RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 FBN3Q75N90 2809 aa10.02□□□□□ -0.8
CDK5RAP3-201ENST00000338399 TMEM223A0PJW6 202 aa10.02□□□□□ -0.8
CDK5RAP3-201ENST00000338399 HERVK_113P61574 105 aa10.02□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGLV5-45A0A087WSX0 123 aa10.02□□□□□ -0.81
CDK5RAP3-201ENST00000338399 TP73-AS1Q9UF72 201 aa10.02□□□□□ -0.81
CDK5RAP3-201ENST00000338399 KLK5Q9Y337 293 aaPredicted RBP10.02□□□□□ -0.81
CDK5RAP3-201ENST00000338399 IGHV3-64A0A075B6Q5 118 aa10.01□□□□□ -0.81
CDK5RAP3-201ENST00000338399 E9PLD3 99 aa10.01□□□□□ -0.81
CDK5RAP3-201ENST00000338399 SS18Q15532 418 aa10.01□□□□□ -0.81
CDK5RAP3-201ENST00000338399 PCP2Q8IVA1 136 aa10.01□□□□□ -0.81
CDK5RAP3-201ENST00000338399 COX8AP10176 69 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 LINC01556Q5JQF7 62 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 TTTY13Q9BZ97 58 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 CSMD3Q7Z407 3707 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 CCL25O15444 150 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 SPINK8P0C7L1 97 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 PCP4P48539 62 aa10□□□□□ -0.81
CDK5RAP3-201ENST00000338399 IGLV10-54A0A075B6I4 117 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 TRAV8-3A0A0A6YYJ7 113 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 H3BRM9 83 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 SIVA1O15304 175 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 XCL1P47992 114 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 ZFAND6Q6FIF0 208 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 SLC25A34Q6PIV7 304 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 PRR34Q9NV39 138 aa9.99□□□□□ -0.81
CDK5RAP3-201ENST00000338399 DNAH10OSP0CZ25 163 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 UBE2WQ96B02 151 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 COX11Q9Y6N1 276 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 CRPP02741 224 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 C21orf62-AS1Q17RA5 79 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 UPK3BQ9BT76 320 aa9.98□□□□□ -0.81
CDK5RAP3-201ENST00000338399 IGHV3OR16-9A0A0B4J2B5 98 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 IGHV1-58A0A0C4DH39 117 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 K7EP13 123 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 LEPROTO15243 131 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 UBE2V1Q13404 147 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 BOD1L2Q8IYS8 172 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 MAPKAPK5-AS1Q8N8E1 139 aa9.97□□□□□ -0.81
CDK5RAP3-201ENST00000338399 PTTG1IPP53801 180 aa9.96□□□□□ -0.81
CDK5RAP3-201ENST00000338399 TSPEAR-AS2P59090 65 aa9.96□□□□□ -0.81
CDK5RAP3-201ENST00000338399 C5orf38Q86SI9 138 aa9.96□□□□□ -0.81
CDK5RAP3-201ENST00000338399 UBE2DNLQ8IWF7 75 aa9.96□□□□□ -0.81
CDK5RAP3-201ENST00000338399 STARD9Q9P2P6 4700 aa9.96□□□□□ -0.82
CDK5RAP3-201ENST00000338399 SMIM1B2RUZ4 78 aa9.96□□□□□ -0.82
CDK5RAP3-201ENST00000338399 HINT1P49773 126 aaPredicted RBP9.96□□□□□ -0.82
CDK5RAP3-201ENST00000338399 Q9H8V8 135 aa9.96□□□□□ -0.82
CDK5RAP3-201ENST00000338399 PLECQ15149 4684 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-201ENST00000338399 J3QQQ9 107 aa9.95□□□□□ -0.82
CDK5RAP3-201ENST00000338399 PLEKHB2Q96CS7 222 aa9.95□□□□□ -0.82
CDK5RAP3-201ENST00000338399 LGALS3P17931 250 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-201ENST00000338399 CD164L2Q6UWJ8 174 aa9.94□□□□□ -0.82
CDK5RAP3-201ENST00000338399 A0A087WZ39 114 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 MIAQ16674 131 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 MUC7Q8TAX7 377 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 LYSTQ99698 3801 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 MYMXA0A1B0GTQ4 84 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 GAGE12HA6NDE8 117 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 ZNF815PA8K554 130 aa9.93□□□□□ -0.82
CDK5RAP3-201ENST00000338399 TRAV8-4A0A0B4J246 113 aa9.92□□□□□ -0.82
CDK5RAP3-201ENST00000338399 IGLV5-39A0A0G2JS06 123 aa9.92□□□□□ -0.82
CDK5RAP3-201ENST00000338399 FOXI1Q12951 378 aa9.91□□□□□ -0.82
CDK5RAP3-201ENST00000338399 C2orf91Q6ZV80 131 aa9.91□□□□□ -0.82
CDK5RAP3-201ENST00000338399 WWC2-AS2Q96NR7 200 aa9.91□□□□□ -0.82
CDK5RAP3-201ENST00000338399 COX7A2LO14548 114 aa9.91□□□□□ -0.82
CDK5RAP3-201ENST00000338399 Q6ZVH6 145 aa9.91□□□□□ -0.82
CDK5RAP3-201ENST00000338399 Q9HAA7 133 aa9.9□□□□□ -0.82
CDK5RAP3-201ENST00000338399 TGP01266 2768 aa9.9□□□□□ -0.82
CDK5RAP3-201ENST00000338399 IBA57-AS1B1ANH7 110 aa9.89□□□□□ -0.83
CDK5RAP3-201ENST00000338399 MALP21145 153 aa9.89□□□□□ -0.83
CDK5RAP3-201ENST00000338399 C10orf126Q8N4M7 172 aa9.89□□□□□ -0.83
CDK5RAP3-201ENST00000338399 TOMM7Q9P0U1 55 aa9.89□□□□□ -0.83
CDK5RAP3-201ENST00000338399 NDUFA12Q9UI09 145 aa9.89□□□□□ -0.83
CDK5RAP3-201ENST00000338399 IGKV2D-24A0A075B6R9 120 aa9.88□□□□□ -0.83
CDK5RAP3-201ENST00000338399 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
CDK5RAP3-201ENST00000338399 COX7B2Q8TF08 81 aa9.88□□□□□ -0.83
CDK5RAP3-201ENST00000338399 C1orf43Q9BWL3 253 aa9.88□□□□□ -0.83
CDK5RAP3-201ENST00000338399 KRTAP26-1Q6PEX3 210 aa9.87□□□□□ -0.83
CDK5RAP3-201ENST00000338399 SCGB1D4Q6XE38 83 aa9.87□□□□□ -0.83
CDK5RAP3-201ENST00000338399 TAX1BP3O14907 124 aa9.86□□□□□ -0.83
CDK5RAP3-201ENST00000338399 HIGD1BQ9P298 99 aa9.86□□□□□ -0.83
CDK5RAP3-201ENST00000338399 DNAH1Q9P2D7 4330 aa9.86□□□□□ -0.83
CDK5RAP3-201ENST00000338399 TENM2Q9NT68 2774 aa9.85□□□□□ -0.83
CDK5RAP3-201ENST00000338399 BVES-AS1Q5T3Y7 98 aa9.85□□□□□ -0.83
CDK5RAP3-201ENST00000338399 KRTAP1-5Q9BYS1 174 aa9.85□□□□□ -0.83
CDK5RAP3-201ENST00000338399 NDUFA1O15239 70 aa9.85□□□□□ -0.83
CDK5RAP3-201ENST00000338399 A0A0J9YXY3 114 aa9.84□□□□□ -0.83
CDK5RAP3-201ENST00000338399 VAMP3Q15836 100 aa9.84□□□□□ -0.83
CDK5RAP3-201ENST00000338399 APOMO95445 188 aa9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 PRSS2P07478 247 aa9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 C6orf226Q5I0X4 101 aa9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 Q8IZM0 81 aa9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 CASC10Q5T4H9 136 aa9.83□□□□□ -0.84
CDK5RAP3-201ENST00000338399 VPS13DQ5THJ4 4388 aa9.82□□□□□ -0.84
CDK5RAP3-201ENST00000338399 KIAA0087Q14695 138 aa9.82□□□□□ -0.84
CDK5RAP3-201ENST00000338399 RMI2Q96E14 147 aa9.82□□□□□ -0.84
CDK5RAP3-201ENST00000338399 CFAP161Q6P656 301 aa9.81□□□□□ -0.84
CDK5RAP3-201ENST00000338399 NBDYA0A0U1RRE5 68 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms