RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 BOD1L2Q8IYS8 172 aa11.89□□□□□ -0.51
CLDN4-201ENST00000340958 LINC00269Q8N2A0 174 aa11.89□□□□□ -0.51
CLDN4-201ENST00000340958 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
CLDN4-201ENST00000340958 IGHV3-64A0A075B6Q5 118 aa11.88□□□□□ -0.51
CLDN4-201ENST00000340958 IGKV2D-26A0A0A0MRZ7 120 aa11.88□□□□□ -0.51
CLDN4-201ENST00000340958 IGHV3-30P01768 117 aa11.88□□□□□ -0.51
CLDN4-201ENST00000340958 IGHV3-33P01772 117 aa11.88□□□□□ -0.51
CLDN4-201ENST00000340958 IGHV3-30-3P0DP02 117 aa11.88□□□□□ -0.51
CLDN4-201ENST00000340958 IGHV3-30-5P0DP03 117 aa11.88□□□□□ -0.51
CLDN4-201ENST00000340958 PCP4P48539 62 aa11.88□□□□□ -0.51
CLDN4-201ENST00000340958 CCL18P55774 89 aa11.88□□□□□ -0.51
CLDN4-201ENST00000340958 SS18Q15532 418 aa11.88□□□□□ -0.51
CLDN4-201ENST00000340958 Q8N3U1 123 aa11.88□□□□□ -0.51
CLDN4-201ENST00000340958 E9PLD3 99 aa11.87□□□□□ -0.51
CLDN4-201ENST00000340958 WFDC10BQ8IUB3 73 aa11.87□□□□□ -0.51
CLDN4-201ENST00000340958 TMEM223A0PJW6 202 aa11.86□□□□□ -0.51
CLDN4-201ENST00000340958 PCP2Q8IVA1 136 aa11.86□□□□□ -0.51
CLDN4-201ENST00000340958 MUC7Q8TAX7 377 aa11.86□□□□□ -0.51
CLDN4-201ENST00000340958 STARD9Q9P2P6 4700 aa11.86□□□□□ -0.51
CLDN4-201ENST00000340958 SIVA1O15304 175 aa11.86□□□□□ -0.51
CLDN4-201ENST00000340958 COX6A2Q02221 97 aa11.86□□□□□ -0.51
CLDN4-201ENST00000340958 REG3AQ06141 175 aa11.86□□□□□ -0.51
CLDN4-201ENST00000340958 CDKN2A-AS1Q9UH64 79 aa11.86□□□□□ -0.51
CLDN4-201ENST00000340958 LINC00959A0A1B0GUT2 108 aa11.85□□□□□ -0.51
CLDN4-201ENST00000340958 FAM19A3Q7Z5A8 133 aa11.85□□□□□ -0.51
CLDN4-201ENST00000340958 KLK12Q9UKR0 248 aa11.85□□□□□ -0.51
CLDN4-201ENST00000340958 SPINK8P0C7L1 97 aa11.84□□□□□ -0.51
CLDN4-201ENST00000340958 LGALS3P17931 250 aaKnown RBP11.84□□□□□ -0.51
CLDN4-201ENST00000340958 NUPR2A6NF83 97 aa11.83□□□□□ -0.51
CLDN4-201ENST00000340958 CRPP02741 224 aa11.83□□□□□ -0.51
CLDN4-201ENST00000340958 TTTY13Q9BZ97 58 aa11.83□□□□□ -0.51
CLDN4-201ENST00000340958 KLK5Q9Y337 293 aaPredicted RBP11.83□□□□□ -0.51
CLDN4-201ENST00000340958 XCL1P47992 114 aa11.83□□□□□ -0.52
CLDN4-201ENST00000340958 LINC00588Q9Y4M8 146 aa11.82□□□□□ -0.52
CLDN4-201ENST00000340958 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
CLDN4-201ENST00000340958 TRAV8-3A0A0A6YYJ7 113 aa11.81□□□□□ -0.52
CLDN4-201ENST00000340958 C3orf84H3BNL1 204 aa11.81□□□□□ -0.52
CLDN4-201ENST00000340958 LEPROTO15243 131 aa11.81□□□□□ -0.52
CLDN4-201ENST00000340958 HSD52Q0P140 79 aa11.81□□□□□ -0.52
CLDN4-201ENST00000340958 PLEKHB2Q96CS7 222 aa11.81□□□□□ -0.52
CLDN4-201ENST00000340958 IGLV10-54A0A075B6I4 117 aa11.81□□□□□ -0.52
CLDN4-201ENST00000340958 IGHV1-58A0A0C4DH39 117 aa11.81□□□□□ -0.52
CLDN4-201ENST00000340958 J3QQQ9 107 aa11.81□□□□□ -0.52
CLDN4-201ENST00000340958 ZFAND6Q6FIF0 208 aa11.81□□□□□ -0.52
CLDN4-201ENST00000340958 MYMXA0A1B0GTQ4 84 aa11.8□□□□□ -0.52
CLDN4-201ENST00000340958 ZNF815PA8K554 130 aa11.8□□□□□ -0.52
CLDN4-201ENST00000340958 CASC10Q5T4H9 136 aa11.8□□□□□ -0.52
CLDN4-201ENST00000340958 UBE2WQ96B02 151 aa11.8□□□□□ -0.52
CLDN4-201ENST00000340958 TENM2Q9NT68 2774 aa11.8□□□□□ -0.52
CLDN4-201ENST00000340958 KMT2CQ8NEZ4 4911 aaKnown RBP11.79□□□□□ -0.52
CLDN4-201ENST00000340958 A6NDN8 102 aa11.79□□□□□ -0.52
CLDN4-201ENST00000340958 UBE2DNLQ8IWF7 75 aa11.79□□□□□ -0.52
CLDN4-201ENST00000340958 MAPKAPK5-AS1Q8N8E1 139 aa11.79□□□□□ -0.52
CLDN4-201ENST00000340958 LINC01556Q5JQF7 62 aa11.79□□□□□ -0.52
CLDN4-201ENST00000340958 CHCHD10Q8WYQ3 142 aaPredicted RBP11.79□□□□□ -0.52
CLDN4-201ENST00000340958 C9orf118A6NHY6 69 aa11.78□□□□□ -0.52
CLDN4-201ENST00000340958 SCGB1D4Q6XE38 83 aa11.78□□□□□ -0.52
CLDN4-201ENST00000340958 C5orf38Q86SI9 138 aa11.78□□□□□ -0.52
CLDN4-201ENST00000340958 TSPEAR-AS2P59090 65 aa11.76□□□□□ -0.53
CLDN4-201ENST00000340958 APLNQ9ULZ1 77 aa11.76□□□□□ -0.53
CLDN4-201ENST00000340958 IGHV3OR16-9A0A0B4J2B5 98 aa11.76□□□□□ -0.53
CLDN4-201ENST00000340958 SMIM1B2RUZ4 78 aa11.76□□□□□ -0.53
CLDN4-201ENST00000340958 CD164L2Q6UWJ8 174 aa11.76□□□□□ -0.53
CLDN4-201ENST00000340958 ENHOQ6UWT2 76 aa11.76□□□□□ -0.53
CLDN4-201ENST00000340958 PRR34Q9NV39 138 aa11.76□□□□□ -0.53
CLDN4-201ENST00000340958 HIGD1BQ9P298 99 aa11.76□□□□□ -0.53
CLDN4-201ENST00000340958 DNAH10OSP0CZ25 163 aa11.75□□□□□ -0.53
CLDN4-201ENST00000340958 MALP21145 153 aa11.75□□□□□ -0.53
CLDN4-201ENST00000340958 A0A087WZ39 114 aa11.74□□□□□ -0.53
CLDN4-201ENST00000340958 OCIAD2Q56VL3 154 aa11.74□□□□□ -0.53
CLDN4-201ENST00000340958 TOMM7Q9P0U1 55 aa11.74□□□□□ -0.53
CLDN4-201ENST00000340958 LYSTQ99698 3801 aa11.74□□□□□ -0.53
CLDN4-201ENST00000340958 TRAV8-4A0A0B4J246 113 aa11.74□□□□□ -0.53
CLDN4-201ENST00000340958 COX7A2LO14548 114 aa11.74□□□□□ -0.53
CLDN4-201ENST00000340958 MIAQ16674 131 aa11.74□□□□□ -0.53
CLDN4-201ENST00000340958 GAGE12HA6NDE8 117 aa11.73□□□□□ -0.53
CLDN4-201ENST00000340958 GAGE10A6NGK3 116 aa11.73□□□□□ -0.53
CLDN4-201ENST00000340958 UPK3BQ9BT76 320 aa11.72□□□□□ -0.53
CLDN4-201ENST00000340958 Q9H8V8 135 aa11.72□□□□□ -0.53
CLDN4-201ENST00000340958 NDUFA12Q9UI09 145 aa11.72□□□□□ -0.53
CLDN4-201ENST00000340958 IGLV5-39A0A0G2JS06 123 aa11.72□□□□□ -0.53
CLDN4-201ENST00000340958 GTF2H5Q6ZYL4 71 aa11.72□□□□□ -0.53
CLDN4-201ENST00000340958 H3BUT2 72 aa11.71□□□□□ -0.54
CLDN4-201ENST00000340958 K7EP34 96 aa11.71□□□□□ -0.54
CLDN4-201ENST00000340958 C21orf62-AS1Q17RA5 79 aa11.71□□□□□ -0.54
CLDN4-201ENST00000340958 PLECQ15149 4684 aaKnown RBP11.7□□□□□ -0.54
CLDN4-201ENST00000340958 DYNC2H1Q8NCM8 4307 aaKnown RBP11.7□□□□□ -0.54
CLDN4-201ENST00000340958 PRSS2P07478 247 aa11.7□□□□□ -0.54
CLDN4-201ENST00000340958 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
CLDN4-201ENST00000340958 Q9HAA7 133 aa11.7□□□□□ -0.54
CLDN4-201ENST00000340958 K7ERU9 68 aa11.7□□□□□ -0.54
CLDN4-201ENST00000340958 FOXI1Q12951 378 aa11.7□□□□□ -0.54
CLDN4-201ENST00000340958 C10orf126Q8N4M7 172 aa11.7□□□□□ -0.54
CLDN4-201ENST00000340958 C1orf43Q9BWL3 253 aa11.7□□□□□ -0.54
CLDN4-201ENST00000340958 IGKV2D-24A0A075B6R9 120 aa11.68□□□□□ -0.54
CLDN4-201ENST00000340958 RNF151Q2KHN1 245 aa11.68□□□□□ -0.54
CLDN4-201ENST00000340958 HIST1H4GQ99525 98 aa11.68□□□□□ -0.54
CLDN4-201ENST00000340958 A0A1W2PPM0 123 aa11.67□□□□□ -0.54
CLDN4-201ENST00000340958 APOMO95445 188 aa11.67□□□□□ -0.54
CLDN4-201ENST00000340958 SRSF9Q13242 221 aaKnown RBP eCLIP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms