RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 LINC00469Q8N7U9 141 aa16.6■□□□□ 0.25
GTF2A1-201ENST00000298173 TENM2Q9NT68 2774 aa16.6■□□□□ 0.25
GTF2A1-201ENST00000298173 IGKV2D-26A0A0A0MRZ7 120 aa16.59■□□□□ 0.25
GTF2A1-201ENST00000298173 UBE2WQ96B02 151 aa16.59■□□□□ 0.25
GTF2A1-201ENST00000298173 E9PLD3 99 aa16.59■□□□□ 0.25
GTF2A1-201ENST00000298173 UBE2DNLQ8IWF7 75 aa16.58■□□□□ 0.24
GTF2A1-201ENST00000298173 CHCHD10Q8WYQ3 142 aaPredicted RBP16.58■□□□□ 0.24
GTF2A1-201ENST00000298173 TRAV8-4A0A0B4J246 113 aa16.56■□□□□ 0.24
GTF2A1-201ENST00000298173 CRPP02741 224 aa16.56■□□□□ 0.24
GTF2A1-201ENST00000298173 XCL1P47992 114 aa16.56■□□□□ 0.24
GTF2A1-201ENST00000298173 MIAQ16674 131 aa16.56■□□□□ 0.24
GTF2A1-201ENST00000298173 CD164L2Q6UWJ8 174 aa16.56■□□□□ 0.24
GTF2A1-201ENST00000298173 IGLV10-54A0A075B6I4 117 aa16.56■□□□□ 0.24
GTF2A1-201ENST00000298173 IBA57-AS1B1ANH7 110 aa16.56■□□□□ 0.24
GTF2A1-201ENST00000298173 H3BRM9 83 aa16.56■□□□□ 0.24
GTF2A1-201ENST00000298173 HERVK_113P61574 105 aa16.56■□□□□ 0.24
GTF2A1-201ENST00000298173 PRO1933Q9H354 126 aa16.56■□□□□ 0.24
GTF2A1-201ENST00000298173 K7EP13 123 aa16.55■□□□□ 0.24
GTF2A1-201ENST00000298173 A0A087WZ39 114 aa16.54■□□□□ 0.24
GTF2A1-201ENST00000298173 DNAH1Q9P2D7 4330 aa16.54■□□□□ 0.24
GTF2A1-201ENST00000298173 C10orf126Q8N4M7 172 aa16.53■□□□□ 0.24
GTF2A1-201ENST00000298173 C14orf144Q96I85 54 aa16.53■□□□□ 0.24
GTF2A1-201ENST00000298173 TRAV8-3A0A0A6YYJ7 113 aa16.53■□□□□ 0.24
GTF2A1-201ENST00000298173 IGHV1-58A0A0C4DH39 117 aa16.53■□□□□ 0.24
GTF2A1-201ENST00000298173 SPINK8P0C7L1 97 aa16.53■□□□□ 0.24
GTF2A1-201ENST00000298173 CASC10Q5T4H9 136 aa16.53■□□□□ 0.24
GTF2A1-201ENST00000298173 KRTAP26-1Q6PEX3 210 aa16.53■□□□□ 0.24
GTF2A1-201ENST00000298173 VPS13DQ5THJ4 4388 aa16.52■□□□□ 0.24
GTF2A1-201ENST00000298173 SMIM1B2RUZ4 78 aa16.52■□□□□ 0.23
GTF2A1-201ENST00000298173 COX8AP10176 69 aa16.52■□□□□ 0.23
GTF2A1-201ENST00000298173 NMUP48645 174 aa16.52■□□□□ 0.23
GTF2A1-201ENST00000298173 FOXI1Q12951 378 aa16.52■□□□□ 0.23
GTF2A1-201ENST00000298173 IGLV5-39A0A0G2JS06 123 aa16.51■□□□□ 0.23
GTF2A1-201ENST00000298173 C5orf38Q86SI9 138 aa16.51■□□□□ 0.23
GTF2A1-201ENST00000298173 PCP2Q8IVA1 136 aa16.51■□□□□ 0.23
GTF2A1-201ENST00000298173 C3orf84H3BNL1 204 aa16.5■□□□□ 0.23
GTF2A1-201ENST00000298173 LEPROTO15243 131 aa16.5■□□□□ 0.23
GTF2A1-201ENST00000298173 LINC01561Q8N1V8 128 aa16.5■□□□□ 0.23
GTF2A1-201ENST00000298173 IGHV3-64A0A075B6Q5 118 aa16.5■□□□□ 0.23
GTF2A1-201ENST00000298173 TSTD3H0UI37 97 aa16.49■□□□□ 0.23
GTF2A1-201ENST00000298173 BOD1L2Q8IYS8 172 aa16.49■□□□□ 0.23
GTF2A1-201ENST00000298173 TTTY13Q9BZ97 58 aa16.49■□□□□ 0.23
GTF2A1-201ENST00000298173 GAGE12HA6NDE8 117 aa16.48■□□□□ 0.23
GTF2A1-201ENST00000298173 TSPEAR-AS2P59090 65 aa16.48■□□□□ 0.23
GTF2A1-201ENST00000298173 KRTAP1-5Q9BYS1 174 aa16.48■□□□□ 0.23
GTF2A1-201ENST00000298173 MAPKAPK5-AS1Q8N8E1 139 aa16.47■□□□□ 0.23
GTF2A1-201ENST00000298173 J3QQQ9 107 aa16.46■□□□□ 0.23
GTF2A1-201ENST00000298173 DLEU1O43261 78 aa16.46■□□□□ 0.23
GTF2A1-201ENST00000298173 PLEKHB2Q96CS7 222 aa16.46■□□□□ 0.23
GTF2A1-201ENST00000298173 MIEN1Q9BRT3 115 aa16.46■□□□□ 0.23
GTF2A1-201ENST00000298173 COX7A2LO14548 114 aa16.46■□□□□ 0.23
GTF2A1-201ENST00000298173 UQCR10Q9UDW1 63 aa16.46■□□□□ 0.23
GTF2A1-201ENST00000298173 SLC25A34Q6PIV7 304 aa16.45■□□□□ 0.22
GTF2A1-201ENST00000298173 TP73-AS1Q9UF72 201 aa16.45■□□□□ 0.22
GTF2A1-201ENST00000298173 C1orf43Q9BWL3 253 aa16.44■□□□□ 0.22
GTF2A1-201ENST00000298173 Q9HAA7 133 aa16.43■□□□□ 0.22
GTF2A1-201ENST00000298173 IGKV2D-24A0A075B6R9 120 aa16.41■□□□□ 0.22
GTF2A1-201ENST00000298173 LGALS3P17931 250 aaKnown RBP16.41■□□□□ 0.22
GTF2A1-201ENST00000298173 NBDYA0A0U1RRE5 68 aa16.4■□□□□ 0.22
GTF2A1-201ENST00000298173 MYMXA0A1B0GTQ4 84 aa16.4■□□□□ 0.22
GTF2A1-201ENST00000298173 MALP21145 153 aa16.39■□□□□ 0.21
GTF2A1-201ENST00000298173 ZNF815PA8K554 130 aa16.38■□□□□ 0.21
GTF2A1-201ENST00000298173 COX7B2Q8TF08 81 aa16.38■□□□□ 0.21
GTF2A1-201ENST00000298173 TTC32Q5I0X7 151 aa16.37■□□□□ 0.21
GTF2A1-201ENST00000298173 RMI2Q96E14 147 aa16.37■□□□□ 0.21
GTF2A1-201ENST00000298173 DDTP30046 118 aa16.36■□□□□ 0.21
GTF2A1-201ENST00000298173 KIAA0087Q14695 138 aa16.36■□□□□ 0.21
GTF2A1-201ENST00000298173 C2orf91Q6ZV80 131 aa16.36■□□□□ 0.21
GTF2A1-201ENST00000298173 NDUFA12Q9UI09 145 aa16.36■□□□□ 0.21
GTF2A1-201ENST00000298173 PCP4L1A6NKN8 68 aa16.35■□□□□ 0.21
GTF2A1-201ENST00000298173 APOMO95445 188 aa16.35■□□□□ 0.21
GTF2A1-201ENST00000298173 Q8IZM0 81 aa16.35■□□□□ 0.21
GTF2A1-201ENST00000298173 ZNF625Q96I27 306 aaPredicted RBP16.34■□□□□ 0.21
GTF2A1-201ENST00000298173 TOMM7Q9P0U1 55 aa16.34■□□□□ 0.21
GTF2A1-201ENST00000298173 COX11Q9Y6N1 276 aa16.34■□□□□ 0.21
GTF2A1-201ENST00000298173 NDUFA1O15239 70 aa16.34■□□□□ 0.21
GTF2A1-201ENST00000298173 ORAOV1Q8WV07 137 aa16.34■□□□□ 0.21
GTF2A1-201ENST00000298173 LINC00476Q8WZB0 136 aa16.34■□□□□ 0.21
GTF2A1-201ENST00000298173 HIGD1BQ9P298 99 aa16.31■□□□□ 0.2
GTF2A1-201ENST00000298173 KMT2AQ03164 3969 aa16.31■□□□□ 0.2
GTF2A1-201ENST00000298173 HNRNPA3P51991 378 aaKnown RBP16.3■□□□□ 0.2
GTF2A1-201ENST00000298173 C6orf226Q5I0X4 101 aa16.3■□□□□ 0.2
GTF2A1-201ENST00000298173 Q6ZR54 194 aa16.3■□□□□ 0.2
GTF2A1-201ENST00000298173 C15orf56Q8N910 161 aa16.3■□□□□ 0.2
GTF2A1-201ENST00000298173 TM2D2Q9BX73 214 aa16.3■□□□□ 0.2
GTF2A1-201ENST00000298173 LY6G6CO95867 125 aa16.3■□□□□ 0.2
GTF2A1-201ENST00000298173 A0A0J9YXY3 114 aa16.29■□□□□ 0.2
GTF2A1-201ENST00000298173 PRSS2P07478 247 aa16.28■□□□□ 0.2
GTF2A1-201ENST00000298173 ALMS1Q8TCU4 4167 aa16.27■□□□□ 0.2
GTF2A1-201ENST00000298173 SPAG11BQ08648 103 aa16.27■□□□□ 0.19
GTF2A1-201ENST00000298173 SCGB1D4Q6XE38 83 aa16.27■□□□□ 0.19
GTF2A1-201ENST00000298173 DNAH10Q8IVF4 4471 aa16.26■□□□□ 0.19
GTF2A1-201ENST00000298173 M0R2N4 97 aa16.26■□□□□ 0.19
GTF2A1-201ENST00000298173 HERV-K104P63124 156 aa16.25■□□□□ 0.19
GTF2A1-201ENST00000298173 CFAP161Q6P656 301 aa16.25■□□□□ 0.19
GTF2A1-201ENST00000298173 DNAH6Q9C0G6 4158 aa16.25■□□□□ 0.19
GTF2A1-201ENST00000298173 CXCL5P42830 114 aa16.24■□□□□ 0.19
GTF2A1-201ENST00000298173 CTAG1AP78358 180 aa16.24■□□□□ 0.19
GTF2A1-201ENST00000298173 SFTA2Q6UW10 78 aa16.24■□□□□ 0.19
GTF2A1-201ENST00000298173 C2orf82Q6UX34 121 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms