RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CDC42SE2Q9NRR3 84 aa10.02□□□□□ -0.81
CLCN6-201ENST00000312413 ADAMTS9Q9P2N4 1935 aa10.02□□□□□ -0.81
CLCN6-201ENST00000312413 A0A087WVE0 104 aa10.01□□□□□ -0.81
CLCN6-201ENST00000312413 LELP1Q5T871 98 aa10.01□□□□□ -0.81
CLCN6-201ENST00000312413 Q6ZSV7 163 aa10.01□□□□□ -0.81
CLCN6-201ENST00000312413 OTOGLQ3ZCN5 2332 aa10.01□□□□□ -0.81
CLCN6-201ENST00000312413 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
CLCN6-201ENST00000312413 CRIP2P52943 208 aaPredicted RBP10.01□□□□□ -0.81
CLCN6-201ENST00000312413 UBE2D3P61077 147 aa10□□□□□ -0.81
CLCN6-201ENST00000312413 UBE2D2P62837 147 aa10□□□□□ -0.81
CLCN6-201ENST00000312413 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
CLCN6-201ENST00000312413 KIAA1549Q9HCM3 1950 aa10□□□□□ -0.81
CLCN6-201ENST00000312413 MRGPRG-AS1Q2M3A8 158 aa10□□□□□ -0.81
CLCN6-201ENST00000312413 LINC00242Q5T6M2 205 aa10□□□□□ -0.81
CLCN6-201ENST00000312413 RPL28P46779 137 aaKnown RBP9.99□□□□□ -0.81
CLCN6-201ENST00000312413 CUL9Q8IWT3 2517 aa9.99□□□□□ -0.81
CLCN6-201ENST00000312413 C19orf84I3L1E1 186 aa9.99□□□□□ -0.81
CLCN6-201ENST00000312413 PRO3102Q9H379 93 aa9.99□□□□□ -0.81
CLCN6-201ENST00000312413 DOPEY1Q5JWR5 2465 aa9.98□□□□□ -0.81
CLCN6-201ENST00000312413 RPL37AP8A6NKH3 93 aa9.98□□□□□ -0.81
CLCN6-201ENST00000312413 Q8N814 137 aa9.98□□□□□ -0.81
CLCN6-201ENST00000312413 PSMG3-AS1Q96PY0 264 aa9.98□□□□□ -0.81
CLCN6-201ENST00000312413 TANC2Q9HCD6 1990 aa9.97□□□□□ -0.81
CLCN6-201ENST00000312413 CYSRT1A8MQ03 144 aa9.97□□□□□ -0.81
CLCN6-201ENST00000312413 PRM2P04554 102 aa9.97□□□□□ -0.81
CLCN6-201ENST00000312413 WFDC10AQ9H1F0 79 aa9.97□□□□□ -0.81
CLCN6-201ENST00000312413 LINC00208Q96KT6 92 aa9.97□□□□□ -0.81
CLCN6-201ENST00000312413 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.81
CLCN6-201ENST00000312413 KPRPQ5T749 579 aaPredicted RBP9.96□□□□□ -0.81
CLCN6-201ENST00000312413 RETNQ9HD89 108 aa9.96□□□□□ -0.81
CLCN6-201ENST00000312413 SMIM1B2RUZ4 78 aa9.96□□□□□ -0.81
CLCN6-201ENST00000312413 C7orf33Q8WU49 177 aa9.96□□□□□ -0.81
CLCN6-201ENST00000312413 ARHGAP32A7KAX9 2087 aa9.96□□□□□ -0.82
CLCN6-201ENST00000312413 TRAV10A0A0B4J240 114 aa9.96□□□□□ -0.82
CLCN6-201ENST00000312413 C11orf71Q6IPW1 123 aa9.96□□□□□ -0.82
CLCN6-201ENST00000312413 ALPK3Q96L96 1907 aa9.96□□□□□ -0.82
CLCN6-201ENST00000312413 PRYO14603 147 aa9.96□□□□□ -0.82
CLCN6-201ENST00000312413 NAV3Q8IVL0 2385 aa9.95□□□□□ -0.82
CLCN6-201ENST00000312413 TECTAO75443 2155 aa9.95□□□□□ -0.82
CLCN6-201ENST00000312413 KIF26AQ9ULI4 1882 aaPredicted RBP9.95□□□□□ -0.82
CLCN6-201ENST00000312413 TSPEAR-AS2P59090 65 aa9.95□□□□□ -0.82
CLCN6-201ENST00000312413 ZNF702PQ9H963 129 aa9.95□□□□□ -0.82
CLCN6-201ENST00000312413 LTBP2Q14767 1821 aa9.94□□□□□ -0.82
CLCN6-201ENST00000312413 IGLV1-40P01703 118 aa9.94□□□□□ -0.82
CLCN6-201ENST00000312413 Q8N3U1 123 aa9.94□□□□□ -0.82
CLCN6-201ENST00000312413 A0A087WYN8 130 aa9.93□□□□□ -0.82
CLCN6-201ENST00000312413 NANOS2P60321 138 aaKnown RBP9.93□□□□□ -0.82
CLCN6-201ENST00000312413 C1orf137Q5JT78 98 aa9.93□□□□□ -0.82
CLCN6-201ENST00000312413 IGLV9-49A0A0B4J1Y8 123 aa9.92□□□□□ -0.82
CLCN6-201ENST00000312413 ZNF106Q9H2Y7 1883 aaKnown RBP9.92□□□□□ -0.82
CLCN6-201ENST00000312413 UNQ6190/PRO20217Q6UXQ8 127 aa9.92□□□□□ -0.82
CLCN6-201ENST00000312413 HCFC1P51610 2035 aa9.92□□□□□ -0.82
CLCN6-201ENST00000312413 PCNX3Q9H6A9 2034 aa9.91□□□□□ -0.82
CLCN6-201ENST00000312413 TRBV10-3A0A0K0K1G6 114 aa9.91□□□□□ -0.82
CLCN6-201ENST00000312413 TMEM131Q92545 1883 aa9.91□□□□□ -0.82
CLCN6-201ENST00000312413 ADAMTSL4-AS1Q5T5F5 129 aa9.91□□□□□ -0.82
CLCN6-201ENST00000312413 HIVEP3Q5T1R4 2406 aa9.91□□□□□ -0.82
CLCN6-201ENST00000312413 PLAC8L1A1L4L8 177 aa9.91□□□□□ -0.82
CLCN6-201ENST00000312413 EGFEM1PQ0D2K5 195 aa9.91□□□□□ -0.82
CLCN6-201ENST00000312413 Q6ZVQ6 151 aa9.9□□□□□ -0.82
CLCN6-201ENST00000312413 TRBV7-7A0A0K0K1E9 115 aa9.9□□□□□ -0.82
CLCN6-201ENST00000312413 C10orf25Q5T742 122 aa9.9□□□□□ -0.82
CLCN6-201ENST00000312413 CHCHD7Q9BUK0 85 aa9.9□□□□□ -0.82
CLCN6-201ENST00000312413 PRRC2AP48634 2157 aaKnown RBP9.9□□□□□ -0.82
CLCN6-201ENST00000312413 A0A096LNJ9 63 aa9.89□□□□□ -0.83
CLCN6-201ENST00000312413 C18orf65Q6ZTR6 163 aa9.89□□□□□ -0.83
CLCN6-201ENST00000312413 COX6A2Q02221 97 aa9.89□□□□□ -0.83
CLCN6-201ENST00000312413 DSCAMO60469 2012 aa9.89□□□□□ -0.83
CLCN6-201ENST00000312413 C2orf16Q68DN1 1984 aa9.88□□□□□ -0.83
CLCN6-201ENST00000312413 ZNF843Q8N446 348 aa9.88□□□□□ -0.83
CLCN6-201ENST00000312413 TRBV7-6A0A0J9YX20 115 aa9.88□□□□□ -0.83
CLCN6-201ENST00000312413 PSPHP1O15172 72 aa9.88□□□□□ -0.83
CLCN6-201ENST00000312413 NAV2Q8IVL1 2488 aa9.88□□□□□ -0.83
CLCN6-201ENST00000312413 ESRGQ1W209 222 aa9.88□□□□□ -0.83
CLCN6-201ENST00000312413 C9orf116Q5BN46 136 aaPredicted RBP9.88□□□□□ -0.83
CLCN6-201ENST00000312413 AMELXQ99217 191 aa9.88□□□□□ -0.83
CLCN6-201ENST00000312413 PCDH15Q96QU1 1955 aa9.88□□□□□ -0.83
CLCN6-201ENST00000312413 LINC01006Q8NI28 216 aa9.88□□□□□ -0.83
CLCN6-201ENST00000312413 LINC01547P58512 204 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-201ENST00000312413 PRR3P79522 188 aaKnown RBP9.87□□□□□ -0.83
CLCN6-201ENST00000312413 IGLV2-18A0A075B6J9 118 aa9.86□□□□□ -0.83
CLCN6-201ENST00000312413 PRORYQ9H606 182 aa9.86□□□□□ -0.83
CLCN6-201ENST00000312413 LINC00474Q9P2X8 69 aa9.86□□□□□ -0.83
CLCN6-201ENST00000312413 INAFM1C9JVW0 142 aa9.86□□□□□ -0.83
CLCN6-201ENST00000312413 COX8CQ7Z4L0 72 aa9.86□□□□□ -0.83
CLCN6-201ENST00000312413 SHISA2Q6UWI4 295 aa9.86□□□□□ -0.83
CLCN6-201ENST00000312413 ZNF580Q9UK33 172 aa9.86□□□□□ -0.83
CLCN6-201ENST00000312413 TMEM254Q8TBM7 123 aa9.86□□□□□ -0.83
CLCN6-201ENST00000312413 CSDC2Q9Y534 153 aaKnown RBP9.86□□□□□ -0.83
CLCN6-201ENST00000312413 LINC00575Q6W349 94 aa9.85□□□□□ -0.83
CLCN6-201ENST00000312413 MYO9AB2RTY4 2548 aa9.84□□□□□ -0.83
CLCN6-201ENST00000312413 CCDC168Q8NDH2 2452 aa9.84□□□□□ -0.83
CLCN6-201ENST00000312413 IGLV4-60A0A075B6I1 120 aa9.84□□□□□ -0.83
CLCN6-201ENST00000312413 LINC00846Q9NV44 126 aa9.84□□□□□ -0.83
CLCN6-201ENST00000312413 BEAN1Q3B7T3 259 aa9.84□□□□□ -0.84
CLCN6-201ENST00000312413 ABCA2Q9BZC7 2435 aa9.83□□□□□ -0.84
CLCN6-201ENST00000312413 ODF3L2Q3SX64 289 aa9.83□□□□□ -0.84
CLCN6-201ENST00000312413 KIAA1549LQ6ZVL6 1849 aa9.83□□□□□ -0.84
CLCN6-201ENST00000312413 CDIP1Q9H305 208 aa9.83□□□□□ -0.84
CLCN6-201ENST00000312413 REG3GQ6UW15 175 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms