RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 C5orf52A6NGY3 159 aa11.89□□□□□ -0.51
TMED3-201ENST00000299705 SNRPEP62304 92 aaKnown RBP11.89□□□□□ -0.51
TMED3-201ENST00000299705 COX6A2Q02221 97 aa11.89□□□□□ -0.51
TMED3-201ENST00000299705 A0A087WTM6 91 aa11.89□□□□□ -0.51
TMED3-201ENST00000299705 COX7A2LO14548 114 aa11.89□□□□□ -0.51
TMED3-201ENST00000299705 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
TMED3-201ENST00000299705 IGLC3P0DOY3 106 aa11.88□□□□□ -0.51
TMED3-201ENST00000299705 S100A2P29034 98 aa11.88□□□□□ -0.51
TMED3-201ENST00000299705 CHTOPQ9Y3Y2 248 aaKnown RBP11.88□□□□□ -0.51
TMED3-201ENST00000299705 IGLV4-69A0A075B6H9 119 aa11.87□□□□□ -0.51
TMED3-201ENST00000299705 CFAP161Q6P656 301 aa11.87□□□□□ -0.51
TMED3-201ENST00000299705 SPATA12Q7Z6I5 190 aa11.87□□□□□ -0.51
TMED3-201ENST00000299705 C5orf38Q86SI9 138 aa11.87□□□□□ -0.51
TMED3-201ENST00000299705 IGLV5-45A0A087WSX0 123 aa11.86□□□□□ -0.51
TMED3-201ENST00000299705 A0A087WZ39 114 aa11.86□□□□□ -0.51
TMED3-201ENST00000299705 USP17L23D6RBM5 183 aa11.86□□□□□ -0.51
TMED3-201ENST00000299705 F8VRH5 84 aa11.86□□□□□ -0.51
TMED3-201ENST00000299705 ODF1Q14990 250 aa11.86□□□□□ -0.51
TMED3-201ENST00000299705 LINC01561Q8N1V8 128 aa11.86□□□□□ -0.51
TMED3-201ENST00000299705 DNAH10Q8IVF4 4471 aa11.85□□□□□ -0.51
TMED3-201ENST00000299705 SYS1-DBNDD2H3BUS1 97 aa11.85□□□□□ -0.51
TMED3-201ENST00000299705 EREGO14944 169 aa11.85□□□□□ -0.51
TMED3-201ENST00000299705 WFDC2Q14508 124 aa11.85□□□□□ -0.51
TMED3-201ENST00000299705 C14orf177Q52M58 125 aa11.85□□□□□ -0.51
TMED3-201ENST00000299705 HIST1H2BLQ99880 126 aa11.85□□□□□ -0.51
TMED3-201ENST00000299705 IGHV1-58A0A0C4DH39 117 aa11.84□□□□□ -0.51
TMED3-201ENST00000299705 H0Y8G0 127 aa11.84□□□□□ -0.51
TMED3-201ENST00000299705 LECT2O14960 151 aa11.84□□□□□ -0.51
TMED3-201ENST00000299705 MALP21145 153 aa11.84□□□□□ -0.51
TMED3-201ENST00000299705 CHAC1Q9BUX1 264 aa11.84□□□□□ -0.51
TMED3-201ENST00000299705 MRPL35Q9NZE8 188 aaKnown RBP11.84□□□□□ -0.51
TMED3-201ENST00000299705 CDKN2A-AS1Q9UH64 79 aa11.84□□□□□ -0.51
TMED3-201ENST00000299705 DNAH17Q9UFH2 4485 aa11.84□□□□□ -0.51
TMED3-201ENST00000299705 APOMO95445 188 aa11.83□□□□□ -0.52
TMED3-201ENST00000299705 C3orf79P0CE67 100 aa11.83□□□□□ -0.52
TMED3-201ENST00000299705 LINC00469Q8N7U9 141 aa11.83□□□□□ -0.52
TMED3-201ENST00000299705 C15orf56Q8N910 161 aa11.83□□□□□ -0.52
TMED3-201ENST00000299705 FRAS1Q86XX4 4008 aa11.83□□□□□ -0.52
TMED3-201ENST00000299705 PET117Q6UWS5 81 aa11.83□□□□□ -0.52
TMED3-201ENST00000299705 Q8N814 137 aa11.83□□□□□ -0.52
TMED3-201ENST00000299705 TMA7Q9Y2S6 64 aaKnown RBP11.83□□□□□ -0.52
TMED3-201ENST00000299705 C11orf86A6NJI1 115 aa11.82□□□□□ -0.52
TMED3-201ENST00000299705 IGHV3-64A0A075B6Q5 118 aa11.81□□□□□ -0.52
TMED3-201ENST00000299705 GVQW2A0A096LPI5 108 aaPredicted RBP11.81□□□□□ -0.52
TMED3-201ENST00000299705 ZNF22P17026 224 aaPredicted RBP11.81□□□□□ -0.52
TMED3-201ENST00000299705 KRTDAPP60985 99 aa11.81□□□□□ -0.52
TMED3-201ENST00000299705 H3BRM9 83 aa11.8□□□□□ -0.52
TMED3-201ENST00000299705 PLNP26678 52 aa11.8□□□□□ -0.52
TMED3-201ENST00000299705 LINC01545Q5VT33 79 aa11.8□□□□□ -0.52
TMED3-201ENST00000299705 OR10D4PQ8NGN7 298 aa11.8□□□□□ -0.52
TMED3-201ENST00000299705 A0A1B0GVY2 172 aa11.79□□□□□ -0.52
TMED3-201ENST00000299705 hDV102S1A0JD36 115 aa11.78□□□□□ -0.52
TMED3-201ENST00000299705 DPM2O94777 84 aa11.78□□□□□ -0.52
TMED3-201ENST00000299705 TMEM170BQ5T4T1 132 aa11.78□□□□□ -0.52
TMED3-201ENST00000299705 HIGD2BQ4VC39 106 aa11.77□□□□□ -0.52
TMED3-201ENST00000299705 NTN5Q8WTR8 489 aaPredicted RBP11.77□□□□□ -0.52
TMED3-201ENST00000299705 ORAOV1Q8WV07 137 aa11.77□□□□□ -0.52
TMED3-201ENST00000299705 FAT2Q9NYQ8 4349 aa11.77□□□□□ -0.53
TMED3-201ENST00000299705 SMIM1B2RUZ4 78 aa11.76□□□□□ -0.53
TMED3-201ENST00000299705 ZNF561-AS1K7EIQ3 104 aa11.76□□□□□ -0.53
TMED3-201ENST00000299705 IGKCP01834 107 aa11.76□□□□□ -0.53
TMED3-201ENST00000299705 PMCHL2Q9BQD1 86 aa11.76□□□□□ -0.53
TMED3-201ENST00000299705 PGPEP1Q9NXJ5 209 aa11.76□□□□□ -0.53
TMED3-201ENST00000299705 C20orf202A1L168 122 aa11.75□□□□□ -0.53
TMED3-201ENST00000299705 SPINK8P0C7L1 97 aa11.75□□□□□ -0.53
TMED3-201ENST00000299705 SPAG11BQ08648 103 aa11.75□□□□□ -0.53
TMED3-201ENST00000299705 C2orf48Q96LS8 159 aa11.75□□□□□ -0.53
TMED3-201ENST00000299705 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.74□□□□□ -0.53
TMED3-201ENST00000299705 IGLV5-39A0A0G2JS06 123 aa11.74□□□□□ -0.53
TMED3-201ENST00000299705 F8WDY8 70 aa11.74□□□□□ -0.53
TMED3-201ENST00000299705 KRTAP10-2P60368 255 aa11.74□□□□□ -0.53
TMED3-201ENST00000299705 CNBPP62633 177 aaKnown RBP11.74□□□□□ -0.53
TMED3-201ENST00000299705 KIAA0087Q14695 138 aa11.74□□□□□ -0.53
TMED3-201ENST00000299705 TMEM223A0PJW6 202 aa11.73□□□□□ -0.53
TMED3-201ENST00000299705 AKR1D1P51857 326 aa11.73□□□□□ -0.53
TMED3-201ENST00000299705 CDPF1Q6NVV7 123 aa11.73□□□□□ -0.53
TMED3-201ENST00000299705 Q8IZM0 81 aa11.73□□□□□ -0.53
TMED3-201ENST00000299705 SLPIP03973 132 aa11.72□□□□□ -0.53
TMED3-201ENST00000299705 LINC00526Q96FQ7 95 aa11.72□□□□□ -0.53
TMED3-201ENST00000299705 PRSS2P07478 247 aa11.71□□□□□ -0.53
TMED3-201ENST00000299705 IGLV5-52A0A0A0MRZ9 124 aa11.7□□□□□ -0.54
TMED3-201ENST00000299705 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.7□□□□□ -0.54
TMED3-201ENST00000299705 C6orf226Q5I0X4 101 aa11.7□□□□□ -0.54
TMED3-201ENST00000299705 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
TMED3-201ENST00000299705 TOMM7Q9P0U1 55 aa11.7□□□□□ -0.54
TMED3-201ENST00000299705 CAMK2N2Q96S95 79 aa11.7□□□□□ -0.54
TMED3-201ENST00000299705 HERVK_113P61574 105 aa11.69□□□□□ -0.54
TMED3-201ENST00000299705 SYCNQ0VAF6 134 aa11.69□□□□□ -0.54
TMED3-201ENST00000299705 NDUFA1O15239 70 aa11.68□□□□□ -0.54
TMED3-201ENST00000299705 CXCL5P42830 114 aa11.68□□□□□ -0.54
TMED3-201ENST00000299705 C9orf163Q8N9P6 203 aa11.68□□□□□ -0.54
TMED3-201ENST00000299705 PKD1P98161 4303 aa11.68□□□□□ -0.54
TMED3-201ENST00000299705 FUSP35637 526 aaKnown RBP eCLIP11.67□□□□□ -0.54
TMED3-201ENST00000299705 CKS1BP61024 79 aa11.67□□□□□ -0.54
TMED3-201ENST00000299705 CARD19Q96LW7 228 aa11.67□□□□□ -0.54
TMED3-201ENST00000299705 Q6ZRU5 148 aa11.66□□□□□ -0.54
TMED3-201ENST00000299705 DNAH11Q96DT5 4516 aa11.66□□□□□ -0.54
TMED3-201ENST00000299705 RNF151Q2KHN1 245 aa11.65□□□□□ -0.54
TMED3-201ENST00000299705 UNQ6190/PRO20217Q6UXQ8 127 aa11.65□□□□□ -0.54
TMED3-201ENST00000299705 LEPROTO15243 131 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms