RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 Q8N814 137 aa7.83□□□□□ -1.16
SNCA-202ENST00000345009 MAPKAPK5-AS1Q8N8E1 139 aa7.83□□□□□ -1.16
SNCA-202ENST00000345009 KRTAP4-2Q9BYR5 136 aa7.83□□□□□ -1.16
SNCA-202ENST00000345009 IGLV4-3A0A075B6K6 122 aa7.82□□□□□ -1.16
SNCA-202ENST00000345009 USP17L23D6RBM5 183 aa7.82□□□□□ -1.16
SNCA-202ENST00000345009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.82□□□□□ -1.16
SNCA-202ENST00000345009 LECT2O14960 151 aa7.82□□□□□ -1.16
SNCA-202ENST00000345009 HBDP02042 147 aa7.82□□□□□ -1.16
SNCA-202ENST00000345009 SEC11AP67812 179 aa7.82□□□□□ -1.16
SNCA-202ENST00000345009 OPRPNQ99935 248 aaPredicted RBP7.82□□□□□ -1.16
SNCA-202ENST00000345009 C16orf90A8MZG2 172 aa7.81□□□□□ -1.16
SNCA-202ENST00000345009 MALP21145 153 aa7.81□□□□□ -1.16
SNCA-202ENST00000345009 KRTAP26-1Q6PEX3 210 aa7.81□□□□□ -1.16
SNCA-202ENST00000345009 IGLV5-52A0A0A0MRZ9 124 aa7.8□□□□□ -1.16
SNCA-202ENST00000345009 COX7A2LO14548 114 aa7.8□□□□□ -1.16
SNCA-202ENST00000345009 HSBP1O75506 76 aa7.8□□□□□ -1.16
SNCA-202ENST00000345009 ATP5LO75964 103 aa7.8□□□□□ -1.16
SNCA-202ENST00000345009 APOMO95445 188 aa7.8□□□□□ -1.16
SNCA-202ENST00000345009 IGHV1-58A0A0C4DH39 117 aa7.79□□□□□ -1.16
SNCA-202ENST00000345009 FOXI1Q12951 378 aa7.79□□□□□ -1.16
SNCA-202ENST00000345009 FAM104AQ969W3 186 aa7.79□□□□□ -1.16
SNCA-202ENST00000345009 AMELXQ99217 191 aa7.79□□□□□ -1.16
SNCA-202ENST00000345009 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.78□□□□□ -1.16
SNCA-202ENST00000345009 hDV102S1A0JD36 115 aa7.78□□□□□ -1.16
SNCA-202ENST00000345009 KRTAP10-2P60368 255 aa7.78□□□□□ -1.16
SNCA-202ENST00000345009 WFDC2Q14508 124 aa7.78□□□□□ -1.16
SNCA-202ENST00000345009 URB1-AS1Q96HZ7 61 aa7.78□□□□□ -1.16
SNCA-202ENST00000345009 FAT2Q9NYQ8 4349 aa7.78□□□□□ -1.16
SNCA-202ENST00000345009 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.77□□□□□ -1.17
SNCA-202ENST00000345009 GCSHP23434 173 aa7.77□□□□□ -1.17
SNCA-202ENST00000345009 UBE2D1P51668 147 aa7.77□□□□□ -1.17
SNCA-202ENST00000345009 NDUFA6P56556 154 aa7.77□□□□□ -1.17
SNCA-202ENST00000345009 PMVKQ15126 192 aa7.77□□□□□ -1.17
SNCA-202ENST00000345009 PMCHL1Q16048 86 aa7.77□□□□□ -1.17
SNCA-202ENST00000345009 GEMIN7Q9H840 131 aaKnown RBP7.77□□□□□ -1.17
SNCA-202ENST00000345009 ZNF561-AS1K7EIQ3 104 aa7.76□□□□□ -1.17
SNCA-202ENST00000345009 PRSS1P07477 247 aa7.76□□□□□ -1.17
SNCA-202ENST00000345009 HERVK_113P63121 156 aa7.76□□□□□ -1.17
SNCA-202ENST00000345009 PDZD11Q5EBL8 140 aa7.76□□□□□ -1.17
SNCA-202ENST00000345009 LINC00242Q5T6M2 205 aa7.76□□□□□ -1.17
SNCA-202ENST00000345009 C5orf38Q86SI9 138 aa7.76□□□□□ -1.17
SNCA-202ENST00000345009 CST9LQ9H4G1 147 aa7.76□□□□□ -1.17
SNCA-202ENST00000345009 HECTD4Q9Y4D8 3996 aa7.76□□□□□ -1.17
SNCA-202ENST00000345009 IGHV3OR16-9A0A0B4J2B5 98 aa7.75□□□□□ -1.17
SNCA-202ENST00000345009 SERF1AO75920 110 aa7.75□□□□□ -1.17
SNCA-202ENST00000345009 LINC00173Q6ZV60 143 aa7.75□□□□□ -1.17
SNCA-202ENST00000345009 A0A087WZ39 114 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 A0A096LNJ9 63 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 GVQW2A0A096LPI5 108 aaPredicted RBP7.74□□□□□ -1.17
SNCA-202ENST00000345009 HIST1H2BKO60814 126 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 HIST1H2BJP06899 126 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 HIST1H2BOP23527 126 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 HIST1H2BBP33778 126 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 HIST1H2BDP58876 126 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 CNBPP62633 177 aaKnown RBP7.74□□□□□ -1.17
SNCA-202ENST00000345009 HIST1H2BCP62807 126 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 HIST2H2BEQ16778 126 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.74□□□□□ -1.17
SNCA-202ENST00000345009 ZC2HC1BQ5TFG8 222 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 FAM19A3Q7Z5A8 133 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 LINC01561Q8N1V8 128 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 C15orf56Q8N910 161 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 HIST1H2BHQ93079 126 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 HIST1H2BNQ99877 126 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 HIST1H2BMQ99879 126 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 HSPB8Q9UJY1 196 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 PKD1P98161 4303 aa7.74□□□□□ -1.17
SNCA-202ENST00000345009 LEPROTL1O95214 131 aa7.73□□□□□ -1.17
SNCA-202ENST00000345009 HIGD2BQ4VC39 106 aa7.73□□□□□ -1.17
SNCA-202ENST00000345009 FAM19A2Q8N3H0 131 aa7.73□□□□□ -1.17
SNCA-202ENST00000345009 OR10D4PQ8NGN7 298 aa7.73□□□□□ -1.17
SNCA-202ENST00000345009 IFI27L1Q96BM0 104 aa7.73□□□□□ -1.17
SNCA-202ENST00000345009 PACRGQ96M98 296 aaPredicted RBP7.73□□□□□ -1.17
SNCA-202ENST00000345009 PLA2G2DQ9UNK4 145 aa7.73□□□□□ -1.17
SNCA-202ENST00000345009 PKIGQ9Y2B9 76 aa7.73□□□□□ -1.17
SNCA-202ENST00000345009 EPPK1P58107 5090 aaKnown RBP7.73□□□□□ -1.17
SNCA-202ENST00000345009 PKHD1P08F94 4074 aa7.73□□□□□ -1.17
SNCA-202ENST00000345009 IGHV3-64A0A075B6Q5 118 aa7.72□□□□□ -1.17
SNCA-202ENST00000345009 A0A0J9YXV3 536 aa7.72□□□□□ -1.17
SNCA-202ENST00000345009 TINCRA0A1B0GVN0 87 aa7.72□□□□□ -1.17
SNCA-202ENST00000345009 F8WDY8 70 aa7.72□□□□□ -1.17
SNCA-202ENST00000345009 H3BRM9 83 aa7.71□□□□□ -1.18
SNCA-202ENST00000345009 FUSP35637 526 aaKnown RBP eCLIP7.71□□□□□ -1.18
SNCA-202ENST00000345009 COX6A2Q02221 97 aa7.71□□□□□ -1.18
SNCA-202ENST00000345009 ORAOV1Q8WV07 137 aa7.71□□□□□ -1.18
SNCA-202ENST00000345009 C2orf48Q96LS8 159 aa7.71□□□□□ -1.18
SNCA-202ENST00000345009 PRSS2P07478 247 aa7.7□□□□□ -1.18
SNCA-202ENST00000345009 SPAG11BQ08648 103 aa7.7□□□□□ -1.18
SNCA-202ENST00000345009 SYCNQ0VAF6 134 aa7.7□□□□□ -1.18
SNCA-202ENST00000345009 C9orf163Q8N9P6 203 aa7.7□□□□□ -1.18
SNCA-202ENST00000345009 DNAH11Q96DT5 4516 aa7.7□□□□□ -1.18
SNCA-202ENST00000345009 IGLV4-69A0A075B6H9 119 aa7.69□□□□□ -1.18
SNCA-202ENST00000345009 TRAV12-1A0A0B4J245 112 aa7.69□□□□□ -1.18
SNCA-202ENST00000345009 FABP4P15090 132 aa7.69□□□□□ -1.18
SNCA-202ENST00000345009 CAMK2N2Q96S95 79 aa7.69□□□□□ -1.18
SNCA-202ENST00000345009 CDKN2A-AS1Q9UH64 79 aa7.69□□□□□ -1.18
SNCA-202ENST00000345009 CHTOPQ9Y3Y2 248 aaKnown RBP7.69□□□□□ -1.18
SNCA-202ENST00000345009 IGLV5-45A0A087WSX0 123 aa7.68□□□□□ -1.18
SNCA-202ENST00000345009 NUPR1O60356 82 aa7.68□□□□□ -1.18
SNCA-202ENST00000345009 IGLC3P0DOY3 106 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms