RNA–Protein interactions for RNA: ENST00000328024.10

RAB11B-201, Transcript of RAB11B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11B, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-201ENST00000328024 C1orf134Q5TEV5 83 aa13.61□□□□□ -0.23
RAB11B-201ENST00000328024 TRBV25-1A0A075B6N4 114 aa13.6□□□□□ -0.23
RAB11B-201ENST00000328024 C6orf223Q8N319 242 aa13.6□□□□□ -0.23
RAB11B-201ENST00000328024 HERVK_113P61574 105 aa13.6□□□□□ -0.23
RAB11B-201ENST00000328024 C20orf203Q8NBC4 194 aa13.6□□□□□ -0.23
RAB11B-201ENST00000328024 CST9LQ9H4G1 147 aa13.6□□□□□ -0.23
RAB11B-201ENST00000328024 TSHBP01222 138 aa13.58□□□□□ -0.23
RAB11B-201ENST00000328024 PTTG1IPP53801 180 aa13.58□□□□□ -0.23
RAB11B-201ENST00000328024 CHAC1Q9BUX1 264 aa13.58□□□□□ -0.23
RAB11B-201ENST00000328024 PYGO1Q9Y3Y4 419 aa13.58□□□□□ -0.23
RAB11B-201ENST00000328024 TM2D2Q9BX73 214 aa13.58□□□□□ -0.24
RAB11B-201ENST00000328024 VAMP3Q15836 100 aa13.57□□□□□ -0.24
RAB11B-201ENST00000328024 CHCHD5Q9BSY4 110 aa13.57□□□□□ -0.24
RAB11B-201ENST00000328024 MYMXA0A1B0GTQ4 84 aa13.56□□□□□ -0.24
RAB11B-201ENST00000328024 K7EP13 123 aa13.56□□□□□ -0.24
RAB11B-201ENST00000328024 COTL1Q14019 142 aa13.56□□□□□ -0.24
RAB11B-201ENST00000328024 C11orf86A6NJI1 115 aa13.55□□□□□ -0.24
RAB11B-201ENST00000328024 IBA57-AS1B1ANH7 110 aa13.55□□□□□ -0.24
RAB11B-201ENST00000328024 Q6ZRN7 208 aaPredicted RBP13.55□□□□□ -0.24
RAB11B-201ENST00000328024 TMEM262E9PQX1 116 aa13.55□□□□□ -0.24
RAB11B-201ENST00000328024 RPL39P62891 51 aaKnown RBP13.55□□□□□ -0.24
RAB11B-201ENST00000328024 GAGE6Q13070 117 aa13.55□□□□□ -0.24
RAB11B-201ENST00000328024 NFE4Q86UQ8 179 aa13.55□□□□□ -0.24
RAB11B-201ENST00000328024 C10orf126Q8N4M7 172 aa13.55□□□□□ -0.24
RAB11B-201ENST00000328024 IGLV4-69A0A075B6H9 119 aa13.54□□□□□ -0.24
RAB11B-201ENST00000328024 C9orf118A6NHY6 69 aa13.54□□□□□ -0.24
RAB11B-201ENST00000328024 CEND1Q8N111 149 aa13.53□□□□□ -0.24
RAB11B-201ENST00000328024 MAPKAPK5-AS1Q8N8E1 139 aa13.53□□□□□ -0.24
RAB11B-201ENST00000328024 DNAH11Q96DT5 4516 aa13.53□□□□□ -0.24
RAB11B-201ENST00000328024 SMIM13P0DJ93 91 aa13.53□□□□□ -0.24
RAB11B-201ENST00000328024 TMEM243Q9BU79 118 aa13.53□□□□□ -0.24
RAB11B-201ENST00000328024 CHCHD7Q9BUK0 85 aa13.52□□□□□ -0.25
RAB11B-201ENST00000328024 KLK12Q9UKR0 248 aa13.52□□□□□ -0.25
RAB11B-201ENST00000328024 CCL25O15444 150 aa13.51□□□□□ -0.25
RAB11B-201ENST00000328024 TNP2Q05952 138 aa13.51□□□□□ -0.25
RAB11B-201ENST00000328024 Q6ZVH6 145 aa13.51□□□□□ -0.25
RAB11B-201ENST00000328024 TTTY13Q9BZ97 58 aa13.51□□□□□ -0.25
RAB11B-201ENST00000328024 VCX2Q9H322 139 aa13.51□□□□□ -0.25
RAB11B-201ENST00000328024 PKD1P98161 4303 aa13.51□□□□□ -0.25
RAB11B-201ENST00000328024 GCSHP23434 173 aa13.5□□□□□ -0.25
RAB11B-201ENST00000328024 RBX1P62877 108 aa13.5□□□□□ -0.25
RAB11B-201ENST00000328024 LINC00336Q6ZUF6 198 aa13.5□□□□□ -0.25
RAB11B-201ENST00000328024 Q9HAA7 133 aa13.5□□□□□ -0.25
RAB11B-201ENST00000328024 SPANXA1Q9NS26 97 aa13.5□□□□□ -0.25
RAB11B-201ENST00000328024 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.48□□□□□ -0.25
RAB11B-201ENST00000328024 IGKV2-29A2NJV5 120 aaPredicted RBP13.48□□□□□ -0.25
RAB11B-201ENST00000328024 GTF2H5Q6ZYL4 71 aa13.48□□□□□ -0.25
RAB11B-201ENST00000328024 HECTD4Q9Y4D8 3996 aa13.48□□□□□ -0.25
RAB11B-201ENST00000328024 IGLV4-60A0A075B6I1 120 aa13.48□□□□□ -0.25
RAB11B-201ENST00000328024 IGLV4-3A0A075B6K6 122 aa13.48□□□□□ -0.25
RAB11B-201ENST00000328024 AMMECR1LQ6DCA0 310 aa13.48□□□□□ -0.25
RAB11B-201ENST00000328024 AMELXQ99217 191 aa13.48□□□□□ -0.25
RAB11B-201ENST00000328024 HIST1H4GQ99525 98 aa13.48□□□□□ -0.25
RAB11B-201ENST00000328024 A0A1B0GVY2 172 aa13.47□□□□□ -0.25
RAB11B-201ENST00000328024 ENHOQ6UWT2 76 aa13.47□□□□□ -0.25
RAB11B-201ENST00000328024 ZNF815PA8K554 130 aa13.46□□□□□ -0.25
RAB11B-201ENST00000328024 FXYD2P54710 66 aa13.46□□□□□ -0.25
RAB11B-201ENST00000328024 TMEM170BQ5T4T1 132 aa13.46□□□□□ -0.25
RAB11B-201ENST00000328024 ANGP03950 147 aaKnown RBP13.45□□□□□ -0.26
RAB11B-201ENST00000328024 UBE2WQ96B02 151 aa13.45□□□□□ -0.26
RAB11B-201ENST00000328024 A0A1B0GUV1 79 aa13.45□□□□□ -0.26
RAB11B-201ENST00000328024 UBE2L6O14933 153 aa13.45□□□□□ -0.26
RAB11B-201ENST00000328024 SMAGPQ0VAQ4 97 aa13.45□□□□□ -0.26
RAB11B-201ENST00000328024 TIMM21Q9BVV7 248 aa13.45□□□□□ -0.26
RAB11B-201ENST00000328024 TMEM238LA0A1B0GVL6 79 aa13.44□□□□□ -0.26
RAB11B-201ENST00000328024 GAGE10A6NGK3 116 aa13.44□□□□□ -0.26
RAB11B-201ENST00000328024 A6NJY4 79 aa13.44□□□□□ -0.26
RAB11B-201ENST00000328024 TRAV8-3A0A0A6YYJ7 113 aa13.43□□□□□ -0.26
RAB11B-201ENST00000328024 LEPROTO15243 131 aa13.43□□□□□ -0.26
RAB11B-201ENST00000328024 SCGB1D4Q6XE38 83 aa13.43□□□□□ -0.26
RAB11B-201ENST00000328024 LINC00269Q8N2A0 174 aa13.43□□□□□ -0.26
RAB11B-201ENST00000328024 PRR34Q9NV39 138 aa13.43□□□□□ -0.26
RAB11B-201ENST00000328024 TMEM223A0PJW6 202 aa13.43□□□□□ -0.26
RAB11B-201ENST00000328024 MRPS36P82909 103 aaKnown RBP13.43□□□□□ -0.26
RAB11B-201ENST00000328024 CLPSL2Q6UWE3 100 aa13.43□□□□□ -0.26
RAB11B-201ENST00000328024 PLEKHB2Q96CS7 222 aa13.43□□□□□ -0.26
RAB11B-201ENST00000328024 SPANXB1Q9NS25 103 aaPredicted RBP13.43□□□□□ -0.26
RAB11B-201ENST00000328024 A0A1B0GWB2 263 aa13.42□□□□□ -0.26
RAB11B-201ENST00000328024 H3BUT2 72 aa13.42□□□□□ -0.26
RAB11B-201ENST00000328024 H7C423 109 aa13.42□□□□□ -0.26
RAB11B-201ENST00000328024 BIRC6Q9NR09 4857 aa13.42□□□□□ -0.26
RAB11B-201ENST00000328024 A0A1W2PPM0 123 aa13.41□□□□□ -0.26
RAB11B-201ENST00000328024 J3QQQ9 107 aa13.41□□□□□ -0.26
RAB11B-201ENST00000328024 FABP2P12104 132 aa13.41□□□□□ -0.26
RAB11B-201ENST00000328024 OR5A1Q8NGJ0 315 aa13.41□□□□□ -0.26
RAB11B-201ENST00000328024 UBE2D4Q9Y2X8 147 aa13.41□□□□□ -0.26
RAB11B-201ENST00000328024 LGALS3P17931 250 aaKnown RBP13.4□□□□□ -0.26
RAB11B-201ENST00000328024 K7EP34 96 aa13.4□□□□□ -0.26
RAB11B-201ENST00000328024 ZNF22P17026 224 aaPredicted RBP13.4□□□□□ -0.26
RAB11B-201ENST00000328024 OPRPNQ99935 248 aaPredicted RBP13.4□□□□□ -0.26
RAB11B-201ENST00000328024 NHP2Q9NX24 153 aaKnown RBP13.4□□□□□ -0.26
RAB11B-201ENST00000328024 PKHD1P08F94 4074 aa13.39□□□□□ -0.27
RAB11B-201ENST00000328024 DYNC1H1Q14204 4646 aaKnown RBP13.38□□□□□ -0.27
RAB11B-201ENST00000328024 TINCRA0A1B0GVN0 87 aa13.38□□□□□ -0.27
RAB11B-201ENST00000328024 REG3AQ06141 175 aa13.38□□□□□ -0.27
RAB11B-201ENST00000328024 SRSF9Q13242 221 aaKnown RBP eCLIP13.38□□□□□ -0.27
RAB11B-201ENST00000328024 RAB37Q96AX2 223 aa13.38□□□□□ -0.27
RAB11B-201ENST00000328024 CSDC2Q9Y534 153 aaKnown RBP13.38□□□□□ -0.27
RAB11B-201ENST00000328024 IGKV2D-24A0A075B6R9 120 aa13.37□□□□□ -0.27
RAB11B-201ENST00000328024 LRCOL1A6NCL2 159 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms