RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 RS1O15537 224 aa13.59□□□□□ -0.23
LAMP1-201ENST00000332556 TRRAPQ9Y4A5 3859 aa13.59□□□□□ -0.23
LAMP1-201ENST00000332556 TMEM86BQ8N661 226 aa13.58□□□□□ -0.23
LAMP1-201ENST00000332556 DGAT2L7PQ6IED9 249 aa13.58□□□□□ -0.24
LAMP1-201ENST00000332556 SPATA3Q8NHX4 192 aa13.58□□□□□ -0.24
LAMP1-201ENST00000332556 TMEM101Q96IK0 257 aa13.58□□□□□ -0.24
LAMP1-201ENST00000332556 SPANXA1Q9NS26 97 aa13.58□□□□□ -0.24
LAMP1-201ENST00000332556 BEAN1Q3B7T3 259 aa13.57□□□□□ -0.24
LAMP1-201ENST00000332556 SVIPQ8NHG7 77 aa13.57□□□□□ -0.24
LAMP1-201ENST00000332556 TRAV13-1A0A0B4J241 112 aa13.57□□□□□ -0.24
LAMP1-201ENST00000332556 H3BT86 120 aa13.57□□□□□ -0.24
LAMP1-201ENST00000332556 NTM-AS1Q6ZSK4 140 aa13.57□□□□□ -0.24
LAMP1-201ENST00000332556 IGKV3OR2-268A0A0C4DH90 116 aa13.57□□□□□ -0.24
LAMP1-201ENST00000332556 LINC01600Q96MT4 127 aa13.57□□□□□ -0.24
LAMP1-201ENST00000332556 Q9H8V8 135 aa13.56□□□□□ -0.24
LAMP1-201ENST00000332556 KMT2BQ9UMN6 2715 aaPredicted RBP13.56□□□□□ -0.24
LAMP1-201ENST00000332556 EDA2RQ9HAV5 297 aa13.55□□□□□ -0.24
LAMP1-201ENST00000332556 KRTAP10-3P60369 221 aa13.55□□□□□ -0.24
LAMP1-201ENST00000332556 TRGV2A0A075B6R0 118 aa13.54□□□□□ -0.24
LAMP1-201ENST00000332556 ATRQ13535 2644 aa13.53□□□□□ -0.24
LAMP1-201ENST00000332556 C3orf56Q8N813 242 aa13.53□□□□□ -0.24
LAMP1-201ENST00000332556 LINC00308Q8TCZ7 52 aa13.53□□□□□ -0.24
LAMP1-201ENST00000332556 CHCHD5Q9BSY4 110 aa13.53□□□□□ -0.24
LAMP1-201ENST00000332556 NDUFA1O15239 70 aa13.52□□□□□ -0.24
LAMP1-201ENST00000332556 Q6Q795 121 aa13.52□□□□□ -0.24
LAMP1-201ENST00000332556 K7EQD1 137 aa13.51□□□□□ -0.25
LAMP1-201ENST00000332556 RNASE1P07998 156 aaKnown RBP13.51□□□□□ -0.25
LAMP1-201ENST00000332556 SOSTDC1Q6X4U4 206 aa13.51□□□□□ -0.25
LAMP1-201ENST00000332556 PLAC8L1A1L4L8 177 aa13.51□□□□□ -0.25
LAMP1-201ENST00000332556 J3QKU1 62 aa13.51□□□□□ -0.25
LAMP1-201ENST00000332556 C19orf73Q9NVV2 129 aa13.51□□□□□ -0.25
LAMP1-201ENST00000332556 TRAV25A0A0B4J276 109 aa13.5□□□□□ -0.25
LAMP1-201ENST00000332556 IL17DQ8TAD2 202 aa13.5□□□□□ -0.25
LAMP1-201ENST00000332556 CIRBPQ14011 172 aaKnown RBP13.49□□□□□ -0.25
LAMP1-201ENST00000332556 LINC00242Q5T6M2 205 aa13.49□□□□□ -0.25
LAMP1-201ENST00000332556 RPL36AP83881 106 aaKnown RBP13.49□□□□□ -0.25
LAMP1-201ENST00000332556 RPL36ALQ969Q0 106 aaKnown RBP13.49□□□□□ -0.25
LAMP1-201ENST00000332556 TIMM17BO60830 172 aa13.48□□□□□ -0.25
LAMP1-201ENST00000332556 IGLV1-51P01701 117 aa13.48□□□□□ -0.25
LAMP1-201ENST00000332556 DEFB130BP0DP73 79 aa13.48□□□□□ -0.25
LAMP1-201ENST00000332556 DEFB130AP0DP74 79 aa13.48□□□□□ -0.25
LAMP1-201ENST00000332556 MEIG1Q5JSS6 88 aa13.47□□□□□ -0.25
LAMP1-201ENST00000332556 TIRAPP58753 221 aa13.47□□□□□ -0.25
LAMP1-201ENST00000332556 DNAJC30Q96LL9 226 aa13.47□□□□□ -0.25
LAMP1-201ENST00000332556 IGLV5-45A0A087WSX0 123 aa13.47□□□□□ -0.25
LAMP1-201ENST00000332556 DEFB121Q5J5C9 76 aa13.46□□□□□ -0.25
LAMP1-201ENST00000332556 PRIMA1Q86XR5 153 aa13.46□□□□□ -0.25
LAMP1-201ENST00000332556 PIK3CD-AS1Q5SR53 167 aa13.46□□□□□ -0.26
LAMP1-201ENST00000332556 NSD1Q96L73 2696 aaPredicted RBP13.45□□□□□ -0.26
LAMP1-201ENST00000332556 A0A096LPF7 62 aa13.45□□□□□ -0.26
LAMP1-201ENST00000332556 SMIM1B2RUZ4 78 aa13.45□□□□□ -0.26
LAMP1-201ENST00000332556 DEFB4AO15263 64 aa13.45□□□□□ -0.26
LAMP1-201ENST00000332556 LINC00482Q8N8I6 264 aa13.45□□□□□ -0.26
LAMP1-201ENST00000332556 TRGV4A0A0C4DH28 118 aa13.44□□□□□ -0.26
LAMP1-201ENST00000332556 IGLV5-39A0A0G2JS06 123 aa13.44□□□□□ -0.26
LAMP1-201ENST00000332556 FAM240AA0A1B0GVK7 77 aa13.44□□□□□ -0.26
LAMP1-201ENST00000332556 COX7A2LO14548 114 aa13.44□□□□□ -0.26
LAMP1-201ENST00000332556 SMIM20Q8N5G0 67 aa13.44□□□□□ -0.26
LAMP1-201ENST00000332556 SMCR5Q8TEV8 140 aa13.44□□□□□ -0.26
LAMP1-201ENST00000332556 HIVEP1P15822 2718 aa13.44□□□□□ -0.26
LAMP1-201ENST00000332556 HILS1P60008 231 aa13.44□□□□□ -0.26
LAMP1-201ENST00000332556 HERVK_113P63121 156 aa13.44□□□□□ -0.26
LAMP1-201ENST00000332556 CSNK1G2-AS1Q8NCQ2 148 aa13.44□□□□□ -0.26
LAMP1-201ENST00000332556 PF4P02776 101 aa13.43□□□□□ -0.26
LAMP1-201ENST00000332556 DAZ2Q13117 558 aaKnown RBP13.43□□□□□ -0.26
LAMP1-201ENST00000332556 DAZ4Q86SG3 579 aaKnown RBP13.43□□□□□ -0.26
LAMP1-201ENST00000332556 FAM218AQ96MZ4 157 aa13.43□□□□□ -0.26
LAMP1-201ENST00000332556 C16orf95Q9H693 158 aa13.43□□□□□ -0.26
LAMP1-201ENST00000332556 DAZ3Q9NR90 486 aaKnown RBP13.43□□□□□ -0.26
LAMP1-201ENST00000332556 FAM236AA0A1B0GUQ0 79 aa13.42□□□□□ -0.26
LAMP1-201ENST00000332556 FAM236BA0A1B0GV22 79 aa13.42□□□□□ -0.26
LAMP1-201ENST00000332556 LY6G6DO95868 133 aa13.42□□□□□ -0.26
LAMP1-201ENST00000332556 MRPL23Q16540 153 aaKnown RBP13.41□□□□□ -0.26
LAMP1-201ENST00000332556 UBE2L6O14933 153 aa13.4□□□□□ -0.26
LAMP1-201ENST00000332556 Q9HAA7 133 aa13.4□□□□□ -0.26
LAMP1-201ENST00000332556 INAFM1C9JVW0 142 aa13.4□□□□□ -0.26
LAMP1-201ENST00000332556 SHISA2Q6UWI4 295 aa13.4□□□□□ -0.26
LAMP1-201ENST00000332556 CDC42SE2Q9NRR3 84 aa13.4□□□□□ -0.26
LAMP1-201ENST00000332556 IGLV4-60A0A075B6I1 120 aa13.39□□□□□ -0.27
LAMP1-201ENST00000332556 C16orf74Q96GX8 76 aa13.39□□□□□ -0.27
LAMP1-201ENST00000332556 TRBV7-7A0A0K0K1E9 115 aa13.39□□□□□ -0.27
LAMP1-201ENST00000332556 BAALC-AS2P0C853 105 aa13.39□□□□□ -0.27
LAMP1-201ENST00000332556 TOMM7Q9P0U1 55 aa13.38□□□□□ -0.27
LAMP1-201ENST00000332556 CLPSL2Q6UWE3 100 aa13.37□□□□□ -0.27
LAMP1-201ENST00000332556 C22orf24Q9Y442 160 aa13.37□□□□□ -0.27
LAMP1-201ENST00000332556 TMEM243Q9BU79 118 aa13.36□□□□□ -0.27
LAMP1-201ENST00000332556 TEP1Q99973 2627 aaKnown RBP13.36□□□□□ -0.27
LAMP1-201ENST00000332556 F5H768 121 aa13.36□□□□□ -0.27
LAMP1-201ENST00000332556 FHL2Q14192 279 aa13.36□□□□□ -0.27
LAMP1-201ENST00000332556 C11orf68Q9H3H3 251 aaKnown RBP13.36□□□□□ -0.27
LAMP1-201ENST00000332556 TRBV10-1A0A0K0K1A3 114 aa13.35□□□□□ -0.27
LAMP1-201ENST00000332556 HERV-K104P63124 156 aa13.34□□□□□ -0.27
LAMP1-201ENST00000332556 GAGE2AQ6NT46 116 aa13.33□□□□□ -0.28
LAMP1-201ENST00000332556 C5orf38Q86SI9 138 aa13.32□□□□□ -0.28
LAMP1-201ENST00000332556 TRACP01848 142 aa13.31□□□□□ -0.28
LAMP1-201ENST00000332556 ACYP1P07311 99 aa13.31□□□□□ -0.28
LAMP1-201ENST00000332556 MIR7-3HGQ8N6C7 128 aa13.31□□□□□ -0.28
LAMP1-201ENST00000332556 LINC00337Q8N6G1 96 aa13.31□□□□□ -0.28
LAMP1-201ENST00000332556 DEFB135Q30KP9 77 aa13.3□□□□□ -0.28
LAMP1-201ENST00000332556 Q8N3U1 123 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms