RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 SCGB1D4Q6XE38 83 aa16.08■□□□□ 0.16
TSEN54-201ENST00000333213 PRO0461Q9UI25 63 aa16.07■□□□□ 0.16
TSEN54-201ENST00000333213 PYGO1Q9Y3Y4 419 aa16.07■□□□□ 0.16
TSEN54-201ENST00000333213 IGLV4-3A0A075B6K6 122 aa16.06■□□□□ 0.16
TSEN54-201ENST00000333213 TRAV10A0A0B4J240 114 aa16.06■□□□□ 0.16
TSEN54-201ENST00000333213 LYRM7Q5U5X0 104 aa16.06■□□□□ 0.16
TSEN54-201ENST00000333213 TMEM243Q9BU79 118 aa16.06■□□□□ 0.16
TSEN54-201ENST00000333213 H3BMG7 143 aa16.06■□□□□ 0.16
TSEN54-201ENST00000333213 WFDC2Q14508 124 aa16.06■□□□□ 0.16
TSEN54-201ENST00000333213 NFE4Q86UQ8 179 aa16.05■□□□□ 0.16
TSEN54-201ENST00000333213 SCGB1A1P11684 91 aa16.04■□□□□ 0.16
TSEN54-201ENST00000333213 SRSF9Q13242 221 aaKnown RBP eCLIP16.04■□□□□ 0.16
TSEN54-201ENST00000333213 CSMD3Q7Z407 3707 aa16.04■□□□□ 0.16
TSEN54-201ENST00000333213 PLEKHB2Q96CS7 222 aa16.04■□□□□ 0.16
TSEN54-201ENST00000333213 PGPEP1Q9NXJ5 209 aa16.04■□□□□ 0.16
TSEN54-201ENST00000333213 RNASE13Q5GAN3 156 aaKnown RBP16.03■□□□□ 0.16
TSEN54-201ENST00000333213 SPANXA1Q9NS26 97 aa16.03■□□□□ 0.16
TSEN54-201ENST00000333213 GAGE6Q13070 117 aa16.02■□□□□ 0.15
TSEN54-201ENST00000333213 Q6ZUT4 128 aa16.02■□□□□ 0.15
TSEN54-201ENST00000333213 TIMM21Q9BVV7 248 aa16.02■□□□□ 0.15
TSEN54-201ENST00000333213 LYPD5Q6UWN5 251 aa16.01■□□□□ 0.15
TSEN54-201ENST00000333213 SH2D6Q7Z4S9 175 aa16.01■□□□□ 0.15
TSEN54-201ENST00000333213 CHCHD5Q9BSY4 110 aa16.01■□□□□ 0.15
TSEN54-201ENST00000333213 DYNC2H1Q8NCM8 4307 aaKnown RBP16.01■□□□□ 0.15
TSEN54-201ENST00000333213 DNAH7Q8WXX0 4024 aa16■□□□□ 0.15
TSEN54-201ENST00000333213 UBE2L6O14933 153 aa16■□□□□ 0.15
TSEN54-201ENST00000333213 AMELXQ99217 191 aa16■□□□□ 0.15
TSEN54-201ENST00000333213 CSDC2Q9Y534 153 aaKnown RBP16■□□□□ 0.15
TSEN54-201ENST00000333213 TMEM238C9JI98 176 aa15.99■□□□□ 0.15
TSEN54-201ENST00000333213 H7C423 109 aa15.99■□□□□ 0.15
TSEN54-201ENST00000333213 TSPAN13O95857 204 aa15.98■□□□□ 0.15
TSEN54-201ENST00000333213 IGHV3-30P01768 117 aa15.98■□□□□ 0.15
TSEN54-201ENST00000333213 IGHV3-30-5P0DP03 117 aa15.98■□□□□ 0.15
TSEN54-201ENST00000333213 ETDBQ3ZM63 59 aa15.98■□□□□ 0.15
TSEN54-201ENST00000333213 SIGMAR1Q99720 223 aa15.98■□□□□ 0.15
TSEN54-201ENST00000333213 IGLV4-60A0A075B6I1 120 aa15.97■□□□□ 0.15
TSEN54-201ENST00000333213 MRPS36P82909 103 aaKnown RBP15.97■□□□□ 0.15
TSEN54-201ENST00000333213 TMEM170BQ5T4T1 132 aa15.97■□□□□ 0.15
TSEN54-201ENST00000333213 VCX2Q9H322 139 aa15.97■□□□□ 0.15
TSEN54-201ENST00000333213 CDC42SE2Q9NRR3 84 aa15.97■□□□□ 0.15
TSEN54-201ENST00000333213 J3QQQ9 107 aa15.96■□□□□ 0.15
TSEN54-201ENST00000333213 LEPROTO15243 131 aa15.96■□□□□ 0.15
TSEN54-201ENST00000333213 LELP1Q5T871 98 aa15.96■□□□□ 0.15
TSEN54-201ENST00000333213 DGAT2L7PQ6IED9 249 aa15.96■□□□□ 0.15
TSEN54-201ENST00000333213 TRBV20-1A0A075B6N2 111 aa15.96■□□□□ 0.14
TSEN54-201ENST00000333213 GAGE12HA6NDE8 117 aa15.96■□□□□ 0.14
TSEN54-201ENST00000333213 LGALS3P17931 250 aaKnown RBP15.96■□□□□ 0.14
TSEN54-201ENST00000333213 ESRGQ1W209 222 aa15.96■□□□□ 0.14
TSEN54-201ENST00000333213 Q8N3U1 123 aa15.96■□□□□ 0.14
TSEN54-201ENST00000333213 TMEM223A0PJW6 202 aa15.95■□□□□ 0.14
TSEN54-201ENST00000333213 LYSTQ99698 3801 aa15.94■□□□□ 0.14
TSEN54-201ENST00000333213 TSPEAR-AS2P59090 65 aa15.94■□□□□ 0.14
TSEN54-201ENST00000333213 TIRAPP58753 221 aa15.94■□□□□ 0.14
TSEN54-201ENST00000333213 TMEM262E9PQX1 116 aa15.93■□□□□ 0.14
TSEN54-201ENST00000333213 C10orf126Q8N4M7 172 aa15.92■□□□□ 0.14
TSEN54-201ENST00000333213 PLECQ15149 4684 aaKnown RBP15.92■□□□□ 0.14
TSEN54-201ENST00000333213 C15orf53Q8NAA6 179 aa15.91■□□□□ 0.14
TSEN54-201ENST00000333213 STARD9Q9P2P6 4700 aa15.91■□□□□ 0.14
TSEN54-201ENST00000333213 A0A1B0GUV1 79 aa15.9■□□□□ 0.14
TSEN54-201ENST00000333213 CFC1BP0CG36 223 aa15.9■□□□□ 0.14
TSEN54-201ENST00000333213 CFC1P0CG37 223 aa15.9■□□□□ 0.14
TSEN54-201ENST00000333213 TMEM101Q96IK0 257 aa15.9■□□□□ 0.14
TSEN54-201ENST00000333213 APOMO95445 188 aa15.9■□□□□ 0.14
TSEN54-201ENST00000333213 A0A0J9YXV3 536 aa15.89■□□□□ 0.13
TSEN54-201ENST00000333213 ZNF22P17026 224 aaPredicted RBP15.89■□□□□ 0.13
TSEN54-201ENST00000333213 SMAGPQ0VAQ4 97 aa15.89■□□□□ 0.13
TSEN54-201ENST00000333213 PRO1854Q9UHT4 67 aa15.89■□□□□ 0.13
TSEN54-201ENST00000333213 FOXI1Q12951 378 aa15.88■□□□□ 0.13
TSEN54-201ENST00000333213 WFDC10BQ8IUB3 73 aa15.88■□□□□ 0.13
TSEN54-201ENST00000333213 LOC107984156A0A0G2JMH3 177 aa15.88■□□□□ 0.13
TSEN54-201ENST00000333213 SMCPP49901 116 aaPredicted RBP15.88■□□□□ 0.13
TSEN54-201ENST00000333213 ARL17AQ8IVW1 177 aa15.88■□□□□ 0.13
TSEN54-201ENST00000333213 PSMB2P49721 201 aa15.87■□□□□ 0.13
TSEN54-201ENST00000333213 A0A0B4J2C4 111 aa15.86■□□□□ 0.13
TSEN54-201ENST00000333213 M0QXV9 152 aa15.86■□□□□ 0.13
TSEN54-201ENST00000333213 TGP01266 2768 aa15.85■□□□□ 0.13
TSEN54-201ENST00000333213 TRAV13-1A0A0B4J241 112 aa15.84■□□□□ 0.13
TSEN54-201ENST00000333213 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.84■□□□□ 0.13
TSEN54-201ENST00000333213 LINC00588Q9Y4M8 146 aa15.83■□□□□ 0.12
TSEN54-201ENST00000333213 TCL1BO95988 128 aa15.82■□□□□ 0.12
TSEN54-201ENST00000333213 COX6A2Q02221 97 aa15.82■□□□□ 0.12
TSEN54-201ENST00000333213 LINC00242Q5T6M2 205 aa15.82■□□□□ 0.12
TSEN54-201ENST00000333213 TEN1Q86WV5 123 aa15.82■□□□□ 0.12
TSEN54-201ENST00000333213 MTURNQ8N3F0 131 aa15.82■□□□□ 0.12
TSEN54-201ENST00000333213 PPDPFLQ8WWR9 84 aa15.82■□□□□ 0.12
TSEN54-201ENST00000333213 IGKV3OR2-268A0A0C4DH90 116 aa15.82■□□□□ 0.12
TSEN54-201ENST00000333213 APLNQ9ULZ1 77 aa15.81■□□□□ 0.12
TSEN54-201ENST00000333213 TINCRA0A1B0GVN0 87 aa15.8■□□□□ 0.12
TSEN54-201ENST00000333213 CLPSL2Q6UWE3 100 aa15.8■□□□□ 0.12
TSEN54-201ENST00000333213 FAM19A3Q7Z5A8 133 aa15.8■□□□□ 0.12
TSEN54-201ENST00000333213 LINC00269Q8N2A0 174 aa15.8■□□□□ 0.12
TSEN54-201ENST00000333213 A4D1N5 150 aa15.8■□□□□ 0.12
TSEN54-201ENST00000333213 IGHV3-33P01772 117 aa15.8■□□□□ 0.12
TSEN54-201ENST00000333213 ANGP03950 147 aaKnown RBP15.8■□□□□ 0.12
TSEN54-201ENST00000333213 TENM2Q9NT68 2774 aa15.79■□□□□ 0.12
TSEN54-201ENST00000333213 DNAH1Q9P2D7 4330 aa15.79■□□□□ 0.12
TSEN54-201ENST00000333213 IGHV3-30-3P0DP02 117 aa15.79■□□□□ 0.12
TSEN54-201ENST00000333213 LINC01600Q96MT4 127 aa15.78■□□□□ 0.12
TSEN54-201ENST00000333213 A0A0J9YXY3 114 aa15.77■□□□□ 0.12
TSEN54-201ENST00000333213 LINC00959A0A1B0GUT2 108 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms