RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 ENHOQ6UWT2 76 aa13.99□□□□□ -0.17
TSR1-201ENST00000301364 CSDC2Q9Y534 153 aaKnown RBP13.99□□□□□ -0.17
TSR1-201ENST00000301364 COL4A2P08572 1712 aa13.99□□□□□ -0.17
TSR1-201ENST00000301364 USP9XQ93008 2570 aaPredicted RBP13.99□□□□□ -0.17
TSR1-201ENST00000301364 KIR2DL5BQ8NHK3 375 aa13.98□□□□□ -0.17
TSR1-201ENST00000301364 ANKRD11Q6UB99 2663 aaPredicted RBP13.97□□□□□ -0.17
TSR1-201ENST00000301364 LELP1Q5T871 98 aa13.97□□□□□ -0.17
TSR1-201ENST00000301364 HILS1P60008 231 aa13.96□□□□□ -0.17
TSR1-201ENST00000301364 BEAN1Q3B7T3 259 aa13.96□□□□□ -0.17
TSR1-201ENST00000301364 FAM110AQ9BQ89 295 aa13.96□□□□□ -0.17
TSR1-201ENST00000301364 KIF25-AS1Q9Y6Z4 181 aa13.96□□□□□ -0.18
TSR1-201ENST00000301364 DEFB131BA0A096LNP1 70 aa13.95□□□□□ -0.18
TSR1-201ENST00000301364 SERP2Q8N6R1 65 aa13.95□□□□□ -0.18
TSR1-201ENST00000301364 PRRC2AP48634 2157 aaKnown RBP13.94□□□□□ -0.18
TSR1-201ENST00000301364 USP17L23D6RBM5 183 aa13.94□□□□□ -0.18
TSR1-201ENST00000301364 WFDC9Q8NEX5 89 aa13.94□□□□□ -0.18
TSR1-201ENST00000301364 RPL28P46779 137 aaKnown RBP13.94□□□□□ -0.18
TSR1-201ENST00000301364 SYCNQ0VAF6 134 aa13.94□□□□□ -0.18
TSR1-201ENST00000301364 Q6ZQY7 126 aa13.94□□□□□ -0.18
TSR1-201ENST00000301364 ADAMTSL4-AS1Q5T5F5 129 aa13.93□□□□□ -0.18
TSR1-201ENST00000301364 NDUFA7O95182 113 aa13.93□□□□□ -0.18
TSR1-201ENST00000301364 C1orf158Q8N1D5 194 aa13.93□□□□□ -0.18
TSR1-201ENST00000301364 C14orf177Q52M58 125 aa13.93□□□□□ -0.18
TSR1-201ENST00000301364 INAFM1C9JVW0 142 aa13.92□□□□□ -0.18
TSR1-201ENST00000301364 A0A087WZ39 114 aa13.92□□□□□ -0.18
TSR1-201ENST00000301364 COX6A2Q02221 97 aa13.91□□□□□ -0.18
TSR1-201ENST00000301364 CLUHP3Q96NS8 147 aa13.91□□□□□ -0.18
TSR1-201ENST00000301364 USP9YO00507 2555 aaPredicted RBP13.91□□□□□ -0.18
TSR1-201ENST00000301364 COX7CP15954 63 aa13.91□□□□□ -0.18
TSR1-201ENST00000301364 FAM236DA0A1B0GTK5 79 aa13.9□□□□□ -0.18
TSR1-201ENST00000301364 NDUFC2O95298 119 aa13.9□□□□□ -0.18
TSR1-201ENST00000301364 FAM236CP0DP71 79 aa13.9□□□□□ -0.18
TSR1-201ENST00000301364 TLN2Q9Y4G6 2542 aa13.9□□□□□ -0.18
TSR1-201ENST00000301364 LINC00694P0DN24 101 aa13.9□□□□□ -0.18
TSR1-201ENST00000301364 CCDC179H3BU77 68 aa13.9□□□□□ -0.18
TSR1-201ENST00000301364 M0QXV9 152 aa13.9□□□□□ -0.18
TSR1-201ENST00000301364 M0R378 163 aa13.9□□□□□ -0.18
TSR1-201ENST00000301364 Q6JHZ5 121 aa13.9□□□□□ -0.18
TSR1-201ENST00000301364 IGLV1-51P01701 117 aa13.89□□□□□ -0.19
TSR1-201ENST00000301364 CCKP06307 115 aa13.89□□□□□ -0.19
TSR1-201ENST00000301364 HIGD2AQ9BW72 106 aa13.87□□□□□ -0.19
TSR1-201ENST00000301364 IGKV2-24A0A0C4DH68 120 aa13.87□□□□□ -0.19
TSR1-201ENST00000301364 SCXQ7RTU7 201 aa13.87□□□□□ -0.19
TSR1-201ENST00000301364 B9D2Q9BPU9 175 aa13.87□□□□□ -0.19
TSR1-201ENST00000301364 KLK5Q9Y337 293 aaPredicted RBP13.87□□□□□ -0.19
TSR1-201ENST00000301364 LINC00526Q96FQ7 95 aa13.86□□□□□ -0.19
TSR1-201ENST00000301364 KPRPQ5T749 579 aaPredicted RBP13.85□□□□□ -0.19
TSR1-201ENST00000301364 Q6ZSN1 163 aa13.85□□□□□ -0.19
TSR1-201ENST00000301364 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.85□□□□□ -0.19
TSR1-201ENST00000301364 FAM19A4Q96LR4 140 aa13.85□□□□□ -0.19
TSR1-201ENST00000301364 LINC00315P59091 139 aa13.84□□□□□ -0.19
TSR1-201ENST00000301364 ABCA12Q86UK0 2595 aa13.84□□□□□ -0.19
TSR1-201ENST00000301364 LY6G6DO95868 133 aa13.84□□□□□ -0.19
TSR1-201ENST00000301364 IGLV4-60A0A075B6I1 120 aa13.84□□□□□ -0.19
TSR1-201ENST00000301364 ZNF73O43830 326 aaPredicted RBP13.83□□□□□ -0.19
TSR1-201ENST00000301364 CYSRT1A8MQ03 144 aa13.83□□□□□ -0.2
TSR1-201ENST00000301364 DNAH12Q6ZR08 3092 aa13.83□□□□□ -0.2
TSR1-201ENST00000301364 FHL2Q14192 279 aa13.83□□□□□ -0.2
TSR1-201ENST00000301364 NDUFC1O43677 76 aa13.82□□□□□ -0.2
TSR1-201ENST00000301364 KRTAP10-9P60411 292 aa13.82□□□□□ -0.2
TSR1-201ENST00000301364 DHRS4-AS1Q9P1J3 65 aa13.82□□□□□ -0.2
TSR1-201ENST00000301364 H0Y9J4 135 aa13.81□□□□□ -0.2
TSR1-201ENST00000301364 C5orf47Q569G3 176 aa13.81□□□□□ -0.2
TSR1-201ENST00000301364 FAM19A1Q7Z5A9 133 aa13.81□□□□□ -0.2
TSR1-201ENST00000301364 SHISA2Q6UWI4 295 aa13.81□□□□□ -0.2
TSR1-201ENST00000301364 NTM-AS1Q6ZSK4 140 aa13.8□□□□□ -0.2
TSR1-201ENST00000301364 AGRNO00468 2067 aa13.8□□□□□ -0.2
TSR1-201ENST00000301364 Q8N814 137 aa13.79□□□□□ -0.2
TSR1-201ENST00000301364 TRAV10A0A0B4J240 114 aa13.79□□□□□ -0.2
TSR1-201ENST00000301364 PRB2P02812 416 aaPredicted RBP13.78□□□□□ -0.2
TSR1-201ENST00000301364 UNQ6190/PRO20217Q6UXQ8 127 aa13.78□□□□□ -0.2
TSR1-201ENST00000301364 SETD2Q9BYW2 2564 aaPredicted RBP13.77□□□□□ -0.2
TSR1-201ENST00000301364 IGKV2-28A0A075B6P5 120 aa13.77□□□□□ -0.21
TSR1-201ENST00000301364 IGKV2D-28P01615 120 aa13.77□□□□□ -0.21
TSR1-201ENST00000301364 A0A1B0GUV1 79 aa13.77□□□□□ -0.21
TSR1-201ENST00000301364 FAM19A5Q7Z5A7 132 aaPredicted RBP13.77□□□□□ -0.21
TSR1-201ENST00000301364 ATP5EP56381 51 aaPredicted RBP13.77□□□□□ -0.21
TSR1-201ENST00000301364 C16orf95Q9H693 158 aa13.77□□□□□ -0.21
TSR1-201ENST00000301364 A0A087WYN8 130 aa13.76□□□□□ -0.21
TSR1-201ENST00000301364 C3orf84H3BNL1 204 aa13.76□□□□□ -0.21
TSR1-201ENST00000301364 EGFEM1PQ0D2K5 195 aa13.75□□□□□ -0.21
TSR1-201ENST00000301364 C11orf72Q8NBR9 251 aa13.75□□□□□ -0.21
TSR1-201ENST00000301364 IGLV5-39A0A0G2JS06 123 aa13.74□□□□□ -0.21
TSR1-201ENST00000301364 IL17DQ8TAD2 202 aa13.74□□□□□ -0.21
TSR1-201ENST00000301364 CDIP1Q9H305 208 aa13.74□□□□□ -0.21
TSR1-201ENST00000301364 FAM19A3Q7Z5A8 133 aa13.73□□□□□ -0.21
TSR1-201ENST00000301364 CHKB-CPT1BH3BT56 60 aa13.73□□□□□ -0.21
TSR1-201ENST00000301364 KLK9Q2XQG4 91 aa13.73□□□□□ -0.21
TSR1-201ENST00000301364 LINC01561Q8N1V8 128 aa13.73□□□□□ -0.21
TSR1-201ENST00000301364 IGHV4-30-4P0DP06 118 aa13.73□□□□□ -0.21
TSR1-201ENST00000301364 NDUFC2-KCTD14E9PQ53 114 aa13.71□□□□□ -0.21
TSR1-201ENST00000301364 C9orf116Q5BN46 136 aaPredicted RBP13.71□□□□□ -0.21
TSR1-201ENST00000301364 Q8N2B8 174 aa13.7□□□□□ -0.22
TSR1-201ENST00000301364 FN1P02751 2386 aaKnown RBP13.7□□□□□ -0.22
TSR1-201ENST00000301364 BRK1Q8WUW1 75 aa13.7□□□□□ -0.22
TSR1-201ENST00000301364 TRBV10-3A0A0K0K1G6 114 aa13.69□□□□□ -0.22
TSR1-201ENST00000301364 PRO0461Q9UI25 63 aa13.69□□□□□ -0.22
TSR1-201ENST00000301364 PRR3P79522 188 aaKnown RBP13.68□□□□□ -0.22
TSR1-201ENST00000301364 JMJD1CQ15652 2540 aa13.68□□□□□ -0.22
TSR1-201ENST00000301364 SNURFQ9Y675 71 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms