RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 Q6ZN92 141 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 PRADC1Q9BSG0 188 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 NOP10Q9NPE3 64 aaKnown RBP3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 HECTD4Q9Y4D8 3996 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 C12orf74Q32Q52 190 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 HIST2H2BDQ6DRA6 164 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 OR13C6PQ8NH95 151 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 PRSS1P07477 247 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 PRSS2P07478 247 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 PSMB2P49721 201 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 Q6ZUT4 128 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 PCP2Q8IVA1 136 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 CHAC1Q9BUX1 264 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 IFITM1P13164 125 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 C10orf126Q8N4M7 172 aa3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 GEMIN7Q9H840 131 aaKnown RBP3.67□□□□□ -1.82
PRPF4B-201ENST00000337659 PRM2P04554 102 aa3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 GCSHP23434 173 aa3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 FAM74A4Q5TZK3 123 aa3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 TMEM243Q9BU79 118 aa3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 CELA1Q9UNI1 258 aa3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 A0A096LPF7 62 aa3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 C9orf118A6NHY6 69 aa3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 KIAA0087Q14695 138 aa3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 NEGR1Q7Z3B1 354 aa3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 TOMM7Q9P0U1 55 aa3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 SCGB1A1P11684 91 aa3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 KLK5Q9Y337 293 aaPredicted RBP3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 KMT2CQ8NEZ4 4911 aaKnown RBP3.66□□□□□ -1.82
PRPF4B-201ENST00000337659 TRGV1A0A0A0MS02 117 aa3.65□□□□□ -1.82
PRPF4B-201ENST00000337659 SPART-AS1P0CW21 52 aa3.65□□□□□ -1.82
PRPF4B-201ENST00000337659 FAM222AQ5U5X8 452 aa3.65□□□□□ -1.82
PRPF4B-201ENST00000337659 Q8IZM0 81 aa3.65□□□□□ -1.82
PRPF4B-201ENST00000337659 J3QQQ9 107 aa3.65□□□□□ -1.83
PRPF4B-201ENST00000337659 DNAH10OSP0CZ25 163 aa3.65□□□□□ -1.83
PRPF4B-201ENST00000337659 HERVK_113P61574 105 aa3.65□□□□□ -1.83
PRPF4B-201ENST00000337659 COX17Q14061 63 aa3.65□□□□□ -1.83
PRPF4B-201ENST00000337659 IGHV3-30-3P0DP02 117 aa3.65□□□□□ -1.83
PRPF4B-201ENST00000337659 FOXI1Q12951 378 aa3.65□□□□□ -1.83
PRPF4B-201ENST00000337659 TMEM101Q96IK0 257 aa3.65□□□□□ -1.83
PRPF4B-201ENST00000337659 TENM1Q9UKZ4 2725 aa3.65□□□□□ -1.83
PRPF4B-201ENST00000337659 NOTCH1P46531 2555 aa3.65□□□□□ -1.83
PRPF4B-201ENST00000337659 A0A0J9YWU9 116 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 CRPP02741 224 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 ATP5G1P05496 136 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 TCTAP57738 103 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 COX6A2Q02221 97 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 MIAQ16674 131 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 MEIG1Q5JSS6 88 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 K7EIL1 84 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 SRSF9Q13242 221 aaKnown RBP eCLIP3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 PRO0461Q9UI25 63 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 FAT2Q9NYQ8 4349 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 LINC01556Q5JQF7 62 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 OR11H2Q8NH07 326 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 COL6A5A8TX70 2615 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 LINC00959A0A1B0GUT2 108 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 GTF2H5Q6ZYL4 71 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 ATP6V0E2Q8NHE4 81 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 LINC00167Q96N53 147 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 VCX2Q9H322 139 aa3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 PLECQ15149 4684 aaKnown RBP3.64□□□□□ -1.83
PRPF4B-201ENST00000337659 VWFP04275 2813 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 C2orf82Q6UX34 121 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 C15orf53Q8NAA6 179 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 IGHV3-64A0A075B6Q5 118 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 H7C2G1 150 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 NDUFC2O95298 119 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 TLX1NBP0CAT3 122 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 NHLRC4P0CG21 123 aaPredicted RBP3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 CXCL5P42830 114 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 RPL24P83731 157 aaKnown RBP3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 MRPL23Q16540 153 aaKnown RBP3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 PLA2G2DQ9UNK4 145 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 PKD1P98161 4303 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 TRAV8-4A0A0B4J246 113 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 CDK2AP2O75956 126 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 LYPD5Q6UWN5 251 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 B9D2Q9BPU9 175 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 SPATA25Q9BR10 227 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 DNAH11Q96DT5 4516 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 STARD9Q9P2P6 4700 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 STAB1Q9NY15 2570 aa3.63□□□□□ -1.83
PRPF4B-201ENST00000337659 A0A0J9YXV3 536 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 A6NDN8 102 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 J3QR89 54 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 RPL35AP18077 110 aaKnown RBP3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 C4orf48Q5BLP8 95 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 GAGE12BA1L429 117 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 ZNF561-AS1K7EIQ3 104 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 GAGE7O76087 117 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 GAGE12FP0CL80 117 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 GAGE12GP0CL81 117 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 GAGE12IP0CL82 117 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 CD164L2Q6UWJ8 174 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 ICOSQ9Y6W8 199 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 MAP1AP78559 2803 aaPredicted RBP3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 IGLV4-60A0A075B6I1 120 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 IGLV5-37A0A075B6J1 123 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 TRBV30A0A0K0K1B3 111 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms