RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 SCGB1A1P11684 91 aa10.11□□□□□ -0.79
RAB40A-201ENST00000304236 CIRBPQ14011 172 aaKnown RBP10.11□□□□□ -0.79
RAB40A-201ENST00000304236 TMEM101Q96IK0 257 aa10.11□□□□□ -0.79
RAB40A-201ENST00000304236 GTSF1LQ9H1H1 148 aa10.11□□□□□ -0.79
RAB40A-201ENST00000304236 NOP10Q9NPE3 64 aaKnown RBP10.11□□□□□ -0.79
RAB40A-201ENST00000304236 NOTCH1P46531 2555 aa10.1□□□□□ -0.79
RAB40A-201ENST00000304236 IGLV5-39A0A0G2JS06 123 aa10.1□□□□□ -0.79
RAB40A-201ENST00000304236 ADAMTSL4-AS1Q5T5F5 129 aa10.1□□□□□ -0.79
RAB40A-201ENST00000304236 OVOL2Q9BRP0 275 aa10.1□□□□□ -0.79
RAB40A-201ENST00000304236 ATXN8Q156A1 80 aa10.1□□□□□ -0.79
RAB40A-201ENST00000304236 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
RAB40A-201ENST00000304236 C19orf73Q9NVV2 129 aa10.1□□□□□ -0.79
RAB40A-201ENST00000304236 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
RAB40A-201ENST00000304236 H7C2G1 150 aa10.09□□□□□ -0.79
RAB40A-201ENST00000304236 H7C423 109 aa10.09□□□□□ -0.79
RAB40A-201ENST00000304236 GAGE4Q13068 117 aa10.09□□□□□ -0.79
RAB40A-201ENST00000304236 GAGE5Q13069 117 aa10.09□□□□□ -0.79
RAB40A-201ENST00000304236 NTM-AS1Q6ZSK4 140 aa10.09□□□□□ -0.79
RAB40A-201ENST00000304236 TRBV6-4A0A1B0GX49 114 aa10.08□□□□□ -0.8
RAB40A-201ENST00000304236 A8MZ25 164 aa10.08□□□□□ -0.8
RAB40A-201ENST00000304236 LINC00694P0DN24 101 aa10.08□□□□□ -0.8
RAB40A-201ENST00000304236 INSL3P51460 131 aa10.08□□□□□ -0.8
RAB40A-201ENST00000304236 COPS9Q8WXC6 57 aa10.08□□□□□ -0.8
RAB40A-201ENST00000304236 PLAC8L1A1L4L8 177 aa10.08□□□□□ -0.8
RAB40A-201ENST00000304236 UBE2L6O14933 153 aa10.08□□□□□ -0.8
RAB40A-201ENST00000304236 COX6A2Q02221 97 aa10.08□□□□□ -0.8
RAB40A-201ENST00000304236 TMEM243Q9BU79 118 aa10.08□□□□□ -0.8
RAB40A-201ENST00000304236 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
RAB40A-201ENST00000304236 TRGV2A0A075B6R0 118 aa10.07□□□□□ -0.8
RAB40A-201ENST00000304236 SLC25A20O43772 301 aa10.07□□□□□ -0.8
RAB40A-201ENST00000304236 RPL35AP18077 110 aaKnown RBP10.07□□□□□ -0.8
RAB40A-201ENST00000304236 TGP01266 2768 aa10.07□□□□□ -0.8
RAB40A-201ENST00000304236 COX6CP09669 75 aa10.06□□□□□ -0.8
RAB40A-201ENST00000304236 KPRPQ5T749 579 aaPredicted RBP10.06□□□□□ -0.8
RAB40A-201ENST00000304236 CSNK1G2-AS1Q8NCQ2 148 aa10.06□□□□□ -0.8
RAB40A-201ENST00000304236 LINC01600Q96MT4 127 aa10.06□□□□□ -0.8
RAB40A-201ENST00000304236 C9JAW5 83 aa10.06□□□□□ -0.8
RAB40A-201ENST00000304236 GAGE7O76087 117 aa10.06□□□□□ -0.8
RAB40A-201ENST00000304236 GAGE12FP0CL80 117 aa10.06□□□□□ -0.8
RAB40A-201ENST00000304236 GAGE12GP0CL81 117 aa10.06□□□□□ -0.8
RAB40A-201ENST00000304236 GAGE12IP0CL82 117 aa10.06□□□□□ -0.8
RAB40A-201ENST00000304236 CARD19Q96LW7 228 aa10.05□□□□□ -0.8
RAB40A-201ENST00000304236 ICOSQ9Y6W8 199 aa10.05□□□□□ -0.8
RAB40A-201ENST00000304236 TRAV13-1A0A0B4J241 112 aa10.05□□□□□ -0.8
RAB40A-201ENST00000304236 SMIM1B2RUZ4 78 aa10.05□□□□□ -0.8
RAB40A-201ENST00000304236 TRIAP1O43715 76 aa10.05□□□□□ -0.8
RAB40A-201ENST00000304236 LINC01620Q4KN68 170 aa10.05□□□□□ -0.8
RAB40A-201ENST00000304236 WFDC10AQ9H1F0 79 aa10.05□□□□□ -0.8
RAB40A-201ENST00000304236 Q9H8V8 135 aa10.05□□□□□ -0.8
RAB40A-201ENST00000304236 TRGV4A0A0C4DH28 118 aa10.04□□□□□ -0.8
RAB40A-201ENST00000304236 HERV-K104P63124 156 aa10.04□□□□□ -0.8
RAB40A-201ENST00000304236 ANKRD29Q8N6D5 301 aa10.04□□□□□ -0.8
RAB40A-201ENST00000304236 CMYA5Q8N3K9 4069 aa10.04□□□□□ -0.8
RAB40A-201ENST00000304236 TRBV10-2A0A0K0K1G8 114 aa10.02□□□□□ -0.81
RAB40A-201ENST00000304236 PRB2P02812 416 aaPredicted RBP10.02□□□□□ -0.81
RAB40A-201ENST00000304236 NPC2P61916 151 aa10.02□□□□□ -0.81
RAB40A-201ENST00000304236 OXLD1Q5BKU9 147 aa10.02□□□□□ -0.81
RAB40A-201ENST00000304236 LINC00308Q8TCZ7 52 aa10.02□□□□□ -0.81
RAB40A-201ENST00000304236 PPDPFQ9H3Y8 114 aa10.02□□□□□ -0.81
RAB40A-201ENST00000304236 TMEM262E9PQX1 116 aa10.01□□□□□ -0.81
RAB40A-201ENST00000304236 F5H768 121 aa10.01□□□□□ -0.81
RAB40A-201ENST00000304236 RPL13AP40429 203 aaKnown RBP10.01□□□□□ -0.81
RAB40A-201ENST00000304236 FHL2Q14192 279 aa10.01□□□□□ -0.81
RAB40A-201ENST00000304236 ZNF625Q96I27 306 aaPredicted RBP10.01□□□□□ -0.81
RAB40A-201ENST00000304236 CDIP1Q9H305 208 aa10.01□□□□□ -0.81
RAB40A-201ENST00000304236 KIR2DL5BQ8NHK3 375 aa9.99□□□□□ -0.81
RAB40A-201ENST00000304236 MRAPQ8TCY5 172 aa9.99□□□□□ -0.81
RAB40A-201ENST00000304236 LOC100131303A0A0U1RQF7 123 aa9.99□□□□□ -0.81
RAB40A-201ENST00000304236 PF4P02776 101 aa9.99□□□□□ -0.81
RAB40A-201ENST00000304236 MEIG1Q5JSS6 88 aa9.99□□□□□ -0.81
RAB40A-201ENST00000304236 DAND5Q8N907 189 aa9.99□□□□□ -0.81
RAB40A-201ENST00000304236 TRBV6-8A0A0A6YYG3 113 aa9.98□□□□□ -0.81
RAB40A-201ENST00000304236 H3BT86 120 aa9.98□□□□□ -0.81
RAB40A-201ENST00000304236 WFDC9Q8NEX5 89 aa9.98□□□□□ -0.81
RAB40A-201ENST00000304236 PRKDCP78527 4128 aaKnown RBP9.98□□□□□ -0.81
RAB40A-201ENST00000304236 NOTCH3Q9UM47 2321 aa9.97□□□□□ -0.81
RAB40A-201ENST00000304236 LST1O00453 97 aa9.97□□□□□ -0.81
RAB40A-201ENST00000304236 GAGE6Q13070 117 aa9.97□□□□□ -0.81
RAB40A-201ENST00000304236 LINC00612Q8N6U2 182 aa9.97□□□□□ -0.81
RAB40A-201ENST00000304236 LINC00482Q8N8I6 264 aa9.97□□□□□ -0.81
RAB40A-201ENST00000304236 SMIM9A6NGZ8 99 aa9.95□□□□□ -0.82
RAB40A-201ENST00000304236 C2orf82Q6UX34 121 aa9.95□□□□□ -0.82
RAB40A-201ENST00000304236 NTN5Q8WTR8 489 aaPredicted RBP9.95□□□□□ -0.82
RAB40A-201ENST00000304236 COX7B2Q8TF08 81 aa9.95□□□□□ -0.82
RAB40A-201ENST00000304236 CHCHD5Q9BSY4 110 aa9.95□□□□□ -0.82
RAB40A-201ENST00000304236 A0A0U1RRA0 63 aa9.94□□□□□ -0.82
RAB40A-201ENST00000304236 SOSTDC1Q6X4U4 206 aa9.94□□□□□ -0.82
RAB40A-201ENST00000304236 UBE2WQ96B02 151 aa9.94□□□□□ -0.82
RAB40A-201ENST00000304236 CLEC2BQ92478 149 aa9.93□□□□□ -0.82
RAB40A-201ENST00000304236 COX7A2LO14548 114 aa9.92□□□□□ -0.82
RAB40A-201ENST00000304236 IGLV4-60A0A075B6I1 120 aa9.92□□□□□ -0.82
RAB40A-201ENST00000304236 DEFB130BP0DP73 79 aa9.92□□□□□ -0.82
RAB40A-201ENST00000304236 DEFB130AP0DP74 79 aa9.92□□□□□ -0.82
RAB40A-201ENST00000304236 IGHV3OR16-9A0A0B4J2B5 98 aa9.91□□□□□ -0.82
RAB40A-201ENST00000304236 XGP55808 180 aa9.91□□□□□ -0.82
RAB40A-201ENST00000304236 C9orf66Q5T8R8 295 aa9.91□□□□□ -0.82
RAB40A-201ENST00000304236 A0A087WZ39 114 aa9.9□□□□□ -0.82
RAB40A-201ENST00000304236 MT-ATP8P03928 68 aa9.9□□□□□ -0.82
RAB40A-201ENST00000304236 FAM222AQ5U5X8 452 aa9.9□□□□□ -0.82
RAB40A-201ENST00000304236 TRAV13-2A0A0B4J235 113 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms