RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 C6orf226Q5I0X4 101 aa6.83□□□□□ -1.32
TRERF1-201ENST00000340840 IMUPQ9GZP8 106 aa6.83□□□□□ -1.32
TRERF1-201ENST00000340840 TRAV25A0A0B4J276 109 aa6.83□□□□□ -1.32
TRERF1-201ENST00000340840 IGHV4-31P0DP07 118 aa6.83□□□□□ -1.32
TRERF1-201ENST00000340840 DEFB114Q30KQ6 69 aa6.83□□□□□ -1.32
TRERF1-201ENST00000340840 HIST2H2BDQ6DRA6 164 aa6.83□□□□□ -1.32
TRERF1-201ENST00000340840 COX7B2Q8TF08 81 aa6.83□□□□□ -1.32
TRERF1-201ENST00000340840 FLNAP21333 2647 aaKnown RBP6.83□□□□□ -1.32
TRERF1-201ENST00000340840 PFN2P35080 140 aa6.83□□□□□ -1.32
TRERF1-201ENST00000340840 TMEM126AQ9H061 195 aa6.83□□□□□ -1.32
TRERF1-201ENST00000340840 H0YGX0 51 aa6.82□□□□□ -1.32
TRERF1-201ENST00000340840 EIF4EBP3O60516 100 aaPredicted RBP6.82□□□□□ -1.32
TRERF1-201ENST00000340840 BEAN1Q3B7T3 259 aa6.82□□□□□ -1.32
TRERF1-201ENST00000340840 MIR7-3HGQ8N6C7 128 aa6.82□□□□□ -1.32
TRERF1-201ENST00000340840 RPL35AP18077 110 aaKnown RBP6.82□□□□□ -1.32
TRERF1-201ENST00000340840 Q6ZTI0 123 aa6.82□□□□□ -1.32
TRERF1-201ENST00000340840 SMIM1B2RUZ4 78 aa6.81□□□□□ -1.32
TRERF1-201ENST00000340840 ITPR1Q14643 2758 aa6.81□□□□□ -1.32
TRERF1-201ENST00000340840 ATP5G1P05496 136 aa6.81□□□□□ -1.32
TRERF1-201ENST00000340840 COX6A2Q02221 97 aa6.81□□□□□ -1.32
TRERF1-201ENST00000340840 C11orf68Q9H3H3 251 aaKnown RBP6.81□□□□□ -1.32
TRERF1-201ENST00000340840 MALP21145 153 aa6.8□□□□□ -1.32
TRERF1-201ENST00000340840 C18orf65Q6ZTR6 163 aa6.8□□□□□ -1.32
TRERF1-201ENST00000340840 Q9UF83 564 aa6.8□□□□□ -1.32
TRERF1-201ENST00000340840 IGLV5-45A0A087WSX0 123 aa6.8□□□□□ -1.32
TRERF1-201ENST00000340840 FAM222AQ5U5X8 452 aa6.8□□□□□ -1.32
TRERF1-201ENST00000340840 Q9HAA7 133 aa6.8□□□□□ -1.32
TRERF1-201ENST00000340840 IGLV5-39A0A0G2JS06 123 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 CFAP161Q6P656 301 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 CSDC2Q9Y534 153 aaKnown RBP6.79□□□□□ -1.32
TRERF1-201ENST00000340840 CCL24O00175 119 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 S100A7L2Q5SY68 101 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 SVIPQ8NHG7 77 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 C16orf74Q96GX8 76 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 STAB1Q9NY15 2570 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 SS18Q15532 418 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 CDC42SE2Q9NRR3 84 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 LRBAP50851 2863 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 TRBV7-7A0A0K0K1E9 115 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 RNASE1P07998 156 aaKnown RBP6.79□□□□□ -1.32
TRERF1-201ENST00000340840 C5orf38Q86SI9 138 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 C11orf72Q8NBR9 251 aa6.79□□□□□ -1.32
TRERF1-201ENST00000340840 NDUFA7O95182 113 aa6.78□□□□□ -1.32
TRERF1-201ENST00000340840 LINC00694P0DN24 101 aa6.78□□□□□ -1.32
TRERF1-201ENST00000340840 LINC01600Q96MT4 127 aa6.78□□□□□ -1.32
TRERF1-201ENST00000340840 CITED2Q99967 270 aaPredicted RBP6.78□□□□□ -1.32
TRERF1-201ENST00000340840 ATOX1O00244 68 aa6.78□□□□□ -1.32
TRERF1-201ENST00000340840 NHLRC4P0CG21 123 aaPredicted RBP6.77□□□□□ -1.33
TRERF1-201ENST00000340840 UQCRQO14949 82 aa6.77□□□□□ -1.33
TRERF1-201ENST00000340840 LECT2O14960 151 aa6.77□□□□□ -1.33
TRERF1-201ENST00000340840 DEFB130BP0DP73 79 aa6.77□□□□□ -1.33
TRERF1-201ENST00000340840 DEFB130AP0DP74 79 aa6.77□□□□□ -1.33
TRERF1-201ENST00000340840 HIST1H4AP62805 103 aaKnown RBP6.76□□□□□ -1.33
TRERF1-201ENST00000340840 ODF3L2Q3SX64 289 aa6.76□□□□□ -1.33
TRERF1-201ENST00000340840 ORMDL1Q9P0S3 153 aa6.76□□□□□ -1.33
TRERF1-201ENST00000340840 A8MTW9 85 aa6.76□□□□□ -1.33
TRERF1-201ENST00000340840 RELNP78509 3460 aa6.76□□□□□ -1.33
TRERF1-201ENST00000340840 SHISA2Q6UWI4 295 aa6.76□□□□□ -1.33
TRERF1-201ENST00000340840 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
TRERF1-201ENST00000340840 IBA57-AS1B1ANH7 110 aa6.75□□□□□ -1.33
TRERF1-201ENST00000340840 RPL28P46779 137 aaKnown RBP6.75□□□□□ -1.33
TRERF1-201ENST00000340840 C1orf158Q8N1D5 194 aa6.75□□□□□ -1.33
TRERF1-201ENST00000340840 C14orf132Q9NPU4 83 aa6.75□□□□□ -1.33
TRERF1-201ENST00000340840 TRBV6-4A0A1B0GX49 114 aa6.75□□□□□ -1.33
TRERF1-201ENST00000340840 CXCL5P42830 114 aa6.75□□□□□ -1.33
TRERF1-201ENST00000340840 Q8N2B8 174 aa6.75□□□□□ -1.33
TRERF1-201ENST00000340840 IGKV3D-7A0A0C4DH55 119 aa6.74□□□□□ -1.33
TRERF1-201ENST00000340840 XCL1P47992 114 aa6.74□□□□□ -1.33
TRERF1-201ENST00000340840 DNAJC9-AS1A6NH13 148 aa6.74□□□□□ -1.33
TRERF1-201ENST00000340840 SOSTDC1Q6X4U4 206 aa6.74□□□□□ -1.33
TRERF1-201ENST00000340840 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.74□□□□□ -1.33
TRERF1-201ENST00000340840 SMIM11BQ8TCY0 68 aa6.73□□□□□ -1.33
TRERF1-201ENST00000340840 MRAPQ8TCY5 172 aa6.73□□□□□ -1.33
TRERF1-201ENST00000340840 A0A1B0GX51 115 aa6.73□□□□□ -1.33
TRERF1-201ENST00000340840 FAM104AQ969W3 186 aa6.73□□□□□ -1.33
TRERF1-201ENST00000340840 COL6A5A8TX70 2615 aa6.73□□□□□ -1.33
TRERF1-201ENST00000340840 TRBV6-8A0A0A6YYG3 113 aa6.72□□□□□ -1.33
TRERF1-201ENST00000340840 NTM-AS1Q6ZSK4 140 aa6.72□□□□□ -1.33
TRERF1-201ENST00000340840 ZFHX4Q86UP3 3567 aa6.72□□□□□ -1.33
TRERF1-201ENST00000340840 CCL18P55774 89 aa6.72□□□□□ -1.33
TRERF1-201ENST00000340840 UBR5O95071 2799 aaPredicted RBP6.71□□□□□ -1.33
TRERF1-201ENST00000340840 SDIM1Q6ZPB5 146 aa6.71□□□□□ -1.33
TRERF1-201ENST00000340840 UBL5Q9BZL1 73 aa6.71□□□□□ -1.33
TRERF1-201ENST00000340840 LOC100131303A0A0U1RQF7 123 aa6.71□□□□□ -1.34
TRERF1-201ENST00000340840 JMJD7-PLA2G4BH0Y9G9 81 aa6.71□□□□□ -1.34
TRERF1-201ENST00000340840 CLPSL2Q6UWE3 100 aa6.71□□□□□ -1.34
TRERF1-201ENST00000340840 GYPEP15421 78 aa6.71□□□□□ -1.34
TRERF1-201ENST00000340840 FAM110AQ9BQ89 295 aa6.7□□□□□ -1.34
TRERF1-201ENST00000340840 ITPR2Q14571 2701 aa6.7□□□□□ -1.34
TRERF1-201ENST00000340840 COX7CP15954 63 aa6.7□□□□□ -1.34
TRERF1-201ENST00000340840 LINC00337Q8N6G1 96 aa6.7□□□□□ -1.34
TRERF1-201ENST00000340840 F5H768 121 aa6.7□□□□□ -1.34
TRERF1-201ENST00000340840 LAMTOR3Q9UHA4 124 aa6.7□□□□□ -1.34
TRERF1-201ENST00000340840 J3KT08 172 aa6.69□□□□□ -1.34
TRERF1-201ENST00000340840 FAM19A3Q7Z5A8 133 aa6.69□□□□□ -1.34
TRERF1-201ENST00000340840 LINC00526Q96FQ7 95 aa6.69□□□□□ -1.34
TRERF1-201ENST00000340840 FAM218AQ96MZ4 157 aa6.69□□□□□ -1.34
TRERF1-201ENST00000340840 CRYBG3Q68DQ2 2970 aa6.69□□□□□ -1.34
TRERF1-201ENST00000340840 NCR3O14931 201 aa6.69□□□□□ -1.34
TRERF1-201ENST00000340840 UTP20O75691 2785 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms