RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 IGHV3-49A0A0A0MS15 119 aa8.58□□□□□ -1.04
SHMT2-201ENST00000328923 CSMD2Q7Z408 3487 aa8.58□□□□□ -1.04
SHMT2-201ENST00000328923 C20orf203Q8NBC4 194 aa8.57□□□□□ -1.04
SHMT2-201ENST00000328923 ZNF625Q96I27 306 aaPredicted RBP8.57□□□□□ -1.04
SHMT2-201ENST00000328923 OBSCN-AS1Q96MR7 158 aa8.57□□□□□ -1.04
SHMT2-201ENST00000328923 MOB4Q9Y3A3 225 aa8.57□□□□□ -1.04
SHMT2-201ENST00000328923 ITPR2Q14571 2701 aa8.57□□□□□ -1.04
SHMT2-201ENST00000328923 A0A087WYN8 130 aa8.57□□□□□ -1.04
SHMT2-201ENST00000328923 S100A7L2Q5SY68 101 aa8.57□□□□□ -1.04
SHMT2-201ENST00000328923 CLEC19AQ6UXS0 136 aa8.57□□□□□ -1.04
SHMT2-201ENST00000328923 CRYBG3Q68DQ2 2970 aa8.57□□□□□ -1.04
SHMT2-201ENST00000328923 TRAV7A0A075B6U4 112 aa8.56□□□□□ -1.04
SHMT2-201ENST00000328923 LY6HO94772 140 aa8.56□□□□□ -1.04
SHMT2-201ENST00000328923 CD28P10747 220 aa8.56□□□□□ -1.04
SHMT2-201ENST00000328923 SAA4P35542 130 aa8.56□□□□□ -1.04
SHMT2-201ENST00000328923 C11orf71Q6IPW1 123 aa8.56□□□□□ -1.04
SHMT2-201ENST00000328923 CD164Q04900 197 aa8.56□□□□□ -1.04
SHMT2-201ENST00000328923 FAM74A4Q5TZK3 123 aa8.56□□□□□ -1.04
SHMT2-201ENST00000328923 FAM104AQ969W3 186 aa8.56□□□□□ -1.04
SHMT2-201ENST00000328923 CREBBPQ92793 2442 aa8.55□□□□□ -1.04
SHMT2-201ENST00000328923 ZNF561-AS1K7EIQ3 104 aa8.55□□□□□ -1.04
SHMT2-201ENST00000328923 DEFB1P60022 68 aa8.55□□□□□ -1.04
SHMT2-201ENST00000328923 SOCS3O14543 225 aa8.55□□□□□ -1.04
SHMT2-201ENST00000328923 PAX4O43316 350 aa8.55□□□□□ -1.04
SHMT2-201ENST00000328923 GNLYP22749 145 aa8.55□□□□□ -1.04
SHMT2-201ENST00000328923 ECSCRQ19T08 205 aa8.55□□□□□ -1.04
SHMT2-201ENST00000328923 ATP6V0E1O15342 81 aa8.54□□□□□ -1.04
SHMT2-201ENST00000328923 RNASE4P34096 147 aaKnown RBP8.54□□□□□ -1.04
SHMT2-201ENST00000328923 CFHR3Q02985 330 aa8.54□□□□□ -1.04
SHMT2-201ENST00000328923 PRR15Q8IV56 129 aa8.54□□□□□ -1.04
SHMT2-201ENST00000328923 CELSR2Q9HCU4 2923 aa8.54□□□□□ -1.04
SHMT2-201ENST00000328923 A0A1W2PPR1 153 aa8.53□□□□□ -1.04
SHMT2-201ENST00000328923 HIST2H2BCQ6DN03 193 aa8.53□□□□□ -1.04
SHMT2-201ENST00000328923 BLCAPP62952 87 aa8.53□□□□□ -1.04
SHMT2-201ENST00000328923 Q6ZRU5 148 aa8.53□□□□□ -1.04
SHMT2-201ENST00000328923 NDUFA1O15239 70 aa8.52□□□□□ -1.04
SHMT2-201ENST00000328923 PIK3CD-AS1Q5SR53 167 aa8.52□□□□□ -1.04
SHMT2-201ENST00000328923 DOPEY1Q5JWR5 2465 aa8.52□□□□□ -1.05
SHMT2-201ENST00000328923 ATP5EP2Q5VTU8 51 aa8.52□□□□□ -1.05
SHMT2-201ENST00000328923 C1orf158Q8N1D5 194 aa8.52□□□□□ -1.05
SHMT2-201ENST00000328923 PLAC8L1A1L4L8 177 aa8.51□□□□□ -1.05
SHMT2-201ENST00000328923 HIST2H2BDQ6DRA6 164 aa8.51□□□□□ -1.05
SHMT2-201ENST00000328923 TRAV13-2A0A0B4J235 113 aa8.51□□□□□ -1.05
SHMT2-201ENST00000328923 TRAV10A0A0B4J240 114 aa8.51□□□□□ -1.05
SHMT2-201ENST00000328923 KLLNB2CW77 178 aa8.51□□□□□ -1.05
SHMT2-201ENST00000328923 SLPIP03973 132 aa8.51□□□□□ -1.05
SHMT2-201ENST00000328923 Q9H8V8 135 aa8.51□□□□□ -1.05
SHMT2-201ENST00000328923 A0A087WZ39 114 aa8.5□□□□□ -1.05
SHMT2-201ENST00000328923 UNQ9165/PRO28630Q6UXU0 137 aa8.5□□□□□ -1.05
SHMT2-201ENST00000328923 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
SHMT2-201ENST00000328923 M0QY20 66 aa8.5□□□□□ -1.05
SHMT2-201ENST00000328923 C19orf84I3L1E1 186 aa8.49□□□□□ -1.05
SHMT2-201ENST00000328923 NDUFA4O00483 81 aa8.49□□□□□ -1.05
SHMT2-201ENST00000328923 CDKN2A-AS1Q9UH64 79 aa8.49□□□□□ -1.05
SHMT2-201ENST00000328923 G3V318 75 aa8.48□□□□□ -1.05
SHMT2-201ENST00000328923 C11orf72Q8NBR9 251 aa8.48□□□□□ -1.05
SHMT2-201ENST00000328923 IGKV2-29A2NJV5 120 aaPredicted RBP8.48□□□□□ -1.05
SHMT2-201ENST00000328923 LECT2O14960 151 aa8.48□□□□□ -1.05
SHMT2-201ENST00000328923 ABCA12Q86UK0 2595 aa8.48□□□□□ -1.05
SHMT2-201ENST00000328923 ATP5EP56381 51 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-201ENST00000328923 C19orf54Q5BKX5 351 aa8.47□□□□□ -1.05
SHMT2-201ENST00000328923 TEP1Q99973 2627 aaKnown RBP8.47□□□□□ -1.05
SHMT2-201ENST00000328923 IBA57-AS1B1ANH7 110 aa8.47□□□□□ -1.05
SHMT2-201ENST00000328923 F6UB75 175 aa8.46□□□□□ -1.05
SHMT2-201ENST00000328923 C4orf48Q5BLP8 95 aa8.46□□□□□ -1.05
SHMT2-201ENST00000328923 C6orf223Q8N319 242 aa8.46□□□□□ -1.05
SHMT2-201ENST00000328923 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.46□□□□□ -1.05
SHMT2-201ENST00000328923 TRBV10-3A0A0K0K1G6 114 aa8.46□□□□□ -1.06
SHMT2-201ENST00000328923 LINC00337Q8N6G1 96 aa8.46□□□□□ -1.06
SHMT2-201ENST00000328923 OVOL2Q9BRP0 275 aa8.46□□□□□ -1.06
SHMT2-201ENST00000328923 NDUFC1O43677 76 aa8.45□□□□□ -1.06
SHMT2-201ENST00000328923 SMIM11BQ8TCY0 68 aa8.45□□□□□ -1.06
SHMT2-201ENST00000328923 BCE1O60756 84 aa8.45□□□□□ -1.06
SHMT2-201ENST00000328923 CRPP02741 224 aa8.45□□□□□ -1.06
SHMT2-201ENST00000328923 C5orf56Q8N8D9 126 aa8.45□□□□□ -1.06
SHMT2-201ENST00000328923 MIFP14174 115 aa8.44□□□□□ -1.06
SHMT2-201ENST00000328923 ZFP36P26651 326 aaKnown RBP8.44□□□□□ -1.06
SHMT2-201ENST00000328923 CUBNO60494 3623 aa8.44□□□□□ -1.06
SHMT2-201ENST00000328923 DAD1P61803 113 aa8.44□□□□□ -1.06
SHMT2-201ENST00000328923 ESRGQ1W209 222 aa8.44□□□□□ -1.06
SHMT2-201ENST00000328923 TM2D3Q9BRN9 247 aa8.44□□□□□ -1.06
SHMT2-201ENST00000328923 IGHV3-16A0A0C4DH30 117 aa8.43□□□□□ -1.06
SHMT2-201ENST00000328923 UBL5Q9BZL1 73 aa8.43□□□□□ -1.06
SHMT2-201ENST00000328923 SPG11Q96JI7 2443 aa8.43□□□□□ -1.06
SHMT2-201ENST00000328923 Q6ZTI0 123 aa8.43□□□□□ -1.06
SHMT2-201ENST00000328923 MRPL55Q7Z7F7 128 aaKnown RBP8.43□□□□□ -1.06
SHMT2-201ENST00000328923 ORMDL1Q9P0S3 153 aa8.43□□□□□ -1.06
SHMT2-201ENST00000328923 COX6A2Q02221 97 aa8.42□□□□□ -1.06
SHMT2-201ENST00000328923 IGKV2-28A0A075B6P5 120 aa8.42□□□□□ -1.06
SHMT2-201ENST00000328923 TRBV7-4A0A0J9YYF1 115 aa8.42□□□□□ -1.06
SHMT2-201ENST00000328923 H3BUA1 57 aa8.42□□□□□ -1.06
SHMT2-201ENST00000328923 IGKV2D-28P01615 120 aa8.42□□□□□ -1.06
SHMT2-201ENST00000328923 RPL36AP83881 106 aaKnown RBP8.42□□□□□ -1.06
SHMT2-201ENST00000328923 RPL36ALQ969Q0 106 aaKnown RBP8.42□□□□□ -1.06
SHMT2-201ENST00000328923 USMG5Q96IX5 58 aa8.41□□□□□ -1.06
SHMT2-201ENST00000328923 APCP25054 2843 aa8.41□□□□□ -1.06
SHMT2-201ENST00000328923 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.41□□□□□ -1.06
SHMT2-201ENST00000328923 IGHV1OR15-1A0A075B7D0 117 aa8.41□□□□□ -1.06
SHMT2-201ENST00000328923 PF4P02776 101 aa8.4□□□□□ -1.07
SHMT2-201ENST00000328923 H0YGX0 51 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms