RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 FAM19A1Q7Z5A9 133 aa11.36□□□□□ -0.59
LEMD3-201ENST00000308330 GPHB5Q86YW7 130 aa11.36□□□□□ -0.59
LEMD3-201ENST00000308330 TMEM254Q8TBM7 123 aa11.36□□□□□ -0.59
LEMD3-201ENST00000308330 ANKRD17O75179 2603 aaKnown RBP11.35□□□□□ -0.59
LEMD3-201ENST00000308330 CRIP1P50238 77 aa11.35□□□□□ -0.59
LEMD3-201ENST00000308330 LINC00846Q9NV44 126 aa11.35□□□□□ -0.59
LEMD3-201ENST00000308330 SMAD5-AS1Q9Y6J3 95 aa11.35□□□□□ -0.59
LEMD3-201ENST00000308330 ZNF80P51504 273 aaPredicted RBP11.35□□□□□ -0.59
LEMD3-201ENST00000308330 LINC00574Q9H8X3 128 aa11.35□□□□□ -0.59
LEMD3-201ENST00000308330 A0A0J9YX75 114 aa11.33□□□□□ -0.59
LEMD3-201ENST00000308330 ZFAND3Q9H8U3 227 aa11.33□□□□□ -0.6
LEMD3-201ENST00000308330 Q6ZSV7 163 aa11.33□□□□□ -0.6
LEMD3-201ENST00000308330 H3BS24 57 aa11.33□□□□□ -0.6
LEMD3-201ENST00000308330 K7EMT4 169 aa11.33□□□□□ -0.6
LEMD3-201ENST00000308330 UNQ9165/PRO28630Q6UXU0 137 aa11.33□□□□□ -0.6
LEMD3-201ENST00000308330 CASC2Q6XLA1 102 aa11.33□□□□□ -0.6
LEMD3-201ENST00000308330 C4orf3Q8WVX3 66 aa11.33□□□□□ -0.6
LEMD3-201ENST00000308330 TRBV10-1A0A0K0K1A3 114 aa11.32□□□□□ -0.6
LEMD3-201ENST00000308330 CXCL6P80162 114 aa11.32□□□□□ -0.6
LEMD3-201ENST00000308330 CRIP3Q6Q6R5 217 aa11.32□□□□□ -0.6
LEMD3-201ENST00000308330 POM121L12Q8N7R1 296 aa11.32□□□□□ -0.6
LEMD3-201ENST00000308330 BRWD1-AS2P59051 145 aa11.32□□□□□ -0.6
LEMD3-201ENST00000308330 NANOS2P60321 138 aaKnown RBP11.32□□□□□ -0.6
LEMD3-201ENST00000308330 SMR3AQ99954 134 aa11.32□□□□□ -0.6
LEMD3-201ENST00000308330 IGKV1D-37A0A075B6S9 117 aa11.31□□□□□ -0.6
LEMD3-201ENST00000308330 LINC00474Q9P2X8 69 aa11.31□□□□□ -0.6
LEMD3-201ENST00000308330 A0A1W2PPR1 153 aa11.31□□□□□ -0.6
LEMD3-201ENST00000308330 GAS8-AS1O95177 125 aa11.31□□□□□ -0.6
LEMD3-201ENST00000308330 BEAN1Q3B7T3 259 aa11.31□□□□□ -0.6
LEMD3-201ENST00000308330 NRACQ8N912 160 aa11.31□□□□□ -0.6
LEMD3-201ENST00000308330 DEFB135Q30KP9 77 aa11.31□□□□□ -0.6
LEMD3-201ENST00000308330 Q8N3U1 123 aa11.3□□□□□ -0.6
LEMD3-201ENST00000308330 CHD7Q9P2D1 2997 aa11.3□□□□□ -0.6
LEMD3-201ENST00000308330 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
LEMD3-201ENST00000308330 COL5A1P20908 1838 aaPredicted RBP11.29□□□□□ -0.6
LEMD3-201ENST00000308330 IGLV2-11P01706 119 aa11.28□□□□□ -0.6
LEMD3-201ENST00000308330 DEFB1P60022 68 aa11.28□□□□□ -0.6
LEMD3-201ENST00000308330 PRAC2D3DTV9 90 aa11.28□□□□□ -0.6
LEMD3-201ENST00000308330 MED14OSP0DP75 135 aa11.28□□□□□ -0.6
LEMD3-201ENST00000308330 BCE1O60756 84 aa11.28□□□□□ -0.6
LEMD3-201ENST00000308330 IGF1P05019 195 aa11.28□□□□□ -0.6
LEMD3-201ENST00000308330 ESM1Q9NQ30 184 aa11.28□□□□□ -0.6
LEMD3-201ENST00000308330 NDUFA1O15239 70 aa11.27□□□□□ -0.6
LEMD3-201ENST00000308330 LINC00269Q8N2A0 174 aa11.27□□□□□ -0.6
LEMD3-201ENST00000308330 KTN1-AS1Q86SY8 53 aa11.27□□□□□ -0.61
LEMD3-201ENST00000308330 MDFIQ99750 246 aa11.27□□□□□ -0.61
LEMD3-201ENST00000308330 TRBV10-3A0A0K0K1G6 114 aa11.27□□□□□ -0.61
LEMD3-201ENST00000308330 MAST4O15021 2626 aa11.27□□□□□ -0.61
LEMD3-201ENST00000308330 DEFB4AO15263 64 aa11.27□□□□□ -0.61
LEMD3-201ENST00000308330 CENPEQ02224 2701 aa11.26□□□□□ -0.61
LEMD3-201ENST00000308330 C1orf229Q6ZS94 237 aaPredicted RBP11.26□□□□□ -0.61
LEMD3-201ENST00000308330 TSPEAR-AS2P59090 65 aa11.26□□□□□ -0.61
LEMD3-201ENST00000308330 C10orf99Q6UWK7 81 aa11.26□□□□□ -0.61
LEMD3-201ENST00000308330 NUP210LQ5VU65 1888 aa11.26□□□□□ -0.61
LEMD3-201ENST00000308330 CDK2AP2O75956 126 aa11.25□□□□□ -0.61
LEMD3-201ENST00000308330 AVPP01185 164 aa11.25□□□□□ -0.61
LEMD3-201ENST00000308330 ANGP03950 147 aaKnown RBP11.25□□□□□ -0.61
LEMD3-201ENST00000308330 LINC01006Q8NI28 216 aa11.25□□□□□ -0.61
LEMD3-201ENST00000308330 UBE2D4Q9Y2X8 147 aa11.25□□□□□ -0.61
LEMD3-201ENST00000308330 LINC00482Q8N8I6 264 aa11.24□□□□□ -0.61
LEMD3-201ENST00000308330 IGLV4-3A0A075B6K6 122 aa11.24□□□□□ -0.61
LEMD3-201ENST00000308330 CCDC140Q96MF4 163 aa11.24□□□□□ -0.61
LEMD3-201ENST00000308330 USP24Q9UPU5 2620 aa11.24□□□□□ -0.61
LEMD3-201ENST00000308330 LIMD2Q9BT23 127 aa11.23□□□□□ -0.61
LEMD3-201ENST00000308330 CDKN2A-AS1Q9UH64 79 aa11.23□□□□□ -0.61
LEMD3-201ENST00000308330 LY6LH3BQJ8 138 aa11.23□□□□□ -0.61
LEMD3-201ENST00000308330 MGAM2Q2M2H8 2515 aa11.23□□□□□ -0.61
LEMD3-201ENST00000308330 EIF4EBP1Q13541 118 aaPredicted RBP11.22□□□□□ -0.61
LEMD3-201ENST00000308330 Q5XG85 94 aa11.22□□□□□ -0.61
LEMD3-201ENST00000308330 DCANP1Q8TF63 244 aa11.22□□□□□ -0.61
LEMD3-201ENST00000308330 CELA1Q9UNI1 258 aa11.22□□□□□ -0.61
LEMD3-201ENST00000308330 IGHV4-4A0A075B6R2 117 aa11.21□□□□□ -0.61
LEMD3-201ENST00000308330 RPL28P46779 137 aaKnown RBP11.21□□□□□ -0.61
LEMD3-201ENST00000308330 C9orf47Q6ZRZ4 202 aa11.21□□□□□ -0.61
LEMD3-201ENST00000308330 CCL18P55774 89 aa11.21□□□□□ -0.62
LEMD3-201ENST00000308330 HELZ2Q9BYK8 2649 aaKnown RBP11.21□□□□□ -0.62
LEMD3-201ENST00000308330 ZNF73O43830 326 aaPredicted RBP11.21□□□□□ -0.62
LEMD3-201ENST00000308330 C16orf74Q96GX8 76 aa11.21□□□□□ -0.62
LEMD3-201ENST00000308330 CLPSL2Q6UWE3 100 aa11.2□□□□□ -0.62
LEMD3-201ENST00000308330 DEFB105AQ8NG35 78 aa11.2□□□□□ -0.62
LEMD3-201ENST00000308330 ATRQ13535 2644 aa11.2□□□□□ -0.62
LEMD3-201ENST00000308330 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
LEMD3-201ENST00000308330 LAMA3Q16787 3333 aa11.2□□□□□ -0.62
LEMD3-201ENST00000308330 EML5Q05BV3 1969 aa11.2□□□□□ -0.62
LEMD3-201ENST00000308330 IGLV4-69A0A075B6H9 119 aa11.2□□□□□ -0.62
LEMD3-201ENST00000308330 SMIM11BQ8TCY0 68 aa11.2□□□□□ -0.62
LEMD3-201ENST00000308330 FAM30AQ9NZY2 134 aa11.2□□□□□ -0.62
LEMD3-201ENST00000308330 GYPEP15421 78 aa11.19□□□□□ -0.62
LEMD3-201ENST00000308330 SPAG11BQ08648 103 aa11.19□□□□□ -0.62
LEMD3-201ENST00000308330 ADAMTSL4-AS1Q5T5F5 129 aa11.19□□□□□ -0.62
LEMD3-201ENST00000308330 SMCR5Q8TEV8 140 aa11.19□□□□□ -0.62
LEMD3-201ENST00000308330 HTTP42858 3142 aa11.19□□□□□ -0.62
LEMD3-201ENST00000308330 IGKV2D-24A0A075B6R9 120 aa11.18□□□□□ -0.62
LEMD3-201ENST00000308330 PRR15Q8IV56 129 aa11.18□□□□□ -0.62
LEMD3-201ENST00000308330 CNFNQ9BYD5 112 aa11.18□□□□□ -0.62
LEMD3-201ENST00000308330 WFDC10AQ9H1F0 79 aa11.18□□□□□ -0.62
LEMD3-201ENST00000308330 MKI67P46013 3256 aaKnown RBP11.18□□□□□ -0.62
LEMD3-201ENST00000308330 CD164L2Q6UWJ8 174 aa11.17□□□□□ -0.62
LEMD3-201ENST00000308330 DEFB114Q30KQ6 69 aa11.17□□□□□ -0.62
LEMD3-201ENST00000308330 PSMG3-AS1Q96PY0 264 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 822.5 ms