RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TMEM89A2RUT3 159 aa8.04□□□□□ -1.12
PTPN7-201ENST00000309017 TRACP01848 142 aa8.03□□□□□ -1.12
PTPN7-201ENST00000309017 STHQ8IWL8 128 aa8.03□□□□□ -1.12
PTPN7-201ENST00000309017 SMCR5Q8TEV8 140 aa8.03□□□□□ -1.12
PTPN7-201ENST00000309017 IMUPQ9GZP8 106 aa8.03□□□□□ -1.12
PTPN7-201ENST00000309017 MAP6D1Q9H9H5 199 aa8.03□□□□□ -1.12
PTPN7-201ENST00000309017 VPREB3Q9UKI3 123 aa8.02□□□□□ -1.13
PTPN7-201ENST00000309017 NBEAL1Q6ZS30 2694 aa8.02□□□□□ -1.13
PTPN7-201ENST00000309017 TRAV13-2A0A0B4J235 113 aa8.02□□□□□ -1.13
PTPN7-201ENST00000309017 MIR7-3HGQ8N6C7 128 aa8.02□□□□□ -1.13
PTPN7-201ENST00000309017 ZNF469Q96JG9 3925 aaPredicted RBP8.02□□□□□ -1.13
PTPN7-201ENST00000309017 C11orf44Q8N8P7 122 aa8.01□□□□□ -1.13
PTPN7-201ENST00000309017 FAM218AQ96MZ4 157 aa8.01□□□□□ -1.13
PTPN7-201ENST00000309017 C3orf22Q8N5N4 141 aa8.01□□□□□ -1.13
PTPN7-201ENST00000309017 SND1-IT1Q9HBX3 110 aa8.01□□□□□ -1.13
PTPN7-201ENST00000309017 IGLV5-45A0A087WSX0 123 aa8.01□□□□□ -1.13
PTPN7-201ENST00000309017 IGLV5-39A0A0G2JS06 123 aa8.01□□□□□ -1.13
PTPN7-201ENST00000309017 MALP21145 153 aa8.01□□□□□ -1.13
PTPN7-201ENST00000309017 PFN2P35080 140 aa8.01□□□□□ -1.13
PTPN7-201ENST00000309017 LINC01356Q8N9X3 169 aa8.01□□□□□ -1.13
PTPN7-201ENST00000309017 C11orf68Q9H3H3 251 aaKnown RBP8.01□□□□□ -1.13
PTPN7-201ENST00000309017 UTP20O75691 2785 aaKnown RBP8.01□□□□□ -1.13
PTPN7-201ENST00000309017 TRGV2A0A075B6R0 118 aa8□□□□□ -1.13
PTPN7-201ENST00000309017 IGKV3D-7A0A0C4DH55 119 aa8□□□□□ -1.13
PTPN7-201ENST00000309017 C14orf132Q9NPU4 83 aa8□□□□□ -1.13
PTPN7-201ENST00000309017 K7EQD1 137 aa8□□□□□ -1.13
PTPN7-201ENST00000309017 UQCRQO14949 82 aa8□□□□□ -1.13
PTPN7-201ENST00000309017 PAX4O43316 350 aa8□□□□□ -1.13
PTPN7-201ENST00000309017 Q6ZTI0 123 aa8□□□□□ -1.13
PTPN7-201ENST00000309017 C11orf72Q8NBR9 251 aa8□□□□□ -1.13
PTPN7-201ENST00000309017 ATP5G1P05496 136 aa7.99□□□□□ -1.13
PTPN7-201ENST00000309017 SDIM1Q6ZPB5 146 aa7.99□□□□□ -1.13
PTPN7-201ENST00000309017 TMEM243Q9BU79 118 aa7.99□□□□□ -1.13
PTPN7-201ENST00000309017 A0A1W2PRX2 142 aa7.99□□□□□ -1.13
PTPN7-201ENST00000309017 KLK5Q9Y337 293 aaPredicted RBP7.99□□□□□ -1.13
PTPN7-201ENST00000309017 RNF152Q8N8N0 203 aa7.98□□□□□ -1.13
PTPN7-201ENST00000309017 PPDPFQ9H3Y8 114 aa7.98□□□□□ -1.13
PTPN7-201ENST00000309017 NOP10Q9NPE3 64 aaKnown RBP7.98□□□□□ -1.13
PTPN7-201ENST00000309017 ZANQ9Y493 2812 aa7.98□□□□□ -1.13
PTPN7-201ENST00000309017 COX7B2Q8TF08 81 aa7.98□□□□□ -1.13
PTPN7-201ENST00000309017 ZNF702PQ9H963 129 aa7.98□□□□□ -1.13
PTPN7-201ENST00000309017 BEAN1Q3B7T3 259 aa7.97□□□□□ -1.13
PTPN7-201ENST00000309017 CDC42SE2Q9NRR3 84 aa7.97□□□□□ -1.13
PTPN7-201ENST00000309017 ANKRD17O75179 2603 aaKnown RBP7.97□□□□□ -1.13
PTPN7-201ENST00000309017 LECT2O14960 151 aa7.97□□□□□ -1.13
PTPN7-201ENST00000309017 ITPR1Q14643 2758 aa7.97□□□□□ -1.13
PTPN7-201ENST00000309017 CFAP161Q6P656 301 aa7.96□□□□□ -1.13
PTPN7-201ENST00000309017 NTM-AS1Q6ZSK4 140 aa7.96□□□□□ -1.13
PTPN7-201ENST00000309017 OVOL2Q9BRP0 275 aa7.96□□□□□ -1.13
PTPN7-201ENST00000309017 PRORYQ9H606 182 aa7.96□□□□□ -1.13
PTPN7-201ENST00000309017 C5orf38Q86SI9 138 aa7.96□□□□□ -1.14
PTPN7-201ENST00000309017 LINC00337Q8N6G1 96 aa7.96□□□□□ -1.14
PTPN7-201ENST00000309017 TRGV4A0A0C4DH28 118 aa7.96□□□□□ -1.14
PTPN7-201ENST00000309017 A0A087WYN8 130 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 RNASE1P07998 156 aaKnown RBP7.95□□□□□ -1.14
PTPN7-201ENST00000309017 SMIM11BQ8TCY0 68 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 STAB1Q9NY15 2570 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 TRBV10-1A0A0K0K1A3 114 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 A0A1B0GX51 115 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 PF4P02776 101 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 HIST1H4AP62805 103 aaKnown RBP7.95□□□□□ -1.14
PTPN7-201ENST00000309017 DEFB114Q30KQ6 69 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 hADV29S1A0JD25 119 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 ATOX1O00244 68 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 SLPIP03973 132 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 FAM222AQ5U5X8 452 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 Q96MF0 132 aa7.95□□□□□ -1.14
PTPN7-201ENST00000309017 UBR5O95071 2799 aaPredicted RBP7.95□□□□□ -1.14
PTPN7-201ENST00000309017 COX7CP15954 63 aa7.94□□□□□ -1.14
PTPN7-201ENST00000309017 RPL28P46779 137 aaKnown RBP7.94□□□□□ -1.14
PTPN7-201ENST00000309017 LINC00526Q96FQ7 95 aa7.94□□□□□ -1.14
PTPN7-201ENST00000309017 LOC100131303A0A0U1RQF7 123 aa7.94□□□□□ -1.14
PTPN7-201ENST00000309017 LOC107984640A0A0U1RRK4 108 aa7.94□□□□□ -1.14
PTPN7-201ENST00000309017 DSCR9P59020 149 aa7.94□□□□□ -1.14
PTPN7-201ENST00000309017 F5H768 121 aa7.94□□□□□ -1.14
PTPN7-201ENST00000309017 NCR3O14931 201 aa7.94□□□□□ -1.14
PTPN7-201ENST00000309017 CXCL5P42830 114 aa7.93□□□□□ -1.14
PTPN7-201ENST00000309017 C6orf226Q5I0X4 101 aa7.93□□□□□ -1.14
PTPN7-201ENST00000309017 C1orf158Q8N1D5 194 aa7.93□□□□□ -1.14
PTPN7-201ENST00000309017 H0YGX0 51 aa7.93□□□□□ -1.14
PTPN7-201ENST00000309017 RPL35AP18077 110 aaKnown RBP7.93□□□□□ -1.14
PTPN7-201ENST00000309017 CSDC2Q9Y534 153 aaKnown RBP7.93□□□□□ -1.14
PTPN7-201ENST00000309017 ODF3L2Q3SX64 289 aa7.92□□□□□ -1.14
PTPN7-201ENST00000309017 A0A087WVE0 104 aa7.92□□□□□ -1.14
PTPN7-201ENST00000309017 CCL18P55774 89 aa7.92□□□□□ -1.14
PTPN7-201ENST00000309017 Q6YL49 198 aa7.92□□□□□ -1.14
PTPN7-201ENST00000309017 J3QLI3 93 aa7.92□□□□□ -1.14
PTPN7-201ENST00000309017 A8MTW9 85 aa7.91□□□□□ -1.14
PTPN7-201ENST00000309017 J3KT08 172 aa7.91□□□□□ -1.14
PTPN7-201ENST00000309017 IGKV2-28A0A075B6P5 120 aa7.91□□□□□ -1.14
PTPN7-201ENST00000309017 IGKV2D-28P01615 120 aa7.91□□□□□ -1.14
PTPN7-201ENST00000309017 C4orf3Q8WVX3 66 aa7.91□□□□□ -1.14
PTPN7-201ENST00000309017 C9orf129Q5T035 196 aaKnown RBP7.9□□□□□ -1.14
PTPN7-201ENST00000309017 LINC00846Q9NV44 126 aa7.9□□□□□ -1.14
PTPN7-201ENST00000309017 RPL18AQ02543 176 aaKnown RBP7.9□□□□□ -1.15
PTPN7-201ENST00000309017 LRRC75A-AS1Q8N1F1 130 aa7.9□□□□□ -1.15
PTPN7-201ENST00000309017 ITPR2Q14571 2701 aa7.9□□□□□ -1.15
PTPN7-201ENST00000309017 CLPSL2Q6UWE3 100 aa7.89□□□□□ -1.15
PTPN7-201ENST00000309017 ORMDL1Q9P0S3 153 aa7.89□□□□□ -1.15
PTPN7-201ENST00000309017 XCL1P47992 114 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms