RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 Q9UF83 564 aa6.5□□□□□ -1.37
USF3-201ENST00000316407 IGLV9-49A0A0B4J1Y8 123 aa6.5□□□□□ -1.37
USF3-201ENST00000316407 PRM2P04554 102 aa6.5□□□□□ -1.37
USF3-201ENST00000316407 P0C879 139 aa6.5□□□□□ -1.37
USF3-201ENST00000316407 C4orf3Q8WVX3 66 aa6.5□□□□□ -1.37
USF3-201ENST00000316407 LINC00208Q96KT6 92 aa6.5□□□□□ -1.37
USF3-201ENST00000316407 TRAV7A0A075B6U4 112 aa6.5□□□□□ -1.37
USF3-201ENST00000316407 MAP6D1Q9H9H5 199 aa6.5□□□□□ -1.37
USF3-201ENST00000316407 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.5□□□□□ -1.37
USF3-201ENST00000316407 TSHBP01222 138 aa6.5□□□□□ -1.37
USF3-201ENST00000316407 JMJD1CQ15652 2540 aa6.49□□□□□ -1.37
USF3-201ENST00000316407 LINC01548A6NM66 108 aa6.49□□□□□ -1.37
USF3-201ENST00000316407 PRO0628Q9UI54 55 aa6.49□□□□□ -1.37
USF3-201ENST00000316407 LINC00310P59036 64 aa6.49□□□□□ -1.37
USF3-201ENST00000316407 C9orf66Q5T8R8 295 aa6.49□□□□□ -1.37
USF3-201ENST00000316407 ZNF843Q8N446 348 aa6.49□□□□□ -1.37
USF3-201ENST00000316407 HILS1P60008 231 aa6.49□□□□□ -1.37
USF3-201ENST00000316407 SPINK1P00995 79 aa6.49□□□□□ -1.37
USF3-201ENST00000316407 BRWD1-AS2P59051 145 aa6.49□□□□□ -1.37
USF3-201ENST00000316407 PLA2G2AP14555 144 aa6.49□□□□□ -1.37
USF3-201ENST00000316407 C9orf116Q5BN46 136 aaPredicted RBP6.48□□□□□ -1.37
USF3-201ENST00000316407 C1orf229Q6ZS94 237 aaPredicted RBP6.48□□□□□ -1.37
USF3-201ENST00000316407 Q8N7P7 452 aa6.47□□□□□ -1.37
USF3-201ENST00000316407 PRO0255Q9UI72 69 aa6.47□□□□□ -1.37
USF3-201ENST00000316407 Q8N3U1 123 aa6.47□□□□□ -1.37
USF3-201ENST00000316407 NAV2Q8IVL1 2488 aa6.47□□□□□ -1.37
USF3-201ENST00000316407 NCOR2Q9Y618 2525 aa6.47□□□□□ -1.37
USF3-201ENST00000316407 IGFL3Q6UXB1 125 aa6.46□□□□□ -1.37
USF3-201ENST00000316407 GPHB5Q86YW7 130 aa6.46□□□□□ -1.37
USF3-201ENST00000316407 PRR9Q5T870 116 aa6.46□□□□□ -1.38
USF3-201ENST00000316407 LOC100131303A0A0U1RQF7 123 aa6.46□□□□□ -1.38
USF3-201ENST00000316407 LINC01547P58512 204 aaPredicted RBP6.46□□□□□ -1.38
USF3-201ENST00000316407 ZNF73O43830 326 aaPredicted RBP6.46□□□□□ -1.38
USF3-201ENST00000316407 DEFB116Q30KQ4 102 aa6.46□□□□□ -1.38
USF3-201ENST00000316407 TRBV6-8A0A0A6YYG3 113 aa6.45□□□□□ -1.38
USF3-201ENST00000316407 PCOTHQ58A44 107 aa6.45□□□□□ -1.38
USF3-201ENST00000316407 NTM-AS1Q6ZSK4 140 aa6.45□□□□□ -1.38
USF3-201ENST00000316407 Q6ZVQ6 151 aa6.45□□□□□ -1.38
USF3-201ENST00000316407 KIR2DL5BQ8NHK3 375 aa6.45□□□□□ -1.38
USF3-201ENST00000316407 SMAD5-AS1Q9Y6J3 95 aa6.45□□□□□ -1.38
USF3-201ENST00000316407 ADAMTSL4-AS1Q5T5F5 129 aa6.45□□□□□ -1.38
USF3-201ENST00000316407 UBE2D4Q9Y2X8 147 aa6.44□□□□□ -1.38
USF3-201ENST00000316407 K7ENP7 123 aa6.44□□□□□ -1.38
USF3-201ENST00000316407 TSPEAR-AS2P59090 65 aa6.44□□□□□ -1.38
USF3-201ENST00000316407 UBE2D3P61077 147 aa6.44□□□□□ -1.38
USF3-201ENST00000316407 UBE2D2P62837 147 aa6.44□□□□□ -1.38
USF3-201ENST00000316407 CDIP1Q9H305 208 aa6.44□□□□□ -1.38
USF3-201ENST00000316407 USP9XQ93008 2570 aaPredicted RBP6.44□□□□□ -1.38
USF3-201ENST00000316407 A8MTW9 85 aa6.44□□□□□ -1.38
USF3-201ENST00000316407 IGLV1-47P01700 117 aa6.44□□□□□ -1.38
USF3-201ENST00000316407 Q8N814 137 aa6.44□□□□□ -1.38
USF3-201ENST00000316407 UBE2D1P51668 147 aa6.43□□□□□ -1.38
USF3-201ENST00000316407 IGHV6-1A0A0B4J1U7 121 aa6.43□□□□□ -1.38
USF3-201ENST00000316407 LY6LH3BQJ8 138 aa6.43□□□□□ -1.38
USF3-201ENST00000316407 TRBV7-7A0A0K0K1E9 115 aa6.43□□□□□ -1.38
USF3-201ENST00000316407 PYGO1Q9Y3Y4 419 aa6.43□□□□□ -1.38
USF3-201ENST00000316407 DHRS4-AS1Q9P1J3 65 aa6.43□□□□□ -1.38
USF3-201ENST00000316407 ZNF580Q9UK33 172 aa6.43□□□□□ -1.38
USF3-201ENST00000316407 K7EMT4 169 aa6.43□□□□□ -1.38
USF3-201ENST00000316407 C11orf21Q9P2W6 132 aa6.43□□□□□ -1.38
USF3-201ENST00000316407 MSMPQ1L6U9 139 aa6.42□□□□□ -1.38
USF3-201ENST00000316407 IGF2-ASQ6U949 168 aa6.42□□□□□ -1.38
USF3-201ENST00000316407 TMEM254Q8TBM7 123 aa6.42□□□□□ -1.38
USF3-201ENST00000316407 RNASE3P12724 160 aaKnown RBP6.42□□□□□ -1.38
USF3-201ENST00000316407 Q6ZSR3 168 aa6.42□□□□□ -1.38
USF3-201ENST00000316407 SBSPONQ8IVN8 264 aa6.42□□□□□ -1.38
USF3-201ENST00000316407 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.42□□□□□ -1.38
USF3-201ENST00000316407 COX6A2Q02221 97 aa6.41□□□□□ -1.38
USF3-201ENST00000316407 COL4A4P53420 1690 aaPredicted RBP6.41□□□□□ -1.38
USF3-201ENST00000316407 LINC00575Q6W349 94 aa6.41□□□□□ -1.38
USF3-201ENST00000316407 IGLV4-69A0A075B6H9 119 aa6.41□□□□□ -1.38
USF3-201ENST00000316407 BPTFQ12830 3046 aa6.41□□□□□ -1.38
USF3-201ENST00000316407 C11orf45Q8TAV5 145 aa6.41□□□□□ -1.38
USF3-201ENST00000316407 H0Y9P7 68 aa6.4□□□□□ -1.38
USF3-201ENST00000316407 C10orf99Q6UWK7 81 aa6.4□□□□□ -1.39
USF3-201ENST00000316407 USP24Q9UPU5 2620 aa6.4□□□□□ -1.39
USF3-201ENST00000316407 POLQO75417 2590 aa6.4□□□□□ -1.39
USF3-201ENST00000316407 TRBV10-3A0A0K0K1G6 114 aa6.4□□□□□ -1.39
USF3-201ENST00000316407 Q8N6K4 173 aa6.4□□□□□ -1.39
USF3-201ENST00000316407 LTBP2Q14767 1821 aa6.4□□□□□ -1.39
USF3-201ENST00000316407 M0R378 163 aa6.39□□□□□ -1.39
USF3-201ENST00000316407 A6NDX4 124 aa6.39□□□□□ -1.39
USF3-201ENST00000316407 SPAG11AQ6PDA7 123 aa6.39□□□□□ -1.39
USF3-201ENST00000316407 TNFRSF13BO14836 293 aaPredicted RBP6.39□□□□□ -1.39
USF3-201ENST00000316407 URB1-AS1Q96HZ7 61 aa6.39□□□□□ -1.39
USF3-201ENST00000316407 COX17Q14061 63 aa6.39□□□□□ -1.39
USF3-201ENST00000316407 C1orf137Q5JT78 98 aa6.39□□□□□ -1.39
USF3-201ENST00000316407 EIF4EBP1Q13541 118 aaPredicted RBP6.39□□□□□ -1.39
USF3-201ENST00000316407 C10orf25Q5T742 122 aa6.39□□□□□ -1.39
USF3-201ENST00000316407 MTORP42345 2549 aa6.39□□□□□ -1.39
USF3-201ENST00000316407 CRIP3Q6Q6R5 217 aa6.39□□□□□ -1.39
USF3-201ENST00000316407 BBC3Q96PG8 261 aaPredicted RBP6.38□□□□□ -1.39
USF3-201ENST00000316407 WISP2O76076 250 aa6.38□□□□□ -1.39
USF3-201ENST00000316407 CR1P17927 2039 aa6.38□□□□□ -1.39
USF3-201ENST00000316407 GOLGB1Q14789 3259 aaKnown RBP6.38□□□□□ -1.39
USF3-201ENST00000316407 C14orf177Q52M58 125 aa6.38□□□□□ -1.39
USF3-201ENST00000316407 CD164L2Q6UWJ8 174 aa6.38□□□□□ -1.39
USF3-201ENST00000316407 ODF3Q96PU9 254 aa6.38□□□□□ -1.39
USF3-201ENST00000316407 ANKRD11Q6UB99 2663 aaPredicted RBP6.38□□□□□ -1.39
USF3-201ENST00000316407 DEFB131BA0A096LNP1 70 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms