RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 IGHV3-16A0A0C4DH30 117 aa5.53□□□□□ -1.52
TRIM42-201ENST00000286349 UBE2D1P51668 147 aa5.53□□□□□ -1.52
TRIM42-201ENST00000286349 SORL1Q92673 2214 aa5.53□□□□□ -1.52
TRIM42-201ENST00000286349 IGKV2D-26A0A0A0MRZ7 120 aa5.53□□□□□ -1.52
TRIM42-201ENST00000286349 GAS8-AS1O95177 125 aa5.53□□□□□ -1.52
TRIM42-201ENST00000286349 MGPP08493 103 aa5.53□□□□□ -1.52
TRIM42-201ENST00000286349 FXYD7P58549 80 aa5.53□□□□□ -1.52
TRIM42-201ENST00000286349 DEFB136Q30KP8 78 aa5.53□□□□□ -1.52
TRIM42-201ENST00000286349 ATRQ13535 2644 aa5.53□□□□□ -1.52
TRIM42-201ENST00000286349 CMC4P56277 68 aaPredicted RBP5.52□□□□□ -1.53
TRIM42-201ENST00000286349 SPINK13Q1W4C9 94 aa5.52□□□□□ -1.53
TRIM42-201ENST00000286349 C18orf65Q6ZTR6 163 aa5.52□□□□□ -1.53
TRIM42-201ENST00000286349 TM2D3Q9BRN9 247 aa5.52□□□□□ -1.53
TRIM42-201ENST00000286349 KIF25-AS1Q9Y6Z4 181 aa5.52□□□□□ -1.53
TRIM42-201ENST00000286349 VWFP04275 2813 aa5.52□□□□□ -1.53
TRIM42-201ENST00000286349 IGHV1-58A0A0C4DH39 117 aa5.52□□□□□ -1.53
TRIM42-201ENST00000286349 PRSS1P07477 247 aa5.52□□□□□ -1.53
TRIM42-201ENST00000286349 DEFB131AP59861 70 aa5.52□□□□□ -1.53
TRIM42-201ENST00000286349 DEFB114Q30KQ6 69 aa5.52□□□□□ -1.53
TRIM42-201ENST00000286349 PIK3CD-AS1Q5SR53 167 aa5.52□□□□□ -1.53
TRIM42-201ENST00000286349 IGKV3-20P01619 116 aa5.51□□□□□ -1.53
TRIM42-201ENST00000286349 PROK1P58294 105 aa5.51□□□□□ -1.53
TRIM42-201ENST00000286349 TMEM61Q8N0U2 210 aa5.51□□□□□ -1.53
TRIM42-201ENST00000286349 TOMM6Q96B49 74 aa5.51□□□□□ -1.53
TRIM42-201ENST00000286349 LINC00467Q9BRT7 94 aa5.51□□□□□ -1.53
TRIM42-201ENST00000286349 TTTY13Q9BZ97 58 aa5.51□□□□□ -1.53
TRIM42-201ENST00000286349 TRAV12-1A0A0B4J245 112 aa5.51□□□□□ -1.53
TRIM42-201ENST00000286349 TRBV6-5A0A0K0K1A5 114 aa5.51□□□□□ -1.53
TRIM42-201ENST00000286349 TRBV10-2A0A0K0K1G8 114 aa5.51□□□□□ -1.53
TRIM42-201ENST00000286349 LINC00315P59091 139 aa5.51□□□□□ -1.53
TRIM42-201ENST00000286349 SDIM1Q6ZPB5 146 aa5.51□□□□□ -1.53
TRIM42-201ENST00000286349 CCL24O00175 119 aa5.5□□□□□ -1.53
TRIM42-201ENST00000286349 VCYO14598 125 aa5.5□□□□□ -1.53
TRIM42-201ENST00000286349 PLNP26678 52 aa5.5□□□□□ -1.53
TRIM42-201ENST00000286349 MDFIQ99750 246 aa5.5□□□□□ -1.53
TRIM42-201ENST00000286349 MAP6D1Q9H9H5 199 aa5.5□□□□□ -1.53
TRIM42-201ENST00000286349 TEX49A0A1B0GTD5 131 aa5.5□□□□□ -1.53
TRIM42-201ENST00000286349 SPATA3Q8NHX4 192 aa5.5□□□□□ -1.53
TRIM42-201ENST00000286349 TMEM243Q9BU79 118 aa5.5□□□□□ -1.53
TRIM42-201ENST00000286349 NOTCH3Q9UM47 2321 aa5.5□□□□□ -1.53
TRIM42-201ENST00000286349 C8orf87E5RJ46 101 aa5.49□□□□□ -1.53
TRIM42-201ENST00000286349 F5H697 171 aa5.49□□□□□ -1.53
TRIM42-201ENST00000286349 CD28P10747 220 aa5.49□□□□□ -1.53
TRIM42-201ENST00000286349 SUMO4Q6EEV6 95 aa5.49□□□□□ -1.53
TRIM42-201ENST00000286349 KTN1-AS1Q86SY8 53 aa5.49□□□□□ -1.53
TRIM42-201ENST00000286349 RPL39LQ96EH5 51 aaKnown RBP5.49□□□□□ -1.53
TRIM42-201ENST00000286349 SCGB3A1Q96QR1 104 aa5.49□□□□□ -1.53
TRIM42-201ENST00000286349 INSP01308 110 aa5.49□□□□□ -1.53
TRIM42-201ENST00000286349 POLR2KP53803 58 aaKnown RBP5.49□□□□□ -1.53
TRIM42-201ENST00000286349 TRBV27A0A0K0K1C4 114 aa5.48□□□□□ -1.53
TRIM42-201ENST00000286349 ATP5EP56381 51 aaPredicted RBP5.48□□□□□ -1.53
TRIM42-201ENST00000286349 ATXN8Q156A1 80 aa5.48□□□□□ -1.53
TRIM42-201ENST00000286349 ZNF876PQ49A33 203 aa5.48□□□□□ -1.53
TRIM42-201ENST00000286349 C2orf66Q6UXQ4 117 aa5.48□□□□□ -1.53
TRIM42-201ENST00000286349 F8VRH5 84 aa5.48□□□□□ -1.53
TRIM42-201ENST00000286349 TMEM141Q96I45 108 aa5.48□□□□□ -1.53
TRIM42-201ENST00000286349 ADARB2-AS1A8MUL3 147 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 RHOHQ15669 191 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 PAPPA-AS1Q5QFB9 102 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 FAM74A4Q5TZK3 123 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 MAPKAPK5-AS1Q8N8E1 139 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 COL6A5A8TX70 2615 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 SDHAF1A6NFY7 115 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 LYRM9A8MSI8 78 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 M0QY20 66 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 TIMM17BO60830 172 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 LGALS3P17931 250 aaKnown RBP5.47□□□□□ -1.53
TRIM42-201ENST00000286349 FHL2Q14192 279 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 SS18Q15532 418 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 TIMM17AQ99595 171 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 ANK2Q01484 3957 aa5.47□□□□□ -1.53
TRIM42-201ENST00000286349 NDUFA11Q86Y39 141 aa5.46□□□□□ -1.53
TRIM42-201ENST00000286349 C11orf68Q9H3H3 251 aaKnown RBP5.46□□□□□ -1.53
TRIM42-201ENST00000286349 MRPL35Q9NZE8 188 aaKnown RBP5.46□□□□□ -1.53
TRIM42-201ENST00000286349 RBMY1BA6NDE4 496 aaKnown RBP5.46□□□□□ -1.54
TRIM42-201ENST00000286349 RBMY1EA6NEQ0 496 aaKnown RBP5.46□□□□□ -1.54
TRIM42-201ENST00000286349 RBMY1DP0C7P1 496 aaKnown RBP5.46□□□□□ -1.54
TRIM42-201ENST00000286349 RBMY1A1P0DJD3 496 aaKnown RBP5.46□□□□□ -1.54
TRIM42-201ENST00000286349 RBMY1CP0DJD4 496 aa5.46□□□□□ -1.54
TRIM42-201ENST00000286349 RBMY1FQ15415 496 aaKnown RBP5.46□□□□□ -1.54
TRIM42-201ENST00000286349 NSUN5P1Q3KNT7 163 aa5.46□□□□□ -1.54
TRIM42-201ENST00000286349 AGRNO00468 2067 aa5.45□□□□□ -1.54
TRIM42-201ENST00000286349 A0A0B4J2C4 111 aa5.45□□□□□ -1.54
TRIM42-201ENST00000286349 I3L3M4 83 aa5.45□□□□□ -1.54
TRIM42-201ENST00000286349 C6orf223Q8N319 242 aa5.45□□□□□ -1.54
TRIM42-201ENST00000286349 Q9H8V8 135 aa5.45□□□□□ -1.54
TRIM42-201ENST00000286349 TRRAPQ9Y4A5 3859 aa5.45□□□□□ -1.54
TRIM42-201ENST00000286349 NDUFS5O43920 106 aa5.45□□□□□ -1.54
TRIM42-201ENST00000286349 ODF3L2Q3SX64 289 aa5.45□□□□□ -1.54
TRIM42-201ENST00000286349 DNHD1Q96M86 4753 aa5.44□□□□□ -1.54
TRIM42-201ENST00000286349 MUC4Q99102 2169 aa5.44□□□□□ -1.54
TRIM42-201ENST00000286349 ZNF22P17026 224 aaPredicted RBP5.44□□□□□ -1.54
TRIM42-201ENST00000286349 SCGB1D4Q6XE38 83 aa5.44□□□□□ -1.54
TRIM42-201ENST00000286349 STAB1Q9NY15 2570 aa5.44□□□□□ -1.54
TRIM42-201ENST00000286349 CMYA5Q8N3K9 4069 aa5.44□□□□□ -1.54
TRIM42-201ENST00000286349 IGIPA6NJ69 53 aa5.44□□□□□ -1.54
TRIM42-201ENST00000286349 CCKP06307 115 aa5.44□□□□□ -1.54
TRIM42-201ENST00000286349 HTN1P15515 57 aa5.44□□□□□ -1.54
TRIM42-201ENST00000286349 DAD1P61803 113 aa5.44□□□□□ -1.54
TRIM42-201ENST00000286349 C2orf82Q6UX34 121 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms