RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 MAPKAPK5-AS1Q8N8E1 139 aa7.81□□□□□ -1.16
CLN8-201ENST00000331222 ESRGQ1W209 222 aa7.81□□□□□ -1.16
CLN8-201ENST00000331222 LINC00308Q8TCZ7 52 aa7.81□□□□□ -1.16
CLN8-201ENST00000331222 PLA2G2AP14555 144 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 C19orf71A6NCJ1 209 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 SPANXB1Q9NS25 103 aaPredicted RBP7.8□□□□□ -1.16
CLN8-201ENST00000331222 IGF2RP11717 2491 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 ODF3BA8MYP8 253 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 CRIP1P50238 77 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 COA6Q5JTJ3 125 aaKnown RBP7.8□□□□□ -1.16
CLN8-201ENST00000331222 LINC01006Q8NI28 216 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 H3BT86 120 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 ZNF702PQ9H963 129 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 MYO9AB2RTY4 2548 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 PRYO14603 147 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 RBX1P62877 108 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 HIGD1BQ9P298 99 aa7.8□□□□□ -1.16
CLN8-201ENST00000331222 PRR3P79522 188 aaKnown RBP7.79□□□□□ -1.16
CLN8-201ENST00000331222 C10orf25Q5T742 122 aa7.79□□□□□ -1.16
CLN8-201ENST00000331222 NCOR2Q9Y618 2525 aa7.79□□□□□ -1.16
CLN8-201ENST00000331222 LINC01556Q5JQF7 62 aa7.79□□□□□ -1.16
CLN8-201ENST00000331222 SMIM11BQ8TCY0 68 aa7.79□□□□□ -1.16
CLN8-201ENST00000331222 LOC107984640A0A0U1RRK4 108 aa7.79□□□□□ -1.16
CLN8-201ENST00000331222 Q6ZQY7 126 aa7.79□□□□□ -1.16
CLN8-201ENST00000331222 PDE6GP18545 87 aa7.79□□□□□ -1.16
CLN8-201ENST00000331222 IGHV6-1A0A0B4J1U7 121 aa7.78□□□□□ -1.16
CLN8-201ENST00000331222 M0QXV9 152 aa7.78□□□□□ -1.16
CLN8-201ENST00000331222 CRIP2P52943 208 aaPredicted RBP7.78□□□□□ -1.16
CLN8-201ENST00000331222 LINC00643Q86TS7 51 aa7.78□□□□□ -1.16
CLN8-201ENST00000331222 IGLV4-69A0A075B6H9 119 aa7.78□□□□□ -1.16
CLN8-201ENST00000331222 M0QY20 66 aa7.78□□□□□ -1.16
CLN8-201ENST00000331222 ZNF22P17026 224 aaPredicted RBP7.78□□□□□ -1.16
CLN8-201ENST00000331222 LRRC75A-AS1Q8N1F1 130 aa7.78□□□□□ -1.16
CLN8-201ENST00000331222 FN1P02751 2386 aaKnown RBP7.78□□□□□ -1.16
CLN8-201ENST00000331222 SERP2Q8N6R1 65 aa7.78□□□□□ -1.16
CLN8-201ENST00000331222 ZNF706Q9Y5V0 76 aaPredicted RBP7.78□□□□□ -1.16
CLN8-201ENST00000331222 Q8N9L7 120 aa7.77□□□□□ -1.17
CLN8-201ENST00000331222 NDUFC2-KCTD14E9PQ53 114 aa7.77□□□□□ -1.17
CLN8-201ENST00000331222 LINC00959A0A1B0GUT2 108 aa7.76□□□□□ -1.17
CLN8-201ENST00000331222 TRBV27A0A0K0K1C4 114 aa7.76□□□□□ -1.17
CLN8-201ENST00000331222 CDSNQ15517 529 aa7.76□□□□□ -1.17
CLN8-201ENST00000331222 MRPL55Q7Z7F7 128 aaKnown RBP7.76□□□□□ -1.17
CLN8-201ENST00000331222 C6orf223Q8N319 242 aa7.76□□□□□ -1.17
CLN8-201ENST00000331222 BRCA2P51587 3418 aa7.76□□□□□ -1.17
CLN8-201ENST00000331222 IBA57-AS1B1ANH7 110 aa7.76□□□□□ -1.17
CLN8-201ENST00000331222 PLA2G1BP04054 148 aaKnown RBP7.76□□□□□ -1.17
CLN8-201ENST00000331222 C1orf137Q5JT78 98 aa7.76□□□□□ -1.17
CLN8-201ENST00000331222 Q6Q795 121 aa7.76□□□□□ -1.17
CLN8-201ENST00000331222 LAMA3Q16787 3333 aa7.76□□□□□ -1.17
CLN8-201ENST00000331222 H7C423 109 aa7.75□□□□□ -1.17
CLN8-201ENST00000331222 M0R378 163 aa7.75□□□□□ -1.17
CLN8-201ENST00000331222 FBXL19-AS1Q494R0 122 aa7.75□□□□□ -1.17
CLN8-201ENST00000331222 PRR9Q5T870 116 aa7.74□□□□□ -1.17
CLN8-201ENST00000331222 LELP1Q5T871 98 aa7.74□□□□□ -1.17
CLN8-201ENST00000331222 SBSPONQ8IVN8 264 aa7.74□□□□□ -1.17
CLN8-201ENST00000331222 MRPS12O15235 138 aaKnown RBP7.74□□□□□ -1.17
CLN8-201ENST00000331222 PCOTHQ58A44 107 aa7.74□□□□□ -1.17
CLN8-201ENST00000331222 MBD6Q96DN6 1003 aa7.74□□□□□ -1.17
CLN8-201ENST00000331222 CD164L2Q6UWJ8 174 aa7.74□□□□□ -1.17
CLN8-201ENST00000331222 FAM240AA0A1B0GVK7 77 aa7.74□□□□□ -1.17
CLN8-201ENST00000331222 KRTAP10-9P60411 292 aa7.74□□□□□ -1.17
CLN8-201ENST00000331222 TRBV6-4A0A1B0GX49 114 aa7.73□□□□□ -1.17
CLN8-201ENST00000331222 RNF185Q96GF1 192 aa7.73□□□□□ -1.17
CLN8-201ENST00000331222 JMJD1CQ15652 2540 aa7.73□□□□□ -1.17
CLN8-201ENST00000331222 CYSRT1A8MQ03 144 aa7.73□□□□□ -1.17
CLN8-201ENST00000331222 GAS8-AS1O95177 125 aa7.73□□□□□ -1.17
CLN8-201ENST00000331222 TSHBP01222 138 aa7.73□□□□□ -1.17
CLN8-201ENST00000331222 ODF3Q96PU9 254 aa7.72□□□□□ -1.17
CLN8-201ENST00000331222 Q6ZSR3 168 aa7.72□□□□□ -1.17
CLN8-201ENST00000331222 DHRS4-AS1Q9P1J3 65 aa7.72□□□□□ -1.17
CLN8-201ENST00000331222 REG3GQ6UW15 175 aa7.71□□□□□ -1.17
CLN8-201ENST00000331222 UNQ6190/PRO20217Q6UXQ8 127 aa7.71□□□□□ -1.17
CLN8-201ENST00000331222 SPRY4Q9C004 299 aa7.71□□□□□ -1.17
CLN8-201ENST00000331222 C11orf71Q6IPW1 123 aa7.71□□□□□ -1.18
CLN8-201ENST00000331222 Q6ZTC4 211 aa7.71□□□□□ -1.18
CLN8-201ENST00000331222 COX6A2Q02221 97 aa7.71□□□□□ -1.18
CLN8-201ENST00000331222 PSMG3-AS1Q96PY0 264 aa7.71□□□□□ -1.18
CLN8-201ENST00000331222 BRWD1-AS2P59051 145 aa7.71□□□□□ -1.18
CLN8-201ENST00000331222 RNASE3P12724 160 aaKnown RBP7.7□□□□□ -1.18
CLN8-201ENST00000331222 A0A1B0GXF2 115 aa7.7□□□□□ -1.18
CLN8-201ENST00000331222 SOSTDC1Q6X4U4 206 aa7.7□□□□□ -1.18
CLN8-201ENST00000331222 FAM19A3Q7Z5A8 133 aa7.7□□□□□ -1.18
CLN8-201ENST00000331222 Q6ZPA2 131 aa7.7□□□□□ -1.18
CLN8-201ENST00000331222 SPTBN4Q9H254 2564 aa7.69□□□□□ -1.18
CLN8-201ENST00000331222 TRBV7-6A0A0J9YX20 115 aa7.69□□□□□ -1.18
CLN8-201ENST00000331222 TIMM17BO60830 172 aa7.69□□□□□ -1.18
CLN8-201ENST00000331222 TLN1Q9Y490 2541 aaKnown RBP7.69□□□□□ -1.18
CLN8-201ENST00000331222 PYGO1Q9Y3Y4 419 aa7.69□□□□□ -1.18
CLN8-201ENST00000331222 UQCRQO14949 82 aa7.69□□□□□ -1.18
CLN8-201ENST00000331222 LINC00474Q9P2X8 69 aa7.69□□□□□ -1.18
CLN8-201ENST00000331222 PRUNE2Q8WUY3 3088 aa7.68□□□□□ -1.18
CLN8-201ENST00000331222 ZNF73O43830 326 aaPredicted RBP7.68□□□□□ -1.18
CLN8-201ENST00000331222 A8MTW9 85 aa7.68□□□□□ -1.18
CLN8-201ENST00000331222 RPL28P46779 137 aaKnown RBP7.68□□□□□ -1.18
CLN8-201ENST00000331222 LINC01547P58512 204 aaPredicted RBP7.68□□□□□ -1.18
CLN8-201ENST00000331222 CFAP54Q96N23 3096 aa7.68□□□□□ -1.18
CLN8-201ENST00000331222 AVPP01185 164 aa7.68□□□□□ -1.18
CLN8-201ENST00000331222 XGP55808 180 aa7.68□□□□□ -1.18
CLN8-201ENST00000331222 COL27A1Q8IZC6 1860 aaPredicted RBP7.68□□□□□ -1.18
CLN8-201ENST00000331222 FSHBP01225 129 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms