RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 PYGO1Q9Y3Y4 419 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 HSPG2P98160 4391 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 A0A0B4J2C4 111 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 IGHV3-16A0A0C4DH30 117 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 A8MTW9 85 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 J3QQQ9 107 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 IGHV3-30P01768 117 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 P0DMU3 169 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 FAM231AP0DMU4 169 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 FAM231CP0DMU5 169 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 IGHV3-30-5P0DP03 117 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 LGALS3P17931 250 aaKnown RBP3.52□□□□□ -1.85
CKS1B-201ENST00000308987 PSMB8P28062 276 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 SNRPD3P62318 126 aaKnown RBP3.52□□□□□ -1.85
CKS1B-201ENST00000308987 AMELXQ99217 191 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 TM2D3Q9BRN9 247 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 GTSF1LQ9H1H1 148 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 ABCA13Q86UQ4 5058 aa3.52□□□□□ -1.85
CKS1B-201ENST00000308987 IGHV1OR15-1A0A075B7D0 117 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 TRAV2A0A0B4J234 112 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 LOC107984156A0A0G2JMH3 177 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 TMEM223A0PJW6 202 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 A8MWV9 139 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 I3L3M4 83 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 K7EQG2 157 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 M0QY20 66 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 TRBV12-3P01733 135 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 CFC1BP0CG36 223 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 CFC1P0CG37 223 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 SMAGPQ0VAQ4 97 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 AMTNQ6UX39 209 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 ARL17AQ8IVW1 177 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 C20orf203Q8NBC4 194 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 C4orf3Q8WVX3 66 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 LRP1BQ9NZR2 4599 aa3.51□□□□□ -1.85
CKS1B-201ENST00000308987 A0A0J9YXY3 114 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 TRBV30A0A0K0K1B3 111 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 F6UB75 175 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 J3KRW8 73 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 M0R2P5 195 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 RHODO00212 210 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 TCL1BO95988 128 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 IGHV3-33P01772 117 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 ZNF688P0C7X2 276 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 PSMB2P49721 201 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 TMEM170BQ5T4T1 132 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 ZNRF2Q8NHG8 242 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 MPLKIPQ8TAP9 179 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 TMEM263Q8WUH6 116 aaKnown RBP3.5□□□□□ -1.85
CKS1B-201ENST00000308987 LINC00467Q9BRT7 94 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 SPANXA1Q9NS26 97 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 ERG28Q9UKR5 140 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 SELENOKQ9Y6D0 94 aa3.5□□□□□ -1.85
CKS1B-201ENST00000308987 APOBP04114 4563 aaKnown RBP3.49□□□□□ -1.85
CKS1B-201ENST00000308987 IGLV4-3A0A075B6K6 122 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 TRAV12-3A0A0B4J271 114 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 TIMM17BO60830 172 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 IGHV3-11P01762 117 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 SCGB1C2P0DMR2 95 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 IGHV4-30-4P0DP06 118 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 IFITM1P13164 125 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 ZNF22P17026 224 aaPredicted RBP3.49□□□□□ -1.85
CKS1B-201ENST00000308987 INSL3P51460 131 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 TSPEAR-AS2P59090 65 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 CKS1BP61024 79 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 RPL39P62891 51 aaKnown RBP3.49□□□□□ -1.85
CKS1B-201ENST00000308987 MRPS36P82909 103 aaKnown RBP3.49□□□□□ -1.85
CKS1B-201ENST00000308987 ATXN8Q156A1 80 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 ZNF56Q15929 161 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 MRPL23Q16540 153 aaKnown RBP3.49□□□□□ -1.85
CKS1B-201ENST00000308987 Q6ZUT4 128 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 DNAJC30Q96LL9 226 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 UBE2E2Q96LR5 201 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 CARD19Q96LW7 228 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 SPANXDQ9BXN6 97 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 JPT2Q9H910 190 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 SPANXCQ9NY87 97 aa3.49□□□□□ -1.85
CKS1B-201ENST00000308987 A0A087WWL8 130 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 TINCRA0A1B0GVN0 87 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 A4D1N5 150 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 SPRY2O43597 315 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 SLC25A20O43772 301 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 SPINK8P0C7L1 97 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 RPL13AP40429 203 aaKnown RBP3.48□□□□□ -1.85
CKS1B-201ENST00000308987 DEFB1P60022 68 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 Q6Q795 121 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 SPXQ9BT56 116 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 TIMM21Q9BVV7 248 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 PPDPFQ9H3Y8 114 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 RETNQ9HD89 108 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 DNAH5Q8TE73 4624 aa3.48□□□□□ -1.85
CKS1B-201ENST00000308987 IGHV1-58A0A0C4DH39 117 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 A0A0J9YXV3 536 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 TRBV10-2A0A0K0K1G8 114 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 A8MZ25 164 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 H3BT86 120 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 IGKV3-20P01619 116 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 IGLV1-51P01701 117 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 COX6CP09669 75 aa3.47□□□□□ -1.85
CKS1B-201ENST00000308987 IGHV3-30-3P0DP02 117 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms