RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 COX6A2Q02221 97 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 MIEN1Q9BRT3 115 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 LYSTQ99698 3801 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 TMEM223A0PJW6 202 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 E9PLD3 99 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 CCL25O15444 150 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 CRPP02741 224 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 C10orf126Q8N4M7 172 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 UBE2WQ96B02 151 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 UQCR10Q9UDW1 63 aa12.76□□□□□ -0.37
PDLIM3-202ENST00000284770 DDTP30046 118 aa12.75□□□□□ -0.37
PDLIM3-202ENST00000284770 NMUP48645 174 aa12.75□□□□□ -0.37
PDLIM3-202ENST00000284770 HERVK_113P63121 156 aa12.75□□□□□ -0.37
PDLIM3-202ENST00000284770 SEC11AP67812 179 aa12.75□□□□□ -0.37
PDLIM3-202ENST00000284770 SS18Q15532 418 aa12.75□□□□□ -0.37
PDLIM3-202ENST00000284770 GEMIN7Q9H840 131 aaKnown RBP12.75□□□□□ -0.37
PDLIM3-202ENST00000284770 TP73-AS1Q9UF72 201 aa12.75□□□□□ -0.37
PDLIM3-202ENST00000284770 IBA57-AS1B1ANH7 110 aa12.74□□□□□ -0.37
PDLIM3-202ENST00000284770 PCP2Q8IVA1 136 aa12.74□□□□□ -0.37
PDLIM3-202ENST00000284770 CDKN2A-AS1Q9UH64 79 aa12.74□□□□□ -0.37
PDLIM3-202ENST00000284770 HERVK_113P61574 105 aa12.73□□□□□ -0.37
PDLIM3-202ENST00000284770 MIAQ16674 131 aa12.73□□□□□ -0.37
PDLIM3-202ENST00000284770 SLC25A34Q6PIV7 304 aa12.73□□□□□ -0.37
PDLIM3-202ENST00000284770 LINC00469Q8N7U9 141 aa12.73□□□□□ -0.37
PDLIM3-202ENST00000284770 TRAV8-4A0A0B4J246 113 aa12.72□□□□□ -0.37
PDLIM3-202ENST00000284770 BOD1L2Q8IYS8 172 aa12.72□□□□□ -0.37
PDLIM3-202ENST00000284770 TTTY13Q9BZ97 58 aa12.72□□□□□ -0.37
PDLIM3-202ENST00000284770 IGLV10-54A0A075B6I4 117 aa12.71□□□□□ -0.37
PDLIM3-202ENST00000284770 CHCHD10Q8WYQ3 142 aaPredicted RBP12.71□□□□□ -0.38
PDLIM3-202ENST00000284770 TRAV8-3A0A0A6YYJ7 113 aa12.7□□□□□ -0.38
PDLIM3-202ENST00000284770 DLEU1O43261 78 aa12.7□□□□□ -0.38
PDLIM3-202ENST00000284770 XCL1P47992 114 aa12.7□□□□□ -0.38
PDLIM3-202ENST00000284770 KRTAP1-5Q9BYS1 174 aa12.69□□□□□ -0.38
PDLIM3-202ENST00000284770 IGHV3OR16-9A0A0B4J2B5 98 aa12.69□□□□□ -0.38
PDLIM3-202ENST00000284770 LINC00587B1AMM8 73 aa12.69□□□□□ -0.38
PDLIM3-202ENST00000284770 TSPEAR-AS2P59090 65 aa12.69□□□□□ -0.38
PDLIM3-202ENST00000284770 CD164L2Q6UWJ8 174 aa12.69□□□□□ -0.38
PDLIM3-202ENST00000284770 MAPKAPK5-AS1Q8N8E1 139 aa12.69□□□□□ -0.38
PDLIM3-202ENST00000284770 LINC00476Q8WZB0 136 aa12.69□□□□□ -0.38
PDLIM3-202ENST00000284770 NBDYA0A0U1RRE5 68 aa12.68□□□□□ -0.38
PDLIM3-202ENST00000284770 H3BRM9 83 aa12.68□□□□□ -0.38
PDLIM3-202ENST00000284770 LEPROTO15243 131 aa12.68□□□□□ -0.38
PDLIM3-202ENST00000284770 LY6G6CO95867 125 aa12.68□□□□□ -0.38
PDLIM3-202ENST00000284770 SPINK8P0C7L1 97 aa12.68□□□□□ -0.38
PDLIM3-202ENST00000284770 TTC32Q5I0X7 151 aa12.68□□□□□ -0.38
PDLIM3-202ENST00000284770 DNAH1Q9P2D7 4330 aa12.68□□□□□ -0.38
PDLIM3-202ENST00000284770 IGHV3-64A0A075B6Q5 118 aa12.67□□□□□ -0.38
PDLIM3-202ENST00000284770 IGHV1-58A0A0C4DH39 117 aa12.67□□□□□ -0.38
PDLIM3-202ENST00000284770 Q9HAA7 133 aa12.67□□□□□ -0.38
PDLIM3-202ENST00000284770 C1orf43Q9BWL3 253 aa12.66□□□□□ -0.38
PDLIM3-202ENST00000284770 SMIM1B2RUZ4 78 aa12.66□□□□□ -0.38
PDLIM3-202ENST00000284770 J3QQQ9 107 aa12.66□□□□□ -0.38
PDLIM3-202ENST00000284770 C2orf91Q6ZV80 131 aa12.66□□□□□ -0.38
PDLIM3-202ENST00000284770 VPS13DQ5THJ4 4388 aa12.66□□□□□ -0.38
PDLIM3-202ENST00000284770 IGLV5-39A0A0G2JS06 123 aa12.65□□□□□ -0.38
PDLIM3-202ENST00000284770 HNRNPA3P51991 378 aaKnown RBP12.65□□□□□ -0.38
PDLIM3-202ENST00000284770 PLEKHB2Q96CS7 222 aa12.65□□□□□ -0.38
PDLIM3-202ENST00000284770 IGKV2D-24A0A075B6R9 120 aa12.64□□□□□ -0.39
PDLIM3-202ENST00000284770 GAGE12HA6NDE8 117 aa12.64□□□□□ -0.39
PDLIM3-202ENST00000284770 FOXI1Q12951 378 aa12.64□□□□□ -0.39
PDLIM3-202ENST00000284770 KRTAP26-1Q6PEX3 210 aa12.64□□□□□ -0.39
PDLIM3-202ENST00000284770 A0A087WZ39 114 aa12.64□□□□□ -0.39
PDLIM3-202ENST00000284770 MYMXA0A1B0GTQ4 84 aa12.64□□□□□ -0.39
PDLIM3-202ENST00000284770 C5orf38Q86SI9 138 aa12.64□□□□□ -0.39
PDLIM3-202ENST00000284770 RMI2Q96E14 147 aa12.63□□□□□ -0.39
PDLIM3-202ENST00000284770 ZNF815PA8K554 130 aa12.61□□□□□ -0.39
PDLIM3-202ENST00000284770 COX7A2LO14548 114 aa12.61□□□□□ -0.39
PDLIM3-202ENST00000284770 LGALS3P17931 250 aaKnown RBP12.61□□□□□ -0.39
PDLIM3-202ENST00000284770 CTAG1AP78358 180 aa12.61□□□□□ -0.39
PDLIM3-202ENST00000284770 LINC01561Q8N1V8 128 aa12.61□□□□□ -0.39
PDLIM3-202ENST00000284770 M0R2N4 97 aa12.6□□□□□ -0.39
PDLIM3-202ENST00000284770 COX11Q9Y6N1 276 aa12.6□□□□□ -0.39
PDLIM3-202ENST00000284770 Q6ZR54 194 aa12.59□□□□□ -0.39
PDLIM3-202ENST00000284770 HIGD1BQ9P298 99 aa12.58□□□□□ -0.39
PDLIM3-202ENST00000284770 MALP21145 153 aa12.58□□□□□ -0.4
PDLIM3-202ENST00000284770 TM2D2Q9BX73 214 aa12.58□□□□□ -0.4
PDLIM3-202ENST00000284770 NDUFA12Q9UI09 145 aa12.56□□□□□ -0.4
PDLIM3-202ENST00000284770 ALMS1Q8TCU4 4167 aa12.55□□□□□ -0.4
PDLIM3-202ENST00000284770 APOMO95445 188 aa12.55□□□□□ -0.4
PDLIM3-202ENST00000284770 NDUFA1O15239 70 aa12.53□□□□□ -0.4
PDLIM3-202ENST00000284770 SCGB1D4Q6XE38 83 aa12.53□□□□□ -0.4
PDLIM3-202ENST00000284770 COX7B2Q8TF08 81 aa12.53□□□□□ -0.4
PDLIM3-202ENST00000284770 ORAOV1Q8WV07 137 aa12.52□□□□□ -0.41
PDLIM3-202ENST00000284770 ZNF625Q96I27 306 aaPredicted RBP12.52□□□□□ -0.41
PDLIM3-202ENST00000284770 KMT2AQ03164 3969 aa12.52□□□□□ -0.41
PDLIM3-202ENST00000284770 A0A0J9YXY3 114 aa12.51□□□□□ -0.41
PDLIM3-202ENST00000284770 PSCAO43653 123 aa12.51□□□□□ -0.41
PDLIM3-202ENST00000284770 C6orf223Q8N319 242 aa12.51□□□□□ -0.41
PDLIM3-202ENST00000284770 SNHG12Q9BXW3 62 aa12.51□□□□□ -0.41
PDLIM3-202ENST00000284770 Q6ZRN7 208 aaPredicted RBP12.51□□□□□ -0.41
PDLIM3-202ENST00000284770 TOMM7Q9P0U1 55 aa12.51□□□□□ -0.41
PDLIM3-202ENST00000284770 LCE6AA0A183 80 aa12.5□□□□□ -0.41
PDLIM3-202ENST00000284770 HSD52Q0P140 79 aa12.5□□□□□ -0.41
PDLIM3-202ENST00000284770 CFAP161Q6P656 301 aa12.5□□□□□ -0.41
PDLIM3-202ENST00000284770 Q8IZM0 81 aa12.5□□□□□ -0.41
PDLIM3-202ENST00000284770 C15orf56Q8N910 161 aa12.5□□□□□ -0.41
PDLIM3-202ENST00000284770 M0R143 59 aa12.49□□□□□ -0.41
PDLIM3-202ENST00000284770 EREGO14944 169 aa12.49□□□□□ -0.41
PDLIM3-202ENST00000284770 HINT1P49773 126 aaPredicted RBP12.49□□□□□ -0.41
PDLIM3-202ENST00000284770 KIAA0087Q14695 138 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms