RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 COX7A2LO14548 114 aa9.72□□□□□ -0.85
SCAF4-201ENST00000286835 LINC00694P0DN24 101 aa9.72□□□□□ -0.85
SCAF4-201ENST00000286835 SND1-IT1Q9HBX3 110 aa9.72□□□□□ -0.85
SCAF4-201ENST00000286835 MGAM2Q2M2H8 2515 aa9.72□□□□□ -0.85
SCAF4-201ENST00000286835 MAST4O15021 2626 aa9.71□□□□□ -0.85
SCAF4-201ENST00000286835 A0A096LPF7 62 aa9.71□□□□□ -0.85
SCAF4-201ENST00000286835 NDUFA1O15239 70 aa9.71□□□□□ -0.86
SCAF4-201ENST00000286835 CUBNO60494 3623 aa9.7□□□□□ -0.86
SCAF4-201ENST00000286835 KLK9Q2XQG4 91 aa9.7□□□□□ -0.86
SCAF4-201ENST00000286835 INAFM2P0DMQ5 153 aa9.7□□□□□ -0.86
SCAF4-201ENST00000286835 DNAJC30Q96LL9 226 aa9.69□□□□□ -0.86
SCAF4-201ENST00000286835 RBMY1BA6NDE4 496 aaKnown RBP9.69□□□□□ -0.86
SCAF4-201ENST00000286835 RBMY1EA6NEQ0 496 aaKnown RBP9.69□□□□□ -0.86
SCAF4-201ENST00000286835 RBMY1DP0C7P1 496 aaKnown RBP9.69□□□□□ -0.86
SCAF4-201ENST00000286835 LINC00242Q5T6M2 205 aa9.69□□□□□ -0.86
SCAF4-201ENST00000286835 C14orf132Q9NPU4 83 aa9.69□□□□□ -0.86
SCAF4-201ENST00000286835 ITPR1Q14643 2758 aa9.69□□□□□ -0.86
SCAF4-201ENST00000286835 K7EQD1 137 aa9.68□□□□□ -0.86
SCAF4-201ENST00000286835 NHLRC4P0CG21 123 aaPredicted RBP9.68□□□□□ -0.86
SCAF4-201ENST00000286835 MRPL23Q16540 153 aaKnown RBP9.68□□□□□ -0.86
SCAF4-201ENST00000286835 Q8N2B8 174 aa9.68□□□□□ -0.86
SCAF4-201ENST00000286835 CMC4P56277 68 aaPredicted RBP9.68□□□□□ -0.86
SCAF4-201ENST00000286835 LITAFQ99732 161 aa9.68□□□□□ -0.86
SCAF4-201ENST00000286835 TRAV13-2A0A0B4J235 113 aa9.68□□□□□ -0.86
SCAF4-201ENST00000286835 LY6G6DO95868 133 aa9.67□□□□□ -0.86
SCAF4-201ENST00000286835 LECT2O14960 151 aa9.67□□□□□ -0.86
SCAF4-201ENST00000286835 XCL1P47992 114 aa9.67□□□□□ -0.86
SCAF4-201ENST00000286835 SLPIP03973 132 aa9.67□□□□□ -0.86
SCAF4-201ENST00000286835 SDIM1Q6ZPB5 146 aa9.67□□□□□ -0.86
SCAF4-201ENST00000286835 ZANQ9Y493 2812 aa9.67□□□□□ -0.86
SCAF4-201ENST00000286835 LOC100131303A0A0U1RQF7 123 aa9.66□□□□□ -0.86
SCAF4-201ENST00000286835 TMEM89A2RUT3 159 aa9.66□□□□□ -0.86
SCAF4-201ENST00000286835 ACYP1P07311 99 aa9.66□□□□□ -0.86
SCAF4-201ENST00000286835 TIRAPP58753 221 aa9.66□□□□□ -0.86
SCAF4-201ENST00000286835 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.66□□□□□ -0.86
SCAF4-201ENST00000286835 COX7B2Q8TF08 81 aa9.65□□□□□ -0.86
SCAF4-201ENST00000286835 ZNF702PQ9H963 129 aa9.65□□□□□ -0.86
SCAF4-201ENST00000286835 LINC00643Q86TS7 51 aa9.65□□□□□ -0.87
SCAF4-201ENST00000286835 SMIM1B2RUZ4 78 aa9.64□□□□□ -0.87
SCAF4-201ENST00000286835 MALP21145 153 aa9.64□□□□□ -0.87
SCAF4-201ENST00000286835 TMEM86BQ8N661 226 aa9.64□□□□□ -0.87
SCAF4-201ENST00000286835 WFDC10AQ9H1F0 79 aa9.64□□□□□ -0.87
SCAF4-201ENST00000286835 GCN1Q92616 2671 aaKnown RBP9.64□□□□□ -0.87
SCAF4-201ENST00000286835 DEFB114Q30KQ6 69 aa9.64□□□□□ -0.87
SCAF4-201ENST00000286835 C4orf3Q8WVX3 66 aa9.64□□□□□ -0.87
SCAF4-201ENST00000286835 Q6Q795 121 aa9.63□□□□□ -0.87
SCAF4-201ENST00000286835 CRYBG3Q68DQ2 2970 aa9.63□□□□□ -0.87
SCAF4-201ENST00000286835 TIMM17BO60830 172 aa9.63□□□□□ -0.87
SCAF4-201ENST00000286835 LINC01006Q8NI28 216 aa9.63□□□□□ -0.87
SCAF4-201ENST00000286835 UNC79Q9P2D8 2635 aa9.62□□□□□ -0.87
SCAF4-201ENST00000286835 SOSTDC1Q6X4U4 206 aa9.62□□□□□ -0.87
SCAF4-201ENST00000286835 A0A1B0GX51 115 aa9.62□□□□□ -0.87
SCAF4-201ENST00000286835 M0QXV9 152 aa9.61□□□□□ -0.87
SCAF4-201ENST00000286835 NCR3O14931 201 aa9.61□□□□□ -0.87
SCAF4-201ENST00000286835 BRI3O95415 125 aa9.61□□□□□ -0.87
SCAF4-201ENST00000286835 CFAP161Q6P656 301 aa9.61□□□□□ -0.87
SCAF4-201ENST00000286835 IGLV10-54A0A075B6I4 117 aa9.61□□□□□ -0.87
SCAF4-201ENST00000286835 KLK5Q9Y337 293 aaPredicted RBP9.61□□□□□ -0.87
SCAF4-201ENST00000286835 ESM1Q9NQ30 184 aa9.6□□□□□ -0.87
SCAF4-201ENST00000286835 TRACP01848 142 aa9.59□□□□□ -0.87
SCAF4-201ENST00000286835 RNF152Q8N8N0 203 aa9.59□□□□□ -0.87
SCAF4-201ENST00000286835 FAM218AQ96MZ4 157 aa9.59□□□□□ -0.87
SCAF4-201ENST00000286835 CDC42SE2Q9NRR3 84 aa9.59□□□□□ -0.87
SCAF4-201ENST00000286835 FAM240AA0A1B0GVK7 77 aa9.59□□□□□ -0.87
SCAF4-201ENST00000286835 S100A7L2Q5SY68 101 aa9.59□□□□□ -0.87
SCAF4-201ENST00000286835 SHISA2Q6UWI4 295 aa9.58□□□□□ -0.88
SCAF4-201ENST00000286835 MRAPQ8TCY5 172 aa9.58□□□□□ -0.88
SCAF4-201ENST00000286835 ODF3L2Q3SX64 289 aa9.58□□□□□ -0.88
SCAF4-201ENST00000286835 SMIM11BQ8TCY0 68 aa9.58□□□□□ -0.88
SCAF4-201ENST00000286835 F5H768 121 aa9.58□□□□□ -0.88
SCAF4-201ENST00000286835 DEFB4AO15263 64 aa9.58□□□□□ -0.88
SCAF4-201ENST00000286835 OVOL2Q9BRP0 275 aa9.58□□□□□ -0.88
SCAF4-201ENST00000286835 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
SCAF4-201ENST00000286835 C1orf158Q8N1D5 194 aa9.57□□□□□ -0.88
SCAF4-201ENST00000286835 C11orf72Q8NBR9 251 aa9.57□□□□□ -0.88
SCAF4-201ENST00000286835 LAMTOR3Q9UHA4 124 aa9.57□□□□□ -0.88
SCAF4-201ENST00000286835 A0A087WYN8 130 aa9.57□□□□□ -0.88
SCAF4-201ENST00000286835 TRBV10-1A0A0K0K1A3 114 aa9.57□□□□□ -0.88
SCAF4-201ENST00000286835 SS18Q15532 418 aa9.57□□□□□ -0.88
SCAF4-201ENST00000286835 TMEM126AQ9H061 195 aa9.57□□□□□ -0.88
SCAF4-201ENST00000286835 A0A087WVE0 104 aa9.56□□□□□ -0.88
SCAF4-201ENST00000286835 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
SCAF4-201ENST00000286835 C3orf22Q8N5N4 141 aa9.56□□□□□ -0.88
SCAF4-201ENST00000286835 SVIPQ8NHG7 77 aa9.56□□□□□ -0.88
SCAF4-201ENST00000286835 TEX15Q9BXT5 2789 aa9.56□□□□□ -0.88
SCAF4-201ENST00000286835 DAD1P61803 113 aa9.56□□□□□ -0.88
SCAF4-201ENST00000286835 LINC00337Q8N6G1 96 aa9.55□□□□□ -0.88
SCAF4-201ENST00000286835 ORMDL1Q9P0S3 153 aa9.55□□□□□ -0.88
SCAF4-201ENST00000286835 FAM104AQ969W3 186 aa9.55□□□□□ -0.88
SCAF4-201ENST00000286835 UQCRQO14949 82 aa9.55□□□□□ -0.88
SCAF4-201ENST00000286835 HILS1P60008 231 aa9.55□□□□□ -0.88
SCAF4-201ENST00000286835 BSNQ9UPA5 3926 aa9.55□□□□□ -0.88
SCAF4-201ENST00000286835 IGLV4-60A0A075B6I1 120 aa9.54□□□□□ -0.88
SCAF4-201ENST00000286835 GYPEP15421 78 aa9.54□□□□□ -0.88
SCAF4-201ENST00000286835 CCL18P55774 89 aa9.54□□□□□ -0.88
SCAF4-201ENST00000286835 DEFB135Q30KP9 77 aa9.54□□□□□ -0.88
SCAF4-201ENST00000286835 C9orf66Q5T8R8 295 aa9.54□□□□□ -0.88
SCAF4-201ENST00000286835 H0YGX0 51 aa9.54□□□□□ -0.88
SCAF4-201ENST00000286835 SMCR5Q8TEV8 140 aa9.54□□□□□ -0.88
SCAF4-201ENST00000286835 SETXQ7Z333 2677 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms