RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 TMEM243Q9BU79 118 aa9.55□□□□□ -0.88
MS4A4A-202ENST00000343968 CSDC2Q9Y534 153 aaKnown RBP9.55□□□□□ -0.88
MS4A4A-202ENST00000343968 SMAGPQ0VAQ4 97 aa9.54□□□□□ -0.88
MS4A4A-202ENST00000343968 SCGB1D4Q6XE38 83 aa9.54□□□□□ -0.88
MS4A4A-202ENST00000343968 UBE2D4Q9Y2X8 147 aa9.54□□□□□ -0.88
MS4A4A-202ENST00000343968 C15orf53Q8NAA6 179 aa9.53□□□□□ -0.88
MS4A4A-202ENST00000343968 MEGF8Q7Z7M0 2845 aa9.53□□□□□ -0.88
MS4A4A-202ENST00000343968 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.52□□□□□ -0.89
MS4A4A-202ENST00000343968 IGKV2-29A2NJV5 120 aaPredicted RBP9.52□□□□□ -0.89
MS4A4A-202ENST00000343968 COL7A1Q02388 2944 aa9.52□□□□□ -0.89
MS4A4A-202ENST00000343968 TRBV20-1A0A075B6N2 111 aa9.51□□□□□ -0.89
MS4A4A-202ENST00000343968 MRPS36P82909 103 aaKnown RBP9.51□□□□□ -0.89
MS4A4A-202ENST00000343968 C21orf62-AS1Q17RA5 79 aa9.51□□□□□ -0.89
MS4A4A-202ENST00000343968 LELP1Q5T871 98 aa9.51□□□□□ -0.89
MS4A4A-202ENST00000343968 FAM104AQ969W3 186 aa9.51□□□□□ -0.89
MS4A4A-202ENST00000343968 IGLV4-3A0A075B6K6 122 aa9.51□□□□□ -0.89
MS4A4A-202ENST00000343968 SRSF9Q13242 221 aaKnown RBP eCLIP9.51□□□□□ -0.89
MS4A4A-202ENST00000343968 LYPD5Q6UWN5 251 aa9.51□□□□□ -0.89
MS4A4A-202ENST00000343968 PLEKHB2Q96CS7 222 aa9.51□□□□□ -0.89
MS4A4A-202ENST00000343968 PRO0461Q9UI25 63 aa9.51□□□□□ -0.89
MS4A4A-202ENST00000343968 UBE2L6O14933 153 aa9.5□□□□□ -0.89
MS4A4A-202ENST00000343968 LEPROTO15243 131 aa9.5□□□□□ -0.89
MS4A4A-202ENST00000343968 AMELXQ99217 191 aa9.5□□□□□ -0.89
MS4A4A-202ENST00000343968 VCX2Q9H322 139 aa9.5□□□□□ -0.89
MS4A4A-202ENST00000343968 DYNC2H1Q8NCM8 4307 aaKnown RBP9.5□□□□□ -0.89
MS4A4A-202ENST00000343968 RPL24P83731 157 aaKnown RBP9.49□□□□□ -0.89
MS4A4A-202ENST00000343968 A0A1B0GUV1 79 aa9.48□□□□□ -0.89
MS4A4A-202ENST00000343968 H3BMG7 143 aa9.48□□□□□ -0.89
MS4A4A-202ENST00000343968 J3QQQ9 107 aa9.48□□□□□ -0.89
MS4A4A-202ENST00000343968 M0QXV9 152 aa9.48□□□□□ -0.89
MS4A4A-202ENST00000343968 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
MS4A4A-202ENST00000343968 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
MS4A4A-202ENST00000343968 IGHV3-30P01768 117 aa9.48□□□□□ -0.89
MS4A4A-202ENST00000343968 IGHV3-30-5P0DP03 117 aa9.48□□□□□ -0.89
MS4A4A-202ENST00000343968 LGALS3P17931 250 aaKnown RBP9.48□□□□□ -0.89
MS4A4A-202ENST00000343968 CEMP1Q6PRD7 247 aaPredicted RBP9.48□□□□□ -0.89
MS4A4A-202ENST00000343968 CHCHD5Q9BSY4 110 aa9.48□□□□□ -0.89
MS4A4A-202ENST00000343968 OPRPNQ99935 248 aaPredicted RBP9.47□□□□□ -0.89
MS4A4A-202ENST00000343968 CDC42SE2Q9NRR3 84 aa9.47□□□□□ -0.89
MS4A4A-202ENST00000343968 DNAH7Q8WXX0 4024 aa9.47□□□□□ -0.89
MS4A4A-202ENST00000343968 GAGE6Q13070 117 aa9.46□□□□□ -0.89
MS4A4A-202ENST00000343968 ESRGQ1W209 222 aa9.46□□□□□ -0.89
MS4A4A-202ENST00000343968 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.89
MS4A4A-202ENST00000343968 DGAT2L7PQ6IED9 249 aa9.46□□□□□ -0.89
MS4A4A-202ENST00000343968 C10orf126Q8N4M7 172 aa9.46□□□□□ -0.89
MS4A4A-202ENST00000343968 TMEM101Q96IK0 257 aa9.46□□□□□ -0.89
MS4A4A-202ENST00000343968 A0A0B4J2C4 111 aa9.45□□□□□ -0.9
MS4A4A-202ENST00000343968 TMEM238C9JI98 176 aa9.45□□□□□ -0.9
MS4A4A-202ENST00000343968 TSPAN13O95857 204 aa9.45□□□□□ -0.9
MS4A4A-202ENST00000343968 WFDC2Q14508 124 aa9.45□□□□□ -0.9
MS4A4A-202ENST00000343968 Q6ZUT4 128 aa9.45□□□□□ -0.9
MS4A4A-202ENST00000343968 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.45□□□□□ -0.9
MS4A4A-202ENST00000343968 NUPR2A6NF83 97 aa9.45□□□□□ -0.9
MS4A4A-202ENST00000343968 ZNF22P17026 224 aaPredicted RBP9.44□□□□□ -0.9
MS4A4A-202ENST00000343968 FAM19A3Q7Z5A8 133 aa9.44□□□□□ -0.9
MS4A4A-202ENST00000343968 SIGMAR1Q99720 223 aa9.44□□□□□ -0.9
MS4A4A-202ENST00000343968 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
MS4A4A-202ENST00000343968 IGLV4-60A0A075B6I1 120 aa9.43□□□□□ -0.9
MS4A4A-202ENST00000343968 LINC01600Q96MT4 127 aa9.43□□□□□ -0.9
MS4A4A-202ENST00000343968 STAB2Q8WWQ8 2551 aa9.43□□□□□ -0.9
MS4A4A-202ENST00000343968 GAGE12HA6NDE8 117 aa9.42□□□□□ -0.9
MS4A4A-202ENST00000343968 TSPEAR-AS2P59090 65 aa9.42□□□□□ -0.9
MS4A4A-202ENST00000343968 ETDBQ3ZM63 59 aa9.42□□□□□ -0.9
MS4A4A-202ENST00000343968 APLNQ9ULZ1 77 aa9.42□□□□□ -0.9
MS4A4A-202ENST00000343968 TMEM262E9PQX1 116 aa9.42□□□□□ -0.9
MS4A4A-202ENST00000343968 CFC1BP0CG36 223 aa9.42□□□□□ -0.9
MS4A4A-202ENST00000343968 CFC1P0CG37 223 aa9.42□□□□□ -0.9
MS4A4A-202ENST00000343968 KLK5Q9Y337 293 aaPredicted RBP9.42□□□□□ -0.9
MS4A4A-202ENST00000343968 APOMO95445 188 aa9.41□□□□□ -0.9
MS4A4A-202ENST00000343968 FBN3Q75N90 2809 aa9.4□□□□□ -0.9
MS4A4A-202ENST00000343968 TINCRA0A1B0GVN0 87 aa9.4□□□□□ -0.9
MS4A4A-202ENST00000343968 CCL18P55774 89 aa9.4□□□□□ -0.9
MS4A4A-202ENST00000343968 FOXI1Q12951 378 aa9.4□□□□□ -0.9
MS4A4A-202ENST00000343968 RNASE13Q5GAN3 156 aaKnown RBP9.4□□□□□ -0.9
MS4A4A-202ENST00000343968 UPK3BQ9BT76 320 aa9.4□□□□□ -0.9
MS4A4A-202ENST00000343968 TIMM17BO60830 172 aa9.39□□□□□ -0.91
MS4A4A-202ENST00000343968 TEN1Q86WV5 123 aa9.39□□□□□ -0.91
MS4A4A-202ENST00000343968 PPDPFLQ8WWR9 84 aa9.39□□□□□ -0.91
MS4A4A-202ENST00000343968 SPANXDQ9BXN6 97 aa9.39□□□□□ -0.91
MS4A4A-202ENST00000343968 SPANXCQ9NY87 97 aa9.39□□□□□ -0.91
MS4A4A-202ENST00000343968 LINC00588Q9Y4M8 146 aa9.39□□□□□ -0.91
MS4A4A-202ENST00000343968 LINC01556Q5JQF7 62 aa9.39□□□□□ -0.91
MS4A4A-202ENST00000343968 WFDC10BQ8IUB3 73 aa9.39□□□□□ -0.91
MS4A4A-202ENST00000343968 IGHV1-58A0A0C4DH39 117 aa9.38□□□□□ -0.91
MS4A4A-202ENST00000343968 LOC107984156A0A0G2JMH3 177 aa9.38□□□□□ -0.91
MS4A4A-202ENST00000343968 A0A0J9YXV3 536 aa9.38□□□□□ -0.91
MS4A4A-202ENST00000343968 A0A0J9YXY3 114 aa9.38□□□□□ -0.91
MS4A4A-202ENST00000343968 ARL17AQ8IVW1 177 aa9.38□□□□□ -0.91
MS4A4A-202ENST00000343968 IGLV5-45A0A087WSX0 123 aa9.37□□□□□ -0.91
MS4A4A-202ENST00000343968 IGHV3-33P01772 117 aa9.37□□□□□ -0.91
MS4A4A-202ENST00000343968 DNAH10OSP0CZ25 163 aa9.37□□□□□ -0.91
MS4A4A-202ENST00000343968 PRR34Q9NV39 138 aa9.37□□□□□ -0.91
MS4A4A-202ENST00000343968 IGHV3-30-3P0DP02 117 aa9.36□□□□□ -0.91
MS4A4A-202ENST00000343968 IFITM1P13164 125 aa9.36□□□□□ -0.91
MS4A4A-202ENST00000343968 PSMB2P49721 201 aa9.36□□□□□ -0.91
MS4A4A-202ENST00000343968 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
MS4A4A-202ENST00000343968 LINC00242Q5T6M2 205 aa9.36□□□□□ -0.91
MS4A4A-202ENST00000343968 Q8N3U1 123 aa9.36□□□□□ -0.91
MS4A4A-202ENST00000343968 PPDPFQ9H3Y8 114 aa9.36□□□□□ -0.91
MS4A4A-202ENST00000343968 ERG28Q9UKR5 140 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms