RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 IGLV4-3A0A075B6K6 122 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 IGHV3-73A0A0B4J1V6 119 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 TRAV26-2A0A0B4J265 109 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 IGHV1-58A0A0C4DH39 117 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 S100A6P06703 90 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 NMUP48645 174 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 Q8N976 141 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 SCGB3A1Q96QR1 104 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 MAP1LC3CQ9BXW4 147 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 LOC100131303A0A0U1RQF7 123 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 C11orf86A6NJI1 115 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 LEPROTL1O95214 131 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 UBE2D1P51668 147 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 PMCHL1Q16048 86 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 VCX2Q9H322 139 aa2.22□□□□□ -2.05
SCAMP1-201ENST00000320280 GVQW2A0A096LPI5 108 aaPredicted RBP2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 MUC21A0A0G2JKD1 596 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 MUC21A0A140T8X8 626 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 B5MCH6 92 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 F8VRH5 84 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 HERVK_113P61574 105 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 REG3AQ06141 175 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 RNASEKQ6P5S7 137 aaKnown RBP2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 IFI27L1Q96BM0 104 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 URB1-AS1Q96HZ7 61 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 C1orf43Q9BWL3 253 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 MGAM2Q2M2H8 2515 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 A0A087WZ39 114 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 C5orf52A6NGY3 159 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 SMKR1H3BMG3 65 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 SERF1AO75920 110 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 C1orf134Q5TEV5 83 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 VPS13DQ5THJ4 4388 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 A0A096LNJ9 63 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 LINC00959A0A1B0GUT2 108 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 PRB4P10163 310 aaPredicted RBP2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 CNBPP62633 177 aaKnown RBP2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 LINC01545Q5VT33 79 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 COPS9Q8WXC6 57 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 BAALCQ8WXS3 180 aa2.21□□□□□ -2.06
SCAMP1-201ENST00000320280 PKD1L1Q8TDX9 2849 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 TRBV30A0A0K0K1B3 111 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 TLX1NBP0CAT3 122 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 S100A2P29034 98 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 HERV-K104P63124 156 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 MPV17L2Q567V2 206 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 KRTAP26-1Q6PEX3 210 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 Q6ZRN7 208 aaPredicted RBP2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 WFDC10BQ8IUB3 73 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 Q8IZM0 81 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 HIST3H2BBQ8N257 126 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 PLEKHB2Q96CS7 222 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 CST9LQ9H4G1 147 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 IFITM10A6NMD0 228 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 ANGP03950 147 aaKnown RBP2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 GAGE6Q13070 117 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 COX17Q14061 63 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 KIAA1644Q3SXP7 199 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 LINC00173Q6ZV60 143 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 VPS13BQ7Z7G8 4022 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 MEGF8Q7Z7M0 2845 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 NBEAL1Q6ZS30 2694 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 IGHV3-64A0A075B6Q5 118 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 IGLV5-39A0A0G2JS06 123 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 A0A0J9YXY3 114 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 LOC389332A0A1B0GUA5 103 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 TMEM262E9PQX1 116 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 COX7A2LO14548 114 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 TIMM17BO60830 172 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 DPM2O94777 84 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 ZFAND6Q6FIF0 208 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 ENHOQ6UWT2 76 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 PMCHL2Q9BQD1 86 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 LINC00474Q9P2X8 69 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 CBY1Q9Y3M2 126 aa2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 CHTOPQ9Y3Y2 248 aaKnown RBP2.2□□□□□ -2.06
SCAMP1-201ENST00000320280 PKD1P98161 4303 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 IGLV10-54A0A075B6I4 117 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 IGHV3OR16-9A0A0B4J2B5 98 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 SYS1-DBNDD2H3BUS1 97 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 Q6ZUT4 128 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 Q6ZVH6 145 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 GEMIN7Q9H840 131 aaKnown RBP2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 DNAH2Q9P225 4427 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 IGKV2-29A2NJV5 120 aaPredicted RBP2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 SCO1O75880 301 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 GAS8-AS1O95177 125 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 CHCHD10Q8WYQ3 142 aaPredicted RBP2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 FAM104AQ969W3 186 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 MRPL35Q9NZE8 188 aaKnown RBP2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 DLEU1O43261 78 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 IGKCP01834 107 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 PRSS2P07478 247 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 NDUFA6P56556 154 aa2.19□□□□□ -2.06
SCAMP1-201ENST00000320280 DNAH17Q9UFH2 4485 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 IGLV4-69A0A075B6H9 119 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 IGLV4-60A0A075B6I1 120 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 PRSS29PA6NIE9 313 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms