0A1W2PNN7 141 aa8.26□□□□□ -1.09
CLCC1-202ENST00000348264 IFITM2Q01629 132 aa8.26□□□□□ -1.09
CLCC1-202ENST00000348264 LINC00242Q5T6M2 205 aa8.26□□□□□ -1.09
CLCC1-202ENST00000348264 Q8N8P6 123 aa8.26□□□□□ -1.09
CLCC1-202ENST00000348264 TMEM141Q96I45 108 aa8.26□□□□□ -1.09
CLCC1-202ENST00000348264 TGIF2-C20orf24A0A0A6YYL0 155 aa8.25□□□□□ -1.09
CLCC1-202ENST00000348264 RNF151Q2KHN1 245 aa8.25□□□□□ -1.09
CLCC1-202ENST00000348264 C10orf25Q5T742 122 aa8.25□□□□□ -1.09
CLCC1-202ENST00000348264 ZC2HC1BQ5TFG8 222 aa8.25□□□□□ -1.09
CLCC1-202ENST00000348264 C2orf66Q6UXQ4 117 aa8.25□□□□□ -1.09
CLCC1-202ENST00000348264 LINC00173Q6ZV60 143 aa8.25□□□□□ -1.09
CLCC1-202ENST00000348264 MRPL35Q9NZE8 188 aaKnown RBP8.25□□□□□ -1.09
CLCC1-202ENST00000348264 A0A087WZ39 114 aa8.24□□□□□ -1.09
CLCC1-202ENST00000348264 NDUFA1O15239 70 aa8.24□□□□□ -1.09
CLCC1-202ENST00000348264 C9orf116Q5BN46 136 aaPredicted RBP8.24□□□□□ -1.09
CLCC1-202ENST00000348264 TEX43Q6ZNM6 134 aa8.24□□□□□ -1.09
CLCC1-202ENST00000348264 CYSLTR1Q9Y271 337 aa8.24□□□□□ -1.09
CLCC1-202ENST00000348264 TMEM218A2RU14 115 aa8.23□□□□□ -1.09
CLCC1-202ENST00000348264 F8WDY8 70 aa8.23□□□□□ -1.09
CLCC1-202ENST00000348264 UBE2D1P51668 147 aa8.23□□□□□ -1.09
CLCC1-202ENST00000348264 KIAA0087Q14695 138 aa8.23□□□□□ -1.09
CLCC1-202ENST00000348264 UQCC3Q6UW78 93 aa8.23□□□□□ -1.09
CLCC1-202ENST00000348264 UNQ6190/PRO20217Q6UXQ8 127 aa8.23□□□□□ -1.09
CLCC1-202ENST00000348264 Q6ZRP5 223 aa8.23□□□□□ -1.09
CLCC1-202ENST00000348264 IMMP2LQ96T52 175 aa8.23□□□□□ -1.09
CLCC1-202ENST00000348264 CTDSP1Q9GZU7 261 aa8.23□□□□□ -1.09
CLCC1-202ENST00000348264 C6orf48Q9UBA6 75 aa8.23□□□□□ -1.09
CLCC1-202ENST00000348264 PLA2G2DQ9UNK4 145 aa8.23□□□□□ -1.09
CLCC1-202ENST00000348264 KIAA1644Q3SXP7 199 aa8.22□□□□□ -1.09
CLCC1-202ENST00000348264 ORMDL2Q53FV1 153 aa8.22□□□□□ -1.09
CLCC1-202ENST00000348264 AMELXQ99217 191 aa8.22□□□□□ -1.09
CLCC1-202ENST00000348264 IGIPA6NJ69 53 aa8.21□□□□□ -1.1
CLCC1-202ENST00000348264 C2orf88Q9BSF0 95 aa8.21□□□□□ -1.1
CLCC1-202ENST00000348264 NXT2Q9NPJ8 142 aaKnown RBP8.21□□□□□ -1.1
CLCC1-202ENST00000348264 UBR4Q5T4S7 5183 aa8.2□□□□□ -1.1
CLCC1-202ENST00000348264 FAM168BA1KXE4 195 aa8.2□□□□□ -1.1
CLCC1-202ENST00000348264 K7EMI3 77 aa8.2□□□□□ -1.1
CLCC1-202ENST00000348264 TLX1NBP0CAT3 122 aa8.2□□□□□ -1.1
CLCC1-202ENST00000348264 SPINK6Q6UWN8 80 aa8.2□□□□□ -1.1
CLCC1-202ENST00000348264 C2orf82Q6UX34 121 aa8.2□□□□□ -1.1
CLCC1-202ENST00000348264 Q6ZN92 141 aa8.2□□□□□ -1.1
CLCC1-202ENST00000348264 PHF5AQ7RTV0 110 aaKnown RBP8.2□□□□□ -1.1
CLCC1-202ENST00000348264 LINC01600Q96MT4 127 aa8.2□□□□□ -1.1
CLCC1-202ENST00000348264 TRAV9-1A0A075B6T8 112 aa8.19□□□□□ -1.1
CLCC1-202ENST00000348264 NPSP0C0P6 89 aa8.19□□□□□ -1.1
CLCC1-202ENST00000348264 SRSF9Q13242 221 aaKnown RBP eCLIP8.19□□□□□ -1.1
CLCC1-202ENST00000348264 SEC11CQ9BY50 192 aa8.19□□□□□ -1.1
CLCC1-202ENST00000348264 VCX2Q9H322 139 aa8.19□□□□□ -1.1
CLCC1-202ENST00000348264 PSORS1C2Q9UIG4 136 aa8.19□□□□□ -1.1
CLCC1-202ENST00000348264 ODF1Q14990 250 aa8.18□□□□□ -1.1
CLCC1-202ENST00000348264 GAGE2EQ4V326 116 aa8.18□□□□□ -1.1
CLCC1-202ENST00000348264 COMMD7Q86VX2 200 aa8.18□□□□□ -1.1
CLCC1-202ENST00000348264 GAGE2DQ9UEU5 116 aa8.18□□□□□ -1.1
CLCC1-202ENST00000348264 TRBV30A0A0K0K1B3 111 aa8.17□□□□□ -1.1
CLCC1-202ENST00000348264 MT-ND6P03923 174 aa8.17□□□□□ -1.1
CLCC1-202ENST00000348264 FAM19A5Q7Z5A7 132 aaPredicted RBP8.17□□□□□ -1.1
CLCC1-202ENST00000348264 FAM19A3Q7Z5A8 133 aa8.17□□□□□ -1.1
CLCC1-202ENST00000348264 LINC01561Q8N1V8 128 aa8.17□□□□□ -1.1
CLCC1-202ENST00000348264 TOMM6Q96B49 74 aa8.17□□□□□ -1.1
CLCC1-202ENST00000348264 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
CLCC1-202ENST00000348264 REG3GQ6UW15 175 aa8.16□□□□□ -1.1
CLCC1-202ENST00000348264 KRTAP11-1Q8IUC1 163 aa8.16□□□□□ -1.1
CLCC1-202ENST00000348264 KRTAP7-1Q8IUC3 87 aa8.16□□□□□ -1.1
CLCC1-202ENST00000348264 LRP2P98164 4655 aa8.15□□□□□ -1.1
CLCC1-202ENST00000348264 S100PP25815 95 aa8.15□□□□□ -1.1
CLCC1-202ENST00000348264 C1orf137Q5JT78 98 aa8.15□□□□□ -1.1
CLCC1-202ENST00000348264 GNB1LQ9BYB4 327 aa8.15□□□□□ -1.1
CLCC1-202ENST00000348264 TOMM7Q9P0U1 55 aa8.15□□□□□ -1.1
CLCC1-202ENST00000348264 CDKN2A-AS1Q9UH64 79 aa8.15□□□□□ -1.1
CLCC1-202ENST00000348264 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
CLCC1-202ENST00000348264 HERVK_113P63121 156 aa8.14□□□□□ -1.11
CLCC1-202ENST00000348264 PAPPA-AS1Q5QFB9 102 aa8.14□□□□□ -1.11
CLCC1-202ENST00000348264 C9orf129Q5T035 196 aaKnown RBP8.14□□□□□ -1.11
CLCC1-202ENST00000348264 PACRGQ96M98 296 aaPredicted RBP8.14□□□□□ -1.11
CLCC1-202ENST00000348264 ALKBH7Q9BT30 221 aaPredicted RBP8.14□□□□□ -1.11
CLCC1-202ENST00000348264 LINC01546A6NGU7 62 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms