RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 EIF4EBP3O60516 100 aaPredicted RBP9.01□□□□□ -0.97
RPP40-201ENST00000319533 ESDP10768 282 aa9.01□□□□□ -0.97
RPP40-201ENST00000319533 RAB5BP61020 215 aa9.01□□□□□ -0.97
RPP40-201ENST00000319533 C18orf32Q8TCD1 76 aa9.01□□□□□ -0.97
RPP40-201ENST00000319533 KIR2DL4Q99706 377 aa9.01□□□□□ -0.97
RPP40-201ENST00000319533 PLAC8Q9NZF1 115 aa9.01□□□□□ -0.97
RPP40-201ENST00000319533 LINC00310P59036 64 aa9□□□□□ -0.97
RPP40-201ENST00000319533 SMAGPQ0VAQ4 97 aa9□□□□□ -0.97
RPP40-201ENST00000319533 ORMDL3Q8N138 153 aa9□□□□□ -0.97
RPP40-201ENST00000319533 OR5A1Q8NGJ0 315 aa9□□□□□ -0.97
RPP40-201ENST00000319533 PRELID3AQ96N28 172 aa9□□□□□ -0.97
RPP40-201ENST00000319533 C20orf78Q9BR46 151 aa9□□□□□ -0.97
RPP40-201ENST00000319533 AP5S1Q9NUS5 200 aa9□□□□□ -0.97
RPP40-201ENST00000319533 CHTF8P0CG12 524 aa8.99□□□□□ -0.97
RPP40-201ENST00000319533 URB1-AS1Q96HZ7 61 aa8.99□□□□□ -0.97
RPP40-201ENST00000319533 GAGE12HA6NDE8 117 aa8.98□□□□□ -0.97
RPP40-201ENST00000319533 TCAPO15273 167 aa8.98□□□□□ -0.97
RPP40-201ENST00000319533 TNFRSF6BO95407 300 aa8.98□□□□□ -0.97
RPP40-201ENST00000319533 PPBPP02775 128 aa8.98□□□□□ -0.97
RPP40-201ENST00000319533 RPL32P62910 135 aaKnown RBP8.97□□□□□ -0.97
RPP40-201ENST00000319533 CFAP161Q6P656 301 aa8.97□□□□□ -0.97
RPP40-201ENST00000319533 MRPL52Q86TS9 123 aaKnown RBP8.97□□□□□ -0.97
RPP40-201ENST00000319533 C15orf56Q8N910 161 aa8.97□□□□□ -0.97
RPP40-201ENST00000319533 CHCHD10Q8WYQ3 142 aaPredicted RBP8.97□□□□□ -0.97
RPP40-201ENST00000319533 TMEM18Q96B42 140 aa8.97□□□□□ -0.97
RPP40-201ENST00000319533 DPH3Q96FX2 82 aa8.97□□□□□ -0.97
RPP40-201ENST00000319533 NUPR1O60356 82 aa8.96□□□□□ -0.98
RPP40-201ENST00000319533 NDUFA6P56556 154 aa8.96□□□□□ -0.98
RPP40-201ENST00000319533 SERF1AO75920 110 aa8.95□□□□□ -0.98
RPP40-201ENST00000319533 ZNF664Q8N3J9 261 aa8.95□□□□□ -0.98
RPP40-201ENST00000319533 SMIM2Q9BVW6 85 aa8.95□□□□□ -0.98
RPP40-201ENST00000319533 CDC42SE2Q9NRR3 84 aa8.95□□□□□ -0.98
RPP40-201ENST00000319533 RNF213Q63HN8 5207 aa8.95□□□□□ -0.98
RPP40-201ENST00000319533 LOC389332A0A1B0GUA5 103 aa8.94□□□□□ -0.98
RPP40-201ENST00000319533 LINC00959A0A1B0GUT2 108 aa8.94□□□□□ -0.98
RPP40-201ENST00000319533 SS18Q15532 418 aa8.94□□□□□ -0.98
RPP40-201ENST00000319533 COA6Q5JTJ3 125 aaKnown RBP8.94□□□□□ -0.98
RPP40-201ENST00000319533 C7orf33Q8WU49 177 aa8.94□□□□□ -0.98
RPP40-201ENST00000319533 LINC01600Q96MT4 127 aa8.94□□□□□ -0.98
RPP40-201ENST00000319533 LAMTOR2Q9Y2Q5 125 aa8.94□□□□□ -0.98
RPP40-201ENST00000319533 PRSS47A8MTI9 375 aa8.93□□□□□ -0.98
RPP40-201ENST00000319533 IFI27P40305 119 aaPredicted RBP8.93□□□□□ -0.98
RPP40-201ENST00000319533 XCL1P47992 114 aa8.93□□□□□ -0.98
RPP40-201ENST00000319533 COX6A2Q02221 97 aa8.93□□□□□ -0.98
RPP40-201ENST00000319533 MAP1LC3AQ9H492 121 aa8.93□□□□□ -0.98
RPP40-201ENST00000319533 UBE2D4Q9Y2X8 147 aa8.93□□□□□ -0.98
RPP40-201ENST00000319533 CSDC2Q9Y534 153 aaKnown RBP8.93□□□□□ -0.98
RPP40-201ENST00000319533 C5orf52A6NGY3 159 aa8.92□□□□□ -0.98
RPP40-201ENST00000319533 CCL25O15444 150 aa8.92□□□□□ -0.98
RPP40-201ENST00000319533 SNRPEP62304 92 aaKnown RBP8.92□□□□□ -0.98
RPP40-201ENST00000319533 BAGE3Q86Y29 109 aa8.92□□□□□ -0.98
RPP40-201ENST00000319533 PRSS3P2Q8NHM4 247 aa8.92□□□□□ -0.98
RPP40-201ENST00000319533 GVQW2A0A096LPI5 108 aaPredicted RBP8.91□□□□□ -0.98
RPP40-201ENST00000319533 PRR3P79522 188 aaKnown RBP8.91□□□□□ -0.98
RPP40-201ENST00000319533 FOXI1Q12951 378 aa8.91□□□□□ -0.98
RPP40-201ENST00000319533 TIMM21Q9BVV7 248 aa8.91□□□□□ -0.98
RPP40-201ENST00000319533 LINC01546A6NGU7 62 aa8.9□□□□□ -0.98
RPP40-201ENST00000319533 IFITM10A6NMD0 228 aa8.9□□□□□ -0.98
RPP40-201ENST00000319533 MAJINQ3KP22 176 aa8.9□□□□□ -0.98
RPP40-201ENST00000319533 HIGD2BQ4VC39 106 aa8.9□□□□□ -0.98
RPP40-201ENST00000319533 PDZD11Q5EBL8 140 aa8.9□□□□□ -0.98
RPP40-201ENST00000319533 CD164L2Q6UWJ8 174 aa8.9□□□□□ -0.98
RPP40-201ENST00000319533 HIST3H2BBQ8N257 126 aa8.9□□□□□ -0.98
RPP40-201ENST00000319533 Q8N8P6 123 aa8.9□□□□□ -0.98
RPP40-201ENST00000319533 A0A096LNJ9 63 aa8.89□□□□□ -0.99
RPP40-201ENST00000319533 S100A6P06703 90 aa8.89□□□□□ -0.99
RPP40-201ENST00000319533 PMCHL1Q16048 86 aa8.89□□□□□ -0.99
RPP40-201ENST00000319533 SPANXA1Q9NS26 97 aa8.89□□□□□ -0.99
RPP40-201ENST00000319533 TRAV13-1A0A0B4J241 112 aa8.88□□□□□ -0.99
RPP40-201ENST00000319533 IGHV1-58A0A0C4DH39 117 aa8.88□□□□□ -0.99
RPP40-201ENST00000319533 LINC00614P0C842 121 aa8.88□□□□□ -0.99
RPP40-201ENST00000319533 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
RPP40-201ENST00000319533 RPL39P62891 51 aaKnown RBP8.88□□□□□ -0.99
RPP40-201ENST00000319533 RNASE13Q5GAN3 156 aaKnown RBP8.88□□□□□ -0.99
RPP40-201ENST00000319533 Q6ZUT4 128 aa8.88□□□□□ -0.99
RPP40-201ENST00000319533 FA2HQ7L5A8 372 aa8.88□□□□□ -0.99
RPP40-201ENST00000319533 STPG4Q8N801 248 aa8.88□□□□□ -0.99
RPP40-201ENST00000319533 NXT2Q9NPJ8 142 aaKnown RBP8.88□□□□□ -0.99
RPP40-201ENST00000319533 A0A096LNI7 61 aa8.87□□□□□ -0.99
RPP40-201ENST00000319533 IGKV2-24A0A0C4DH68 120 aa8.87□□□□□ -0.99
RPP40-201ENST00000319533 A0A0J9YXV3 536 aa8.87□□□□□ -0.99
RPP40-201ENST00000319533 MALP21145 153 aa8.87□□□□□ -0.99
RPP40-201ENST00000319533 FAM19A2Q8N3H0 131 aa8.87□□□□□ -0.99
RPP40-201ENST00000319533 CHCHD1Q96BP2 118 aaKnown RBP8.87□□□□□ -0.99
RPP40-201ENST00000319533 COX7A2LO14548 114 aa8.86□□□□□ -0.99
RPP40-201ENST00000319533 LINC00474Q9P2X8 69 aa8.86□□□□□ -0.99
RPP40-201ENST00000319533 LOC100996750A0A140TA64 210 aa8.85□□□□□ -0.99
RPP40-201ENST00000319533 ZNF561-AS1K7EIQ3 104 aa8.85□□□□□ -0.99
RPP40-201ENST00000319533 MRPS36P82909 103 aaKnown RBP8.85□□□□□ -0.99
RPP40-201ENST00000319533 SRSF9Q13242 221 aaKnown RBP eCLIP8.85□□□□□ -0.99
RPP40-201ENST00000319533 SPINK6Q6UWN8 80 aa8.85□□□□□ -0.99
RPP40-201ENST00000319533 KRTAP4-6Q9BYQ5 205 aa8.85□□□□□ -0.99
RPP40-201ENST00000319533 PKIGQ9Y2B9 76 aa8.85□□□□□ -0.99
RPP40-201ENST00000319533 LOC105371267A0A1B0GV96 52 aa8.84□□□□□ -0.99
RPP40-201ENST00000319533 HSBP1O75506 76 aa8.84□□□□□ -0.99
RPP40-201ENST00000319533 ODF1Q14990 250 aa8.84□□□□□ -0.99
RPP40-201ENST00000319533 ORMDL2Q53FV1 153 aa8.84□□□□□ -0.99
RPP40-201ENST00000319533 LINC00173Q6ZV60 143 aa8.84□□□□□ -0.99
RPP40-201ENST00000319533 HIST1H2BLQ99880 126 aa8.84□□□□□ -0.99
RPP40-201ENST00000319533 K7EMI3 77 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms