RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 SPANXA1Q9NS26 97 aa10.3□□□□□ -0.76
CCDC140-201ENST00000295226 IGLV4-60A0A075B6I1 120 aa10.29□□□□□ -0.76
CCDC140-201ENST00000295226 LINC00476Q8WZB0 136 aa10.29□□□□□ -0.76
CCDC140-201ENST00000295226 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
CCDC140-201ENST00000295226 ALMS1Q8TCU4 4167 aa10.29□□□□□ -0.76
CCDC140-201ENST00000295226 RBX1P62877 108 aa10.28□□□□□ -0.76
CCDC140-201ENST00000295226 AMMECR1LQ6DCA0 310 aa10.28□□□□□ -0.76
CCDC140-201ENST00000295226 VAMP3Q15836 100 aa10.28□□□□□ -0.76
CCDC140-201ENST00000295226 RNASE13Q5GAN3 156 aaKnown RBP10.28□□□□□ -0.76
CCDC140-201ENST00000295226 MAPKAPK5-AS1Q8N8E1 139 aa10.28□□□□□ -0.76
CCDC140-201ENST00000295226 UBE2D4Q9Y2X8 147 aa10.28□□□□□ -0.76
CCDC140-201ENST00000295226 KMT2AQ03164 3969 aa10.27□□□□□ -0.76
CCDC140-201ENST00000295226 IGLV4-3A0A075B6K6 122 aa10.27□□□□□ -0.77
CCDC140-201ENST00000295226 PTTG1IPP53801 180 aa10.27□□□□□ -0.77
CCDC140-201ENST00000295226 SMAGPQ0VAQ4 97 aa10.27□□□□□ -0.77
CCDC140-201ENST00000295226 CEND1Q8N111 149 aa10.27□□□□□ -0.77
CCDC140-201ENST00000295226 C9orf118A6NHY6 69 aa10.26□□□□□ -0.77
CCDC140-201ENST00000295226 DNAH10OSP0CZ25 163 aa10.26□□□□□ -0.77
CCDC140-201ENST00000295226 SMIM13P0DJ93 91 aa10.26□□□□□ -0.77
CCDC140-201ENST00000295226 GCSHP23434 173 aa10.26□□□□□ -0.77
CCDC140-201ENST00000295226 LINC01556Q5JQF7 62 aa10.26□□□□□ -0.77
CCDC140-201ENST00000295226 FAM104AQ969W3 186 aa10.26□□□□□ -0.77
CCDC140-201ENST00000295226 AMELXQ99217 191 aa10.26□□□□□ -0.77
CCDC140-201ENST00000295226 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
CCDC140-201ENST00000295226 H7C423 109 aa10.25□□□□□ -0.77
CCDC140-201ENST00000295226 M0R2N4 97 aa10.25□□□□□ -0.77
CCDC140-201ENST00000295226 TMEM170BQ5T4T1 132 aa10.25□□□□□ -0.77
CCDC140-201ENST00000295226 CLPSL2Q6UWE3 100 aa10.25□□□□□ -0.77
CCDC140-201ENST00000295226 TIMM21Q9BVV7 248 aa10.25□□□□□ -0.77
CCDC140-201ENST00000295226 KLK12Q9UKR0 248 aa10.25□□□□□ -0.77
CCDC140-201ENST00000295226 ZNF815PA8K554 130 aa10.25□□□□□ -0.77
CCDC140-201ENST00000295226 ANGP03950 147 aaKnown RBP10.25□□□□□ -0.77
CCDC140-201ENST00000295226 DGAT2L7PQ6IED9 249 aa10.25□□□□□ -0.77
CCDC140-201ENST00000295226 Q6ZUT4 128 aa10.25□□□□□ -0.77
CCDC140-201ENST00000295226 KRTAP1-5Q9BYS1 174 aa10.25□□□□□ -0.77
CCDC140-201ENST00000295226 A0A1B0GUV1 79 aa10.24□□□□□ -0.77
CCDC140-201ENST00000295226 Q6ZVH6 145 aa10.24□□□□□ -0.77
CCDC140-201ENST00000295226 OR5A1Q8NGJ0 315 aa10.24□□□□□ -0.77
CCDC140-201ENST00000295226 HIST1H4GQ99525 98 aa10.24□□□□□ -0.77
CCDC140-201ENST00000295226 IGKV3OR2-268A0A0C4DH90 116 aa10.23□□□□□ -0.77
CCDC140-201ENST00000295226 MRPS36P82909 103 aaKnown RBP10.23□□□□□ -0.77
CCDC140-201ENST00000295226 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
CCDC140-201ENST00000295226 PLEKHB2Q96CS7 222 aa10.23□□□□□ -0.77
CCDC140-201ENST00000295226 TMEM101Q96IK0 257 aa10.23□□□□□ -0.77
CCDC140-201ENST00000295226 CDC42SE2Q9NRR3 84 aa10.23□□□□□ -0.77
CCDC140-201ENST00000295226 LEPROTO15243 131 aa10.22□□□□□ -0.77
CCDC140-201ENST00000295226 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
CCDC140-201ENST00000295226 GTF2H5Q6ZYL4 71 aa10.22□□□□□ -0.77
CCDC140-201ENST00000295226 TMEM238LA0A1B0GVL6 79 aa10.22□□□□□ -0.77
CCDC140-201ENST00000295226 TMEM223A0PJW6 202 aa10.22□□□□□ -0.77
CCDC140-201ENST00000295226 A6NJY4 79 aa10.22□□□□□ -0.77
CCDC140-201ENST00000295226 FXYD2P54710 66 aa10.22□□□□□ -0.77
CCDC140-201ENST00000295226 HYDINQ4G0P3 5121 aa10.21□□□□□ -0.77
CCDC140-201ENST00000295226 NBDYA0A0U1RRE5 68 aa10.21□□□□□ -0.78
CCDC140-201ENST00000295226 CCL25O15444 150 aa10.21□□□□□ -0.78
CCDC140-201ENST00000295226 LGALS3P17931 250 aaKnown RBP10.21□□□□□ -0.78
CCDC140-201ENST00000295226 CSDC2Q9Y534 153 aaKnown RBP10.21□□□□□ -0.78
CCDC140-201ENST00000295226 J3QQQ9 107 aa10.2□□□□□ -0.78
CCDC140-201ENST00000295226 ZNF22P17026 224 aaPredicted RBP10.2□□□□□ -0.78
CCDC140-201ENST00000295226 ENHOQ6UWT2 76 aa10.2□□□□□ -0.78
CCDC140-201ENST00000295226 UBE2WQ96B02 151 aa10.2□□□□□ -0.78
CCDC140-201ENST00000295226 SPANXB1Q9NS25 103 aaPredicted RBP10.2□□□□□ -0.78
CCDC140-201ENST00000295226 SACSQ9NZJ4 4579 aa10.2□□□□□ -0.78
CCDC140-201ENST00000295226 LCE6AA0A183 80 aa10.19□□□□□ -0.78
CCDC140-201ENST00000295226 TINCRA0A1B0GVN0 87 aa10.19□□□□□ -0.78
CCDC140-201ENST00000295226 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
CCDC140-201ENST00000295226 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
CCDC140-201ENST00000295226 Q9HAA7 133 aa10.19□□□□□ -0.78
CCDC140-201ENST00000295226 DNAH6Q9C0G6 4158 aa10.19□□□□□ -0.78
CCDC140-201ENST00000295226 A0A0J9YXV3 536 aa10.18□□□□□ -0.78
CCDC140-201ENST00000295226 REG3AQ06141 175 aa10.18□□□□□ -0.78
CCDC140-201ENST00000295226 IGLV10-54A0A075B6I4 117 aa10.18□□□□□ -0.78
CCDC140-201ENST00000295226 A0A1B0GWB2 263 aa10.18□□□□□ -0.78
CCDC140-201ENST00000295226 GAGE10A6NGK3 116 aa10.18□□□□□ -0.78
CCDC140-201ENST00000295226 IBA57-AS1B1ANH7 110 aa10.18□□□□□ -0.78
CCDC140-201ENST00000295226 H3BUT2 72 aa10.18□□□□□ -0.78
CCDC140-201ENST00000295226 NHP2Q9NX24 153 aaKnown RBP10.18□□□□□ -0.78
CCDC140-201ENST00000295226 TRAV13-1A0A0B4J241 112 aa10.17□□□□□ -0.78
CCDC140-201ENST00000295226 A0A1W2PPM0 123 aa10.17□□□□□ -0.78
CCDC140-201ENST00000295226 FABP2P12104 132 aa10.17□□□□□ -0.78
CCDC140-201ENST00000295226 SRSF9Q13242 221 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC140-201ENST00000295226 PRR34Q9NV39 138 aa10.17□□□□□ -0.78
CCDC140-201ENST00000295226 RAB37Q96AX2 223 aa10.16□□□□□ -0.78
CCDC140-201ENST00000295226 KMT2CQ8NEZ4 4911 aaKnown RBP10.16□□□□□ -0.78
CCDC140-201ENST00000295226 K7EP34 96 aa10.15□□□□□ -0.78
CCDC140-201ENST00000295226 CRPP02741 224 aa10.15□□□□□ -0.78
CCDC140-201ENST00000295226 Q6ZR54 194 aa10.15□□□□□ -0.78
CCDC140-201ENST00000295226 C10orf126Q8N4M7 172 aa10.15□□□□□ -0.78
CCDC140-201ENST00000295226 LINC00959A0A1B0GUT2 108 aa10.15□□□□□ -0.79
CCDC140-201ENST00000295226 TTC32Q5I0X7 151 aa10.15□□□□□ -0.79
CCDC140-201ENST00000295226 FAM19A3Q7Z5A8 133 aa10.15□□□□□ -0.79
CCDC140-201ENST00000295226 GEMIN7Q9H840 131 aaKnown RBP10.15□□□□□ -0.79
CCDC140-201ENST00000295226 IGHV1-58A0A0C4DH39 117 aa10.14□□□□□ -0.79
CCDC140-201ENST00000295226 UBE2D1P51668 147 aa10.14□□□□□ -0.79
CCDC140-201ENST00000295226 TSPEAR-AS2P59090 65 aa10.14□□□□□ -0.79
CCDC140-201ENST00000295226 DNAH10Q8IVF4 4471 aa10.14□□□□□ -0.79
CCDC140-201ENST00000295226 IGLV5-45A0A087WSX0 123 aa10.13□□□□□ -0.79
CCDC140-201ENST00000295226 K7EP13 123 aa10.13□□□□□ -0.79
CCDC140-201ENST00000295226 IGKV2D-24A0A075B6R9 120 aa10.12□□□□□ -0.79
CCDC140-201ENST00000295226 TMEM238C9JI98 176 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms