RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 LINC00476Q8WZB0 136 aa10.24□□□□□ -0.77
PRPF3-201ENST00000324862 ZNF22P17026 224 aaPredicted RBP10.24□□□□□ -0.77
PRPF3-201ENST00000324862 C5orf38Q86SI9 138 aa10.23□□□□□ -0.77
PRPF3-201ENST00000324862 NFE4Q86UQ8 179 aa10.23□□□□□ -0.77
PRPF3-201ENST00000324862 LINC00469Q8N7U9 141 aa10.23□□□□□ -0.77
PRPF3-201ENST00000324862 GEMIN7Q9H840 131 aaKnown RBP10.23□□□□□ -0.77
PRPF3-201ENST00000324862 TINCRA0A1B0GVN0 87 aa10.23□□□□□ -0.77
PRPF3-201ENST00000324862 IBA57-AS1B1ANH7 110 aa10.23□□□□□ -0.77
PRPF3-201ENST00000324862 SS18Q15532 418 aa10.23□□□□□ -0.77
PRPF3-201ENST00000324862 PLNP26678 52 aa10.22□□□□□ -0.77
PRPF3-201ENST00000324862 IGKV2D-24A0A075B6R9 120 aa10.22□□□□□ -0.77
PRPF3-201ENST00000324862 TRAV8-3A0A0A6YYJ7 113 aa10.22□□□□□ -0.77
PRPF3-201ENST00000324862 NBDYA0A0U1RRE5 68 aa10.22□□□□□ -0.77
PRPF3-201ENST00000324862 IGHV3OR16-9A0A0B4J2B5 98 aa10.21□□□□□ -0.77
PRPF3-201ENST00000324862 GAGE12HA6NDE8 117 aa10.21□□□□□ -0.77
PRPF3-201ENST00000324862 SPINK8P0C7L1 97 aa10.21□□□□□ -0.77
PRPF3-201ENST00000324862 PAM16Q9Y3D7 125 aa10.21□□□□□ -0.77
PRPF3-201ENST00000324862 ANKRD39Q53RE8 183 aa10.21□□□□□ -0.78
PRPF3-201ENST00000324862 FAM19A3Q7Z5A8 133 aa10.21□□□□□ -0.78
PRPF3-201ENST00000324862 MIAQ16674 131 aa10.2□□□□□ -0.78
PRPF3-201ENST00000324862 KRTAP26-1Q6PEX3 210 aa10.2□□□□□ -0.78
PRPF3-201ENST00000324862 HERVK_113P63121 156 aa10.19□□□□□ -0.78
PRPF3-201ENST00000324862 FOXI1Q12951 378 aa10.19□□□□□ -0.78
PRPF3-201ENST00000324862 TP73-AS1Q9UF72 201 aa10.19□□□□□ -0.78
PRPF3-201ENST00000324862 TRAV9-2A0A087WT02 112 aa10.19□□□□□ -0.78
PRPF3-201ENST00000324862 IGKV2D-26A0A0A0MRZ7 120 aa10.19□□□□□ -0.78
PRPF3-201ENST00000324862 C10orf126Q8N4M7 172 aa10.19□□□□□ -0.78
PRPF3-201ENST00000324862 MAPKAPK5-AS1Q8N8E1 139 aa10.19□□□□□ -0.78
PRPF3-201ENST00000324862 IGLV5-45A0A087WSX0 123 aa10.18□□□□□ -0.78
PRPF3-201ENST00000324862 SMIM6P0DI80 62 aa10.18□□□□□ -0.78
PRPF3-201ENST00000324862 C12orf57Q99622 126 aa10.18□□□□□ -0.78
PRPF3-201ENST00000324862 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
PRPF3-201ENST00000324862 TTTY13Q9BZ97 58 aa10.18□□□□□ -0.78
PRPF3-201ENST00000324862 CD164L2Q6UWJ8 174 aa10.18□□□□□ -0.78
PRPF3-201ENST00000324862 DNAH6Q9C0G6 4158 aa10.17□□□□□ -0.78
PRPF3-201ENST00000324862 TMEM223A0PJW6 202 aa10.17□□□□□ -0.78
PRPF3-201ENST00000324862 TRAV8-4A0A0B4J246 113 aa10.16□□□□□ -0.78
PRPF3-201ENST00000324862 SMIM1B2RUZ4 78 aa10.16□□□□□ -0.78
PRPF3-201ENST00000324862 SEC11AP67812 179 aa10.16□□□□□ -0.78
PRPF3-201ENST00000324862 VAMP8Q9BV40 100 aa10.16□□□□□ -0.78
PRPF3-201ENST00000324862 TSPEAR-AS2P59090 65 aa10.16□□□□□ -0.78
PRPF3-201ENST00000324862 LINC00518Q8N0U6 118 aa10.16□□□□□ -0.78
PRPF3-201ENST00000324862 LINC00526Q96FQ7 95 aa10.15□□□□□ -0.78
PRPF3-201ENST00000324862 A0A087WZ39 114 aa10.15□□□□□ -0.79
PRPF3-201ENST00000324862 LECT2O14960 151 aa10.15□□□□□ -0.79
PRPF3-201ENST00000324862 SPATA45Q537H7 98 aa10.15□□□□□ -0.79
PRPF3-201ENST00000324862 COX7A2LO14548 114 aa10.14□□□□□ -0.79
PRPF3-201ENST00000324862 NMUP48645 174 aa10.14□□□□□ -0.79
PRPF3-201ENST00000324862 Q6ZR54 194 aa10.14□□□□□ -0.79
PRPF3-201ENST00000324862 RYR2Q92736 4967 aa10.13□□□□□ -0.79
PRPF3-201ENST00000324862 TTC32Q5I0X7 151 aa10.13□□□□□ -0.79
PRPF3-201ENST00000324862 PCP2Q8IVA1 136 aa10.13□□□□□ -0.79
PRPF3-201ENST00000324862 MALP21145 153 aa10.13□□□□□ -0.79
PRPF3-201ENST00000324862 C14orf144Q96I85 54 aa10.13□□□□□ -0.79
PRPF3-201ENST00000324862 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
PRPF3-201ENST00000324862 FRAS1Q86XX4 4008 aa10.12□□□□□ -0.79
PRPF3-201ENST00000324862 HSBP1L1C9JCN9 74 aa10.12□□□□□ -0.79
PRPF3-201ENST00000324862 H3BRM9 83 aa10.12□□□□□ -0.79
PRPF3-201ENST00000324862 K7EP13 123 aa10.12□□□□□ -0.79
PRPF3-201ENST00000324862 WFDC2Q14508 124 aa10.12□□□□□ -0.79
PRPF3-201ENST00000324862 IGHV1-58A0A0C4DH39 117 aa10.12□□□□□ -0.79
PRPF3-201ENST00000324862 PRO1933Q9H354 126 aa10.12□□□□□ -0.79
PRPF3-201ENST00000324862 E9PLD3 99 aa10.11□□□□□ -0.79
PRPF3-201ENST00000324862 HIGD2BQ4VC39 106 aa10.11□□□□□ -0.79
PRPF3-201ENST00000324862 S100A12P80511 92 aa10.11□□□□□ -0.79
PRPF3-201ENST00000324862 Q6ZRN7 208 aaPredicted RBP10.11□□□□□ -0.79
PRPF3-201ENST00000324862 DNAH17Q9UFH2 4485 aa10.1□□□□□ -0.79
PRPF3-201ENST00000324862 IGLV5-39A0A0G2JS06 123 aa10.1□□□□□ -0.79
PRPF3-201ENST00000324862 C6orf223Q8N319 242 aa10.1□□□□□ -0.79
PRPF3-201ENST00000324862 C15orf56Q8N910 161 aa10.1□□□□□ -0.79
PRPF3-201ENST00000324862 ORAOV1Q8WV07 137 aa10.09□□□□□ -0.79
PRPF3-201ENST00000324862 HERVK_113P61574 105 aa10.09□□□□□ -0.79
PRPF3-201ENST00000324862 PSCAO43653 123 aa10.08□□□□□ -0.8
PRPF3-201ENST00000324862 C2orf82Q6UX34 121 aa10.08□□□□□ -0.8
PRPF3-201ENST00000324862 J3QQQ9 107 aa10.08□□□□□ -0.8
PRPF3-201ENST00000324862 RYR3Q15413 4870 aa10.08□□□□□ -0.8
PRPF3-201ENST00000324862 LEPROTO15243 131 aa10.07□□□□□ -0.8
PRPF3-201ENST00000324862 RMI2Q96E14 147 aa10.07□□□□□ -0.8
PRPF3-201ENST00000324862 FAT2Q9NYQ8 4349 aa10.07□□□□□ -0.8
PRPF3-201ENST00000324862 LCE6AA0A183 80 aa10.07□□□□□ -0.8
PRPF3-201ENST00000324862 USP17L23D6RBM5 183 aa10.07□□□□□ -0.8
PRPF3-201ENST00000324862 KIAA0087Q14695 138 aa10.07□□□□□ -0.8
PRPF3-201ENST00000324862 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
PRPF3-201ENST00000324862 COX7B2Q8TF08 81 aa10.06□□□□□ -0.8
PRPF3-201ENST00000324862 SPAG11BQ08648 103 aa10.05□□□□□ -0.8
PRPF3-201ENST00000324862 TM2D2Q9BX73 214 aa10.05□□□□□ -0.8
PRPF3-201ENST00000324862 LGALS3P17931 250 aaKnown RBP10.04□□□□□ -0.8
PRPF3-201ENST00000324862 C6orf226Q5I0X4 101 aa10.04□□□□□ -0.8
PRPF3-201ENST00000324862 C10orf25Q5T742 122 aa10.04□□□□□ -0.8
PRPF3-201ENST00000324862 PLEKHB2Q96CS7 222 aa10.04□□□□□ -0.8
PRPF3-201ENST00000324862 ZNF815PA8K554 130 aa10.04□□□□□ -0.8
PRPF3-201ENST00000324862 C1orf134Q5TEV5 83 aa10.04□□□□□ -0.8
PRPF3-201ENST00000324862 NDUFA12Q9UI09 145 aa10.04□□□□□ -0.8
PRPF3-201ENST00000324862 APOMO95445 188 aa10.03□□□□□ -0.8
PRPF3-201ENST00000324862 COX8AP10176 69 aa10.03□□□□□ -0.8
PRPF3-201ENST00000324862 COX11Q9Y6N1 276 aa10.03□□□□□ -0.8
PRPF3-201ENST00000324862 SLPIP03973 132 aa10.03□□□□□ -0.8
PRPF3-201ENST00000324862 FUSP35637 526 aaKnown RBP eCLIP10.03□□□□□ -0.8
PRPF3-201ENST00000324862 LRCOL1A6NCL2 159 aa10.02□□□□□ -0.81
PRPF3-201ENST00000324862 PRSS2P07478 247 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms