RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 LINC00959A0A1B0GUT2 108 aa8.82□□□□□ -1
COL12A1-202ENST00000345356 A0A096LNI7 61 aa8.82□□□□□ -1
COL12A1-202ENST00000345356 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.82□□□□□ -1
COL12A1-202ENST00000345356 AMELXQ99217 191 aa8.82□□□□□ -1
COL12A1-202ENST00000345356 C9orf66Q5T8R8 295 aa8.81□□□□□ -1
COL12A1-202ENST00000345356 DEFB114Q30KQ6 69 aa8.81□□□□□ -1
COL12A1-202ENST00000345356 LOC100131303A0A0U1RQF7 123 aa8.81□□□□□ -1
COL12A1-202ENST00000345356 TMEM254Q8TBM7 123 aa8.8□□□□□ -1
COL12A1-202ENST00000345356 ZNF73O43830 326 aaPredicted RBP8.8□□□□□ -1
COL12A1-202ENST00000345356 CD164L2Q6UWJ8 174 aa8.8□□□□□ -1
COL12A1-202ENST00000345356 CHCHD7Q9BUK0 85 aa8.8□□□□□ -1
COL12A1-202ENST00000345356 SPG11Q96JI7 2443 aa8.8□□□□□ -1
COL12A1-202ENST00000345356 LINC01546A6NGU7 62 aa8.79□□□□□ -1
COL12A1-202ENST00000345356 ZNF843Q8N446 348 aa8.79□□□□□ -1
COL12A1-202ENST00000345356 IGKV2-28A0A075B6P5 120 aa8.79□□□□□ -1
COL12A1-202ENST00000345356 IGKV2D-28P01615 120 aa8.79□□□□□ -1
COL12A1-202ENST00000345356 COX17Q14061 63 aa8.79□□□□□ -1
COL12A1-202ENST00000345356 TNFRSF13BO14836 293 aaPredicted RBP8.79□□□□□ -1
COL12A1-202ENST00000345356 SBSPONQ8IVN8 264 aa8.79□□□□□ -1
COL12A1-202ENST00000345356 PRORYQ9H606 182 aa8.79□□□□□ -1
COL12A1-202ENST00000345356 C10orf99Q6UWK7 81 aa8.78□□□□□ -1
COL12A1-202ENST00000345356 Q8IZM0 81 aa8.78□□□□□ -1
COL12A1-202ENST00000345356 PTPRQQ9UMZ3 2332 aa8.78□□□□□ -1
COL12A1-202ENST00000345356 F8W735 103 aaPredicted RBP8.78□□□□□ -1
COL12A1-202ENST00000345356 M0R378 163 aa8.78□□□□□ -1
COL12A1-202ENST00000345356 PRR3P79522 188 aaKnown RBP8.78□□□□□ -1
COL12A1-202ENST00000345356 ESRGQ1W209 222 aa8.77□□□□□ -1
COL12A1-202ENST00000345356 IGKV2-24A0A0C4DH68 120 aa8.77□□□□□ -1.01
COL12A1-202ENST00000345356 FBXL19-AS1Q494R0 122 aa8.77□□□□□ -1.01
COL12A1-202ENST00000345356 B9D2Q9BPU9 175 aa8.77□□□□□ -1.01
COL12A1-202ENST00000345356 ATRXP46100 2492 aa8.77□□□□□ -1.01
COL12A1-202ENST00000345356 CASC2Q6XLA1 102 aa8.76□□□□□ -1.01
COL12A1-202ENST00000345356 Q6ZVQ6 151 aa8.76□□□□□ -1.01
COL12A1-202ENST00000345356 WFDC10AQ9H1F0 79 aa8.76□□□□□ -1.01
COL12A1-202ENST00000345356 Q8N9L7 120 aa8.76□□□□□ -1.01
COL12A1-202ENST00000345356 LINC00208Q96KT6 92 aa8.76□□□□□ -1.01
COL12A1-202ENST00000345356 IGF2-ASQ6U949 168 aa8.76□□□□□ -1.01
COL12A1-202ENST00000345356 SORL1Q92673 2214 aa8.75□□□□□ -1.01
COL12A1-202ENST00000345356 LINC01547P58512 204 aaPredicted RBP8.75□□□□□ -1.01
COL12A1-202ENST00000345356 DHRS4-AS1Q9P1J3 65 aa8.75□□□□□ -1.01
COL12A1-202ENST00000345356 TECTAO75443 2155 aa8.74□□□□□ -1.01
COL12A1-202ENST00000345356 BBC3Q96PG8 261 aaPredicted RBP8.74□□□□□ -1.01
COL12A1-202ENST00000345356 Q8NA96 180 aa8.73□□□□□ -1.01
COL12A1-202ENST00000345356 TRBV10-3A0A0K0K1G6 114 aa8.73□□□□□ -1.01
COL12A1-202ENST00000345356 LINC00337Q8N6G1 96 aa8.73□□□□□ -1.01
COL12A1-202ENST00000345356 SYCNQ0VAF6 134 aa8.72□□□□□ -1.01
COL12A1-202ENST00000345356 C9orf116Q5BN46 136 aaPredicted RBP8.72□□□□□ -1.01
COL12A1-202ENST00000345356 A0A087WZ39 114 aa8.72□□□□□ -1.01
COL12A1-202ENST00000345356 EDN2P20800 178 aa8.72□□□□□ -1.01
COL12A1-202ENST00000345356 FAM208BQ5VWN6 2430 aa8.71□□□□□ -1.01
COL12A1-202ENST00000345356 DEFB113Q30KQ7 82 aa8.71□□□□□ -1.02
COL12A1-202ENST00000345356 CYSRT1A8MQ03 144 aa8.7□□□□□ -1.02
COL12A1-202ENST00000345356 Q8N2B8 174 aa8.7□□□□□ -1.02
COL12A1-202ENST00000345356 CSPG4Q6UVK1 2322 aa8.7□□□□□ -1.02
COL12A1-202ENST00000345356 FHL3Q13643 280 aa8.7□□□□□ -1.02
COL12A1-202ENST00000345356 LINC00575Q6W349 94 aa8.7□□□□□ -1.02
COL12A1-202ENST00000345356 MUC7Q8TAX7 377 aa8.7□□□□□ -1.02
COL12A1-202ENST00000345356 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
COL12A1-202ENST00000345356 BEAN1Q3B7T3 259 aa8.69□□□□□ -1.02
COL12A1-202ENST00000345356 K7ERS5 55 aa8.69□□□□□ -1.02
COL12A1-202ENST00000345356 PRRC2AP48634 2157 aaKnown RBP8.69□□□□□ -1.02
COL12A1-202ENST00000345356 MRGPRG-AS1Q2M3A8 158 aa8.69□□□□□ -1.02
COL12A1-202ENST00000345356 IGLV1-40P01703 118 aa8.69□□□□□ -1.02
COL12A1-202ENST00000345356 CPAMD8Q8IZJ3 1885 aa8.68□□□□□ -1.02
COL12A1-202ENST00000345356 IGLV4-60A0A075B6I1 120 aa8.68□□□□□ -1.02
COL12A1-202ENST00000345356 DNAJC9-AS1A6NH13 148 aa8.68□□□□□ -1.02
COL12A1-202ENST00000345356 RPL37AP8A6NKH3 93 aa8.68□□□□□ -1.02
COL12A1-202ENST00000345356 CXCL6P80162 114 aa8.68□□□□□ -1.02
COL12A1-202ENST00000345356 NHLRC4P0CG21 123 aaPredicted RBP8.68□□□□□ -1.02
COL12A1-202ENST00000345356 COL5A1P20908 1838 aaPredicted RBP8.68□□□□□ -1.02
COL12A1-202ENST00000345356 MUC22E2RYF6 1773 aaPredicted RBP8.68□□□□□ -1.02
COL12A1-202ENST00000345356 KIF25-AS1Q9Y6Z4 181 aa8.68□□□□□ -1.02
COL12A1-202ENST00000345356 C1orf137Q5JT78 98 aa8.67□□□□□ -1.02
COL12A1-202ENST00000345356 Q6ZSN1 163 aa8.67□□□□□ -1.02
COL12A1-202ENST00000345356 Q6YL49 198 aa8.67□□□□□ -1.02
COL12A1-202ENST00000345356 FAM218AQ96MZ4 157 aa8.66□□□□□ -1.02
COL12A1-202ENST00000345356 IGHV4-30-4P0DP06 118 aa8.66□□□□□ -1.02
COL12A1-202ENST00000345356 IGHV4-31P0DP07 118 aa8.66□□□□□ -1.02
COL12A1-202ENST00000345356 C11orf71Q6IPW1 123 aa8.66□□□□□ -1.02
COL12A1-202ENST00000345356 ZFHX2Q9C0A1 2572 aaPredicted RBP8.66□□□□□ -1.02
COL12A1-202ENST00000345356 A8MTW9 85 aa8.65□□□□□ -1.02
COL12A1-202ENST00000345356 FAM19A4Q96LR4 140 aa8.65□□□□□ -1.02
COL12A1-202ENST00000345356 C18orf65Q6ZTR6 163 aa8.65□□□□□ -1.03
COL12A1-202ENST00000345356 PTPN13Q12923 2485 aa8.65□□□□□ -1.03
COL12A1-202ENST00000345356 BCE1O60756 84 aa8.64□□□□□ -1.03
COL12A1-202ENST00000345356 IGLV5-39A0A0G2JS06 123 aa8.63□□□□□ -1.03
COL12A1-202ENST00000345356 LTBP2Q14767 1821 aa8.63□□□□□ -1.03
COL12A1-202ENST00000345356 FHL2Q14192 279 aa8.63□□□□□ -1.03
COL12A1-202ENST00000345356 LELP1Q5T871 98 aa8.63□□□□□ -1.03
COL12A1-202ENST00000345356 SMCR5Q8TEV8 140 aa8.63□□□□□ -1.03
COL12A1-202ENST00000345356 EXPH5Q8NEV8 1989 aa8.62□□□□□ -1.03
COL12A1-202ENST00000345356 PLAC8L1A1L4L8 177 aa8.62□□□□□ -1.03
COL12A1-202ENST00000345356 LINC00482Q8N8I6 264 aa8.62□□□□□ -1.03
COL12A1-202ENST00000345356 TET2Q6N021 2002 aaPredicted RBP8.62□□□□□ -1.03
COL12A1-202ENST00000345356 LINC00315P59091 139 aa8.61□□□□□ -1.03
COL12A1-202ENST00000345356 PCOTHQ58A44 107 aa8.61□□□□□ -1.03
COL12A1-202ENST00000345356 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
COL12A1-202ENST00000345356 ZNF702PQ9H963 129 aa8.61□□□□□ -1.03
COL12A1-202ENST00000345356 PTPRSQ13332 1948 aa8.61□□□□□ -1.03
COL12A1-202ENST00000345356 ACACBO00763 2458 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms