RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ATP5EP2Q5VTU8 51 aa9.86□□□□□ -0.83
CHRFAM7A-201ENST00000299847 DHRS4-AS1Q9P1J3 65 aa9.86□□□□□ -0.83
CHRFAM7A-201ENST00000299847 UNQ6190/PRO20217Q6UXQ8 127 aa9.86□□□□□ -0.83
CHRFAM7A-201ENST00000299847 A6NED7 52 aa9.86□□□□□ -0.83
CHRFAM7A-201ENST00000299847 IGLV1-40P01703 118 aa9.86□□□□□ -0.83
CHRFAM7A-201ENST00000299847 K7ERS5 55 aa9.85□□□□□ -0.83
CHRFAM7A-201ENST00000299847 CIRBP-AS1Q8TBR5 109 aa9.85□□□□□ -0.83
CHRFAM7A-201ENST00000299847 LST1O00453 97 aa9.85□□□□□ -0.83
CHRFAM7A-201ENST00000299847 CDC42SE2Q9NRR3 84 aa9.84□□□□□ -0.83
CHRFAM7A-201ENST00000299847 FAM19A3Q7Z5A8 133 aa9.84□□□□□ -0.83
CHRFAM7A-201ENST00000299847 PRR15LQ9BU68 103 aa9.84□□□□□ -0.83
CHRFAM7A-201ENST00000299847 M0QXV9 152 aa9.83□□□□□ -0.84
CHRFAM7A-201ENST00000299847 XGP55808 180 aa9.83□□□□□ -0.84
CHRFAM7A-201ENST00000299847 MRPL55Q7Z7F7 128 aaKnown RBP9.83□□□□□ -0.84
CHRFAM7A-201ENST00000299847 FAM208BQ5VWN6 2430 aa9.83□□□□□ -0.84
CHRFAM7A-201ENST00000299847 PTPRQQ9UMZ3 2332 aa9.83□□□□□ -0.84
CHRFAM7A-201ENST00000299847 POLR2KP53803 58 aaKnown RBP9.83□□□□□ -0.84
CHRFAM7A-201ENST00000299847 ZNF580Q9UK33 172 aa9.83□□□□□ -0.84
CHRFAM7A-201ENST00000299847 ZNF706Q9Y5V0 76 aaPredicted RBP9.83□□□□□ -0.84
CHRFAM7A-201ENST00000299847 PRR14LQ5THK1 2151 aa9.83□□□□□ -0.84
CHRFAM7A-201ENST00000299847 A0A087WYN8 130 aa9.83□□□□□ -0.84
CHRFAM7A-201ENST00000299847 PLA2G2AP14555 144 aa9.82□□□□□ -0.84
CHRFAM7A-201ENST00000299847 C6orf223Q8N319 242 aa9.82□□□□□ -0.84
CHRFAM7A-201ENST00000299847 LINC00694P0DN24 101 aa9.82□□□□□ -0.84
CHRFAM7A-201ENST00000299847 IGLV4-60A0A075B6I1 120 aa9.82□□□□□ -0.84
CHRFAM7A-201ENST00000299847 ESRGQ1W209 222 aa9.82□□□□□ -0.84
CHRFAM7A-201ENST00000299847 DEFB116Q30KQ4 102 aa9.82□□□□□ -0.84
CHRFAM7A-201ENST00000299847 TIMM17BO60830 172 aa9.81□□□□□ -0.84
CHRFAM7A-201ENST00000299847 SERP2Q8N6R1 65 aa9.81□□□□□ -0.84
CHRFAM7A-201ENST00000299847 HCFC1P51610 2035 aa9.81□□□□□ -0.84
CHRFAM7A-201ENST00000299847 MRGPRG-AS1Q2M3A8 158 aa9.81□□□□□ -0.84
CHRFAM7A-201ENST00000299847 FSTL3O95633 263 aa9.81□□□□□ -0.84
CHRFAM7A-201ENST00000299847 C10orf25Q5T742 122 aa9.81□□□□□ -0.84
CHRFAM7A-201ENST00000299847 Q8N9L7 120 aa9.81□□□□□ -0.84
CHRFAM7A-201ENST00000299847 A0A087WVE0 104 aa9.8□□□□□ -0.84
CHRFAM7A-201ENST00000299847 MRPS36P82909 103 aaKnown RBP9.8□□□□□ -0.84
CHRFAM7A-201ENST00000299847 RAI1Q7Z5J4 1906 aaPredicted RBP9.8□□□□□ -0.84
CHRFAM7A-201ENST00000299847 TSPEAR-AS2P59090 65 aa9.8□□□□□ -0.84
CHRFAM7A-201ENST00000299847 X6R8D5 127 aa9.8□□□□□ -0.84
CHRFAM7A-201ENST00000299847 SERP1Q9Y6X1 66 aa9.79□□□□□ -0.84
CHRFAM7A-201ENST00000299847 CREBBPQ92793 2442 aa9.79□□□□□ -0.84
CHRFAM7A-201ENST00000299847 Q6Q795 121 aa9.79□□□□□ -0.84
CHRFAM7A-201ENST00000299847 TRBV10-3A0A0K0K1G6 114 aa9.79□□□□□ -0.84
CHRFAM7A-201ENST00000299847 LINC00242Q5T6M2 205 aa9.79□□□□□ -0.84
CHRFAM7A-201ENST00000299847 IGHV6-1A0A0B4J1U7 121 aa9.79□□□□□ -0.84
CHRFAM7A-201ENST00000299847 Q8IZM0 81 aa9.79□□□□□ -0.84
CHRFAM7A-201ENST00000299847 ODF3L2Q3SX64 289 aa9.78□□□□□ -0.84
CHRFAM7A-201ENST00000299847 SOSTDC1Q6X4U4 206 aa9.78□□□□□ -0.84
CHRFAM7A-201ENST00000299847 Q6ZVQ6 151 aa9.78□□□□□ -0.84
CHRFAM7A-201ENST00000299847 IGIPA6NJ69 53 aa9.78□□□□□ -0.84
CHRFAM7A-201ENST00000299847 ATG2AQ2TAZ0 1938 aa9.78□□□□□ -0.84
CHRFAM7A-201ENST00000299847 COX17Q14061 63 aa9.78□□□□□ -0.84
CHRFAM7A-201ENST00000299847 CHCHD7Q9BUK0 85 aa9.77□□□□□ -0.84
CHRFAM7A-201ENST00000299847 MUC6Q6W4X9 2439 aa9.77□□□□□ -0.84
CHRFAM7A-201ENST00000299847 ARHGAP32A7KAX9 2087 aa9.77□□□□□ -0.84
CHRFAM7A-201ENST00000299847 Q6ZSN1 163 aa9.77□□□□□ -0.85
CHRFAM7A-201ENST00000299847 HIVEP2P31629 2446 aa9.77□□□□□ -0.85
CHRFAM7A-201ENST00000299847 Q6ZTC4 211 aa9.77□□□□□ -0.85
CHRFAM7A-201ENST00000299847 URB1-AS1Q96HZ7 61 aa9.77□□□□□ -0.85
CHRFAM7A-201ENST00000299847 WNK1Q9H4A3 2382 aa9.77□□□□□ -0.85
CHRFAM7A-201ENST00000299847 REG3GQ6UW15 175 aa9.76□□□□□ -0.85
CHRFAM7A-201ENST00000299847 A8MTW9 85 aa9.75□□□□□ -0.85
CHRFAM7A-201ENST00000299847 ADAMTSL4-AS1Q5T5F5 129 aa9.75□□□□□ -0.85
CHRFAM7A-201ENST00000299847 PCOTHQ58A44 107 aa9.75□□□□□ -0.85
CHRFAM7A-201ENST00000299847 PLXNB1O43157 2135 aa9.75□□□□□ -0.85
CHRFAM7A-201ENST00000299847 SMIM1B2RUZ4 78 aa9.75□□□□□ -0.85
CHRFAM7A-201ENST00000299847 COX7CP15954 63 aa9.75□□□□□ -0.85
CHRFAM7A-201ENST00000299847 Q8N814 137 aa9.75□□□□□ -0.85
CHRFAM7A-201ENST00000299847 IGLV5-52A0A0A0MRZ9 124 aa9.75□□□□□ -0.85
CHRFAM7A-201ENST00000299847 SPINK1P00995 79 aa9.74□□□□□ -0.85
CHRFAM7A-201ENST00000299847 LINC00310P59036 64 aa9.74□□□□□ -0.85
CHRFAM7A-201ENST00000299847 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.74□□□□□ -0.85
CHRFAM7A-201ENST00000299847 LINC01556Q5JQF7 62 aa9.74□□□□□ -0.85
CHRFAM7A-201ENST00000299847 NTM-AS1Q6ZSK4 140 aa9.74□□□□□ -0.85
CHRFAM7A-201ENST00000299847 LINC00208Q96KT6 92 aa9.73□□□□□ -0.85
CHRFAM7A-201ENST00000299847 C1orf137Q5JT78 98 aa9.73□□□□□ -0.85
CHRFAM7A-201ENST00000299847 EXPH5Q8NEV8 1989 aa9.73□□□□□ -0.85
CHRFAM7A-201ENST00000299847 NUPR2A6NF83 97 aa9.73□□□□□ -0.85
CHRFAM7A-201ENST00000299847 PRO3102Q9H379 93 aa9.72□□□□□ -0.85
CHRFAM7A-201ENST00000299847 FHL2Q14192 279 aa9.72□□□□□ -0.85
CHRFAM7A-201ENST00000299847 OTOGLQ3ZCN5 2332 aa9.72□□□□□ -0.85
CHRFAM7A-201ENST00000299847 MUC22E2RYF6 1773 aaPredicted RBP9.72□□□□□ -0.85
CHRFAM7A-201ENST00000299847 V9GYY9 64 aa9.71□□□□□ -0.86
CHRFAM7A-201ENST00000299847 Q6JHZ5 121 aa9.71□□□□□ -0.86
CHRFAM7A-201ENST00000299847 LINC00474Q9P2X8 69 aa9.71□□□□□ -0.86
CHRFAM7A-201ENST00000299847 NDUFC1O43677 76 aa9.7□□□□□ -0.86
CHRFAM7A-201ENST00000299847 LINC01547P58512 204 aaPredicted RBP9.7□□□□□ -0.86
CHRFAM7A-201ENST00000299847 EML5Q05BV3 1969 aa9.69□□□□□ -0.86
CHRFAM7A-201ENST00000299847 PTPRSQ13332 1948 aa9.69□□□□□ -0.86
CHRFAM7A-201ENST00000299847 ATP5EP56381 51 aaPredicted RBP9.69□□□□□ -0.86
CHRFAM7A-201ENST00000299847 Q9BRP9 147 aa9.69□□□□□ -0.86
CHRFAM7A-201ENST00000299847 A0A1W2PPR1 153 aa9.68□□□□□ -0.86
CHRFAM7A-201ENST00000299847 RPL28P46779 137 aaKnown RBP9.68□□□□□ -0.86
CHRFAM7A-201ENST00000299847 BEAN1Q3B7T3 259 aa9.68□□□□□ -0.86
CHRFAM7A-201ENST00000299847 SBSPONQ8IVN8 264 aa9.68□□□□□ -0.86
CHRFAM7A-201ENST00000299847 IMUPQ9GZP8 106 aa9.67□□□□□ -0.86
CHRFAM7A-201ENST00000299847 TRBV7-6A0A0J9YX20 115 aa9.67□□□□□ -0.86
CHRFAM7A-201ENST00000299847 LINC00575Q6W349 94 aa9.67□□□□□ -0.86
CHRFAM7A-201ENST00000299847 CNFNQ9BYD5 112 aa9.66□□□□□ -0.86
CHRFAM7A-201ENST00000299847 PSPHP1O15172 72 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms