RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 CIRBPQ14011 172 aaKnown RBP3.47□□□□□ -1.85
LRIT3-201ENST00000327908 PPDPFQ9H3Y8 114 aa3.47□□□□□ -1.85
LRIT3-201ENST00000327908 Q9HAA7 133 aa3.47□□□□□ -1.85
LRIT3-201ENST00000327908 LEPROTO15243 131 aa3.46□□□□□ -1.86
LRIT3-201ENST00000327908 FOXI1Q12951 378 aa3.46□□□□□ -1.86
LRIT3-201ENST00000327908 COX17Q14061 63 aa3.46□□□□□ -1.86
LRIT3-201ENST00000327908 URB1-AS1Q96HZ7 61 aa3.46□□□□□ -1.86
LRIT3-201ENST00000327908 IGHV3OR16-9A0A0B4J2B5 98 aa3.46□□□□□ -1.86
LRIT3-201ENST00000327908 CKS1BP61024 79 aa3.46□□□□□ -1.86
LRIT3-201ENST00000327908 SPAG11BQ08648 103 aa3.46□□□□□ -1.86
LRIT3-201ENST00000327908 LINC00242Q5T6M2 205 aa3.46□□□□□ -1.86
LRIT3-201ENST00000327908 LGALS3P17931 250 aaKnown RBP3.46□□□□□ -1.86
LRIT3-201ENST00000327908 LINC00173Q6ZV60 143 aa3.46□□□□□ -1.86
LRIT3-201ENST00000327908 ORAOV1Q8WV07 137 aa3.46□□□□□ -1.86
LRIT3-201ENST00000327908 MRPL35Q9NZE8 188 aaKnown RBP3.46□□□□□ -1.86
LRIT3-201ENST00000327908 CMYA5Q8N3K9 4069 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 A0A087WTM6 91 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 A0A096LNJ9 63 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 A0A0J9YXY3 114 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 XCL1P47992 114 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 KRTDAPP60985 99 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 TMEM170BQ5T4T1 132 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 Q6ZVH6 145 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 COX7B2Q8TF08 81 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 CARD19Q96LW7 228 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 Q9UF83 564 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 NOTCH1P46531 2555 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 LOC107984640A0A0U1RRK4 108 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 USP17L23D6RBM5 183 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 TIMM17BO60830 172 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 S100A12P80511 92 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 C6orf226Q5I0X4 101 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 VWFP04275 2813 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 IGLV5-39A0A0G2JS06 123 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 TLX1NBP0CAT3 122 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 FABP4P15090 132 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 SYCNQ0VAF6 134 aa3.45□□□□□ -1.86
LRIT3-201ENST00000327908 Q6ZRN7 208 aaPredicted RBP3.45□□□□□ -1.86
LRIT3-201ENST00000327908 IGKV3OR2-268A0A0C4DH90 116 aa3.44□□□□□ -1.86
LRIT3-201ENST00000327908 E9PLD3 99 aa3.44□□□□□ -1.86
LRIT3-201ENST00000327908 ZNF22P17026 224 aaPredicted RBP3.44□□□□□ -1.86
LRIT3-201ENST00000327908 FAM19A2Q8N3H0 131 aa3.44□□□□□ -1.86
LRIT3-201ENST00000327908 Q8N814 137 aa3.44□□□□□ -1.86
LRIT3-201ENST00000327908 CAMK2N2Q96S95 79 aa3.44□□□□□ -1.86
LRIT3-201ENST00000327908 HIST1H2BLQ99880 126 aa3.44□□□□□ -1.86
LRIT3-201ENST00000327908 A0A0J9YXV3 536 aa3.44□□□□□ -1.86
LRIT3-201ENST00000327908 TMEM223A0PJW6 202 aa3.44□□□□□ -1.86
LRIT3-201ENST00000327908 C3orf79P0CE67 100 aa3.44□□□□□ -1.86
LRIT3-201ENST00000327908 hDV102S1A0JD36 115 aa3.43□□□□□ -1.86
LRIT3-201ENST00000327908 LINC00310P59036 64 aa3.43□□□□□ -1.86
LRIT3-201ENST00000327908 KRTAP26-1Q6PEX3 210 aa3.43□□□□□ -1.86
LRIT3-201ENST00000327908 NBEAL1Q6ZS30 2694 aa3.43□□□□□ -1.86
LRIT3-201ENST00000327908 IGLV5-52A0A0A0MRZ9 124 aa3.43□□□□□ -1.86
LRIT3-201ENST00000327908 M0R2N4 97 aa3.43□□□□□ -1.86
LRIT3-201ENST00000327908 SMIM6P0DI80 62 aa3.43□□□□□ -1.86
LRIT3-201ENST00000327908 ALMS1Q8TCU4 4167 aa3.43□□□□□ -1.86
LRIT3-201ENST00000327908 SMIM1B2RUZ4 78 aa3.42□□□□□ -1.86
LRIT3-201ENST00000327908 DLEU1O43261 78 aa3.42□□□□□ -1.86
LRIT3-201ENST00000327908 SCGB1D1O95968 90 aa3.42□□□□□ -1.86
LRIT3-201ENST00000327908 IFITM1P13164 125 aa3.42□□□□□ -1.86
LRIT3-201ENST00000327908 JOSD1Q15040 202 aaPredicted RBP3.42□□□□□ -1.86
LRIT3-201ENST00000327908 CLPSL2Q6UWE3 100 aa3.42□□□□□ -1.86
LRIT3-201ENST00000327908 TMEM238C9JI98 176 aa3.42□□□□□ -1.86
LRIT3-201ENST00000327908 CDKN2A-AS1Q9UH64 79 aa3.42□□□□□ -1.86
LRIT3-201ENST00000327908 LRCOL1A6NCL2 159 aa3.42□□□□□ -1.86
LRIT3-201ENST00000327908 RPL24P83731 157 aaKnown RBP3.42□□□□□ -1.86
LRIT3-201ENST00000327908 C5orf38Q86SI9 138 aa3.42□□□□□ -1.86
LRIT3-201ENST00000327908 VAMP8Q9BV40 100 aa3.42□□□□□ -1.86
LRIT3-201ENST00000327908 DNAH9Q9NYC9 4486 aa3.42□□□□□ -1.86
LRIT3-201ENST00000327908 J3QQQ9 107 aa3.41□□□□□ -1.86
LRIT3-201ENST00000327908 LBHQ53QV2 105 aaPredicted RBP3.41□□□□□ -1.86
LRIT3-201ENST00000327908 C9orf163Q8N9P6 203 aa3.41□□□□□ -1.86
LRIT3-201ENST00000327908 PLA2G2DQ9UNK4 145 aa3.41□□□□□ -1.86
LRIT3-201ENST00000327908 ZC2HC1BQ5TFG8 222 aa3.41□□□□□ -1.86
LRIT3-201ENST00000327908 NDUFA12Q9UI09 145 aa3.41□□□□□ -1.86
LRIT3-201ENST00000327908 RTL8CO15255 209 aa3.41□□□□□ -1.86
LRIT3-201ENST00000327908 C15orf56Q8N910 161 aa3.41□□□□□ -1.86
LRIT3-201ENST00000327908 KRTAP1-5Q9BYS1 174 aa3.41□□□□□ -1.86
LRIT3-201ENST00000327908 OPRPNQ99935 248 aaPredicted RBP3.4□□□□□ -1.86
LRIT3-201ENST00000327908 TOMM7Q9P0U1 55 aa3.4□□□□□ -1.86
LRIT3-201ENST00000327908 TP73-AS1Q9UF72 201 aa3.4□□□□□ -1.86
LRIT3-201ENST00000327908 H0Y8G0 127 aa3.4□□□□□ -1.86
LRIT3-201ENST00000327908 TAL2Q16559 108 aa3.4□□□□□ -1.86
LRIT3-201ENST00000327908 RNASE13Q5GAN3 156 aaKnown RBP3.4□□□□□ -1.86
LRIT3-201ENST00000327908 MEIG1Q5JSS6 88 aa3.4□□□□□ -1.86
LRIT3-201ENST00000327908 FAM104AQ969W3 186 aa3.4□□□□□ -1.86
LRIT3-201ENST00000327908 ZFHX3Q15911 3703 aa3.4□□□□□ -1.87
LRIT3-201ENST00000327908 NDUFC2-KCTD14E9PQ53 114 aa3.4□□□□□ -1.87
LRIT3-201ENST00000327908 NUPR1O60356 82 aa3.4□□□□□ -1.87
LRIT3-201ENST00000327908 SPINK8P0C7L1 97 aa3.4□□□□□ -1.87
LRIT3-201ENST00000327908 MIEN1Q9BRT3 115 aa3.4□□□□□ -1.87
LRIT3-201ENST00000327908 CUBNO60494 3623 aa3.4□□□□□ -1.87
LRIT3-201ENST00000327908 HUWE1Q7Z6Z7 4374 aaKnown RBP3.4□□□□□ -1.87
LRIT3-201ENST00000327908 MEGF8Q7Z7M0 2845 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 C16orf90A8MZG2 172 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 LINC00518Q8N0U6 118 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 TMEM238LA0A1B0GVL6 79 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 A6NJY4 79 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 HIGD1BQ9P298 99 aa3.39□□□□□ -1.87
LRIT3-201ENST00000327908 ERG28Q9UKR5 140 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms