RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
TUBB3-201ENST00000315491 A6NJY4 79 aa11.16□□□□□ -0.62
TUBB3-201ENST00000315491 MT-ATP8P03928 68 aa11.16□□□□□ -0.62
TUBB3-201ENST00000315491 NUPR2A6NF83 97 aa11.16□□□□□ -0.62
TUBB3-201ENST00000315491 CHCHD7Q9BUK0 85 aa11.16□□□□□ -0.62
TUBB3-201ENST00000315491 TRBV6-8A0A0A6YYG3 113 aa11.15□□□□□ -0.62
TUBB3-201ENST00000315491 F8VRH5 84 aa11.14□□□□□ -0.63
TUBB3-201ENST00000315491 XGP55808 180 aa11.14□□□□□ -0.63
TUBB3-201ENST00000315491 NFE4Q86UQ8 179 aa11.14□□□□□ -0.63
TUBB3-201ENST00000315491 UBE2D1P51668 147 aa11.13□□□□□ -0.63
TUBB3-201ENST00000315491 LYPD5Q6UWN5 251 aa11.13□□□□□ -0.63
TUBB3-201ENST00000315491 C20orf203Q8NBC4 194 aa11.13□□□□□ -0.63
TUBB3-201ENST00000315491 PGPEP1Q9NXJ5 209 aa11.13□□□□□ -0.63
TUBB3-201ENST00000315491 KLK5Q9Y337 293 aaPredicted RBP11.13□□□□□ -0.63
TUBB3-201ENST00000315491 TIRAPP58753 221 aa11.13□□□□□ -0.63
TUBB3-201ENST00000315491 C2orf66Q6UXQ4 117 aa11.13□□□□□ -0.63
TUBB3-201ENST00000315491 TEN1Q86WV5 123 aa11.13□□□□□ -0.63
TUBB3-201ENST00000315491 WWC2-AS2Q96NR7 200 aa11.13□□□□□ -0.63
TUBB3-201ENST00000315491 TMEM243Q9BU79 118 aa11.13□□□□□ -0.63
TUBB3-201ENST00000315491 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.12□□□□□ -0.63
TUBB3-201ENST00000315491 IGKV2-29A2NJV5 120 aaPredicted RBP11.12□□□□□ -0.63
TUBB3-201ENST00000315491 TMEM262E9PQX1 116 aa11.12□□□□□ -0.63
TUBB3-201ENST00000315491 CARD19Q96LW7 228 aa11.12□□□□□ -0.63
TUBB3-201ENST00000315491 DYNC2H1Q8NCM8 4307 aaKnown RBP11.12□□□□□ -0.63
TUBB3-201ENST00000315491 RPL39P62891 51 aaKnown RBP11.11□□□□□ -0.63
TUBB3-201ENST00000315491 GAGE6Q13070 117 aa11.11□□□□□ -0.63
TUBB3-201ENST00000315491 LELP1Q5T871 98 aa11.11□□□□□ -0.63
TUBB3-201ENST00000315491 TOMM6Q96B49 74 aa11.11□□□□□ -0.63
TUBB3-201ENST00000315491 DNAH7Q8WXX0 4024 aa11.11□□□□□ -0.63
TUBB3-201ENST00000315491 M0QXV9 152 aa11.11□□□□□ -0.63
TUBB3-201ENST00000315491 ESRGQ1W209 222 aa11.11□□□□□ -0.63
TUBB3-201ENST00000315491 MUC7Q8TAX7 377 aa11.11□□□□□ -0.63
TUBB3-201ENST00000315491 APLNQ9ULZ1 77 aa11.11□□□□□ -0.63
TUBB3-201ENST00000315491 TRBV20-1A0A075B6N2 111 aa11.1□□□□□ -0.63
TUBB3-201ENST00000315491 ZFAND6Q6FIF0 208 aa11.1□□□□□ -0.63
TUBB3-201ENST00000315491 CHCHD5Q9BSY4 110 aa11.1□□□□□ -0.63
TUBB3-201ENST00000315491 LINC01549A6NIU2 74 aa11.09□□□□□ -0.63
TUBB3-201ENST00000315491 UBE2L6O14933 153 aa11.09□□□□□ -0.63
TUBB3-201ENST00000315491 PSMB2P49721 201 aa11.09□□□□□ -0.63
TUBB3-201ENST00000315491 ANAPC13Q9BS18 74 aa11.09□□□□□ -0.63
TUBB3-201ENST00000315491 H7C423 109 aa11.08□□□□□ -0.64
TUBB3-201ENST00000315491 SCGB3A1Q96QR1 104 aa11.08□□□□□ -0.64
TUBB3-201ENST00000315491 UBE2D4Q9Y2X8 147 aa11.07□□□□□ -0.64
TUBB3-201ENST00000315491 CCL18P55774 89 aa11.06□□□□□ -0.64
TUBB3-201ENST00000315491 CFAP161Q6P656 301 aa11.06□□□□□ -0.64
TUBB3-201ENST00000315491 PRSS29PA6NIE9 313 aa11.05□□□□□ -0.64
TUBB3-201ENST00000315491 IGIPA6NJ69 53 aa11.05□□□□□ -0.64
TUBB3-201ENST00000315491 TIMM17AQ99595 171 aa11.05□□□□□ -0.64
TUBB3-201ENST00000315491 TIMM21Q9BVV7 248 aa11.05□□□□□ -0.64
TUBB3-201ENST00000315491 SPANXA1Q9NS26 97 aa11.05□□□□□ -0.64
TUBB3-201ENST00000315491 PYGO1Q9Y3Y4 419 aa11.05□□□□□ -0.64
TUBB3-201ENST00000315491 SS18L2Q9UHA2 77 aa11.05□□□□□ -0.64
TUBB3-201ENST00000315491 LINC00588Q9Y4M8 146 aa11.05□□□□□ -0.64
TUBB3-201ENST00000315491 LOC107984156A0A0G2JMH3 177 aa11.04□□□□□ -0.64
TUBB3-201ENST00000315491 ARL17AQ8IVW1 177 aa11.04□□□□□ -0.64
TUBB3-201ENST00000315491 TMEM141Q96I45 108 aa11.04□□□□□ -0.64
TUBB3-201ENST00000315491 ZNF815PA8K554 130 aa11.03□□□□□ -0.64
TUBB3-201ENST00000315491 DGAT2L7PQ6IED9 249 aa11.03□□□□□ -0.64
TUBB3-201ENST00000315491 Q6Q795 121 aa11.03□□□□□ -0.64
TUBB3-201ENST00000315491 TCL1BO95988 128 aa11.03□□□□□ -0.64
TUBB3-201ENST00000315491 WFDC10BQ8IUB3 73 aa11.03□□□□□ -0.64
TUBB3-201ENST00000315491 TMEM101Q96IK0 257 aa11.03□□□□□ -0.64
TUBB3-201ENST00000315491 OPRPNQ99935 248 aaPredicted RBP11.03□□□□□ -0.64
TUBB3-201ENST00000315491 CSDC2Q9Y534 153 aaKnown RBP11.03□□□□□ -0.64
TUBB3-201ENST00000315491 STARD9Q9P2P6 4700 aa11.02□□□□□ -0.65
TUBB3-201ENST00000315491 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.65
TUBB3-201ENST00000315491 ANKRD29Q8N6D5 301 aa11.02□□□□□ -0.65
TUBB3-201ENST00000315491 LINC01600Q96MT4 127 aa11.02□□□□□ -0.65
TUBB3-201ENST00000315491 SRSF9Q13242 221 aaKnown RBP eCLIP11.01□□□□□ -0.65
TUBB3-201ENST00000315491 PLECQ15149 4684 aaKnown RBP11.01□□□□□ -0.65
TUBB3-201ENST00000315491 PLEKHB2Q96CS7 222 aa11.01□□□□□ -0.65
TUBB3-201ENST00000315491 IGLV4-60A0A075B6I1 120 aa11□□□□□ -0.65
TUBB3-201ENST00000315491 A0A1B0GUV1 79 aa11□□□□□ -0.65
TUBB3-201ENST00000315491 MRPS36P82909 103 aaKnown RBP11□□□□□ -0.65
TUBB3-201ENST00000315491 PAPPA-AS1Q5QFB9 102 aa11□□□□□ -0.65
TUBB3-201ENST00000315491 SCGB1D4Q6XE38 83 aa11□□□□□ -0.65
TUBB3-201ENST00000315491 BAALCQ8WXS3 180 aa11□□□□□ -0.65
TUBB3-201ENST00000315491 FAM104AQ969W3 186 aa11□□□□□ -0.65
TUBB3-201ENST00000315491 UPK3BQ9BT76 320 aa11□□□□□ -0.65
TUBB3-201ENST00000315491 UBE2DNLQ8IWF7 75 aa11□□□□□ -0.65
TUBB3-201ENST00000315491 CDC42SE2Q9NRR3 84 aa11□□□□□ -0.65
TUBB3-201ENST00000315491 C3orf84H3BNL1 204 aa10.99□□□□□ -0.65
TUBB3-201ENST00000315491 HERVK_113P61574 105 aa10.99□□□□□ -0.65
TUBB3-201ENST00000315491 Q8N3U1 123 aa10.99□□□□□ -0.65
TUBB3-201ENST00000315491 C10orf126Q8N4M7 172 aa10.99□□□□□ -0.65
TUBB3-201ENST00000315491 CSMD3Q7Z407 3707 aa10.99□□□□□ -0.65
TUBB3-201ENST00000315491 RNASE13Q5GAN3 156 aaKnown RBP10.98□□□□□ -0.65
TUBB3-201ENST00000315491 CASC10Q5T4H9 136 aa10.98□□□□□ -0.65
TUBB3-201ENST00000315491 IGHV3-30P01768 117 aa10.98□□□□□ -0.65
TUBB3-201ENST00000315491 IGHV3-33P01772 117 aa10.98□□□□□ -0.65
TUBB3-201ENST00000315491 SCGB1C2P0DMR2 95 aa10.98□□□□□ -0.65
TUBB3-201ENST00000315491 IGHV3-30-3P0DP02 117 aa10.98□□□□□ -0.65
TUBB3-201ENST00000315491 IGHV3-30-5P0DP03 117 aa10.98□□□□□ -0.65
TUBB3-201ENST00000315491 NDUFV3P56181 108 aaKnown RBP10.98□□□□□ -0.65
TUBB3-201ENST00000315491 GAGE2BQ13066 116 aa10.98□□□□□ -0.65
TUBB3-201ENST00000315491 GAGE2EQ4V326 116 aa10.98□□□□□ -0.65
TUBB3-201ENST00000315491 GAGE2DQ9UEU5 116 aa10.98□□□□□ -0.65
TUBB3-201ENST00000315491 TGP01266 2768 aa10.97□□□□□ -0.65
TUBB3-201ENST00000315491 B5MCH6 92 aa10.97□□□□□ -0.65
TUBB3-201ENST00000315491 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms