RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 NRACQ8N912 160 aa5.95□□□□□ -1.46
LIMD1-201ENST00000273317 TSHBP01222 138 aa5.95□□□□□ -1.46
LIMD1-201ENST00000273317 Q6Q795 121 aa5.95□□□□□ -1.46
LIMD1-201ENST00000273317 FAM30AQ9NZY2 134 aa5.95□□□□□ -1.46
LIMD1-201ENST00000273317 LINC00474Q9P2X8 69 aa5.95□□□□□ -1.46
LIMD1-201ENST00000273317 IGKV2-24A0A0C4DH68 120 aa5.95□□□□□ -1.46
LIMD1-201ENST00000273317 ZNF295-AS1Q8N0V1 137 aa5.95□□□□□ -1.46
LIMD1-201ENST00000273317 SOSTDC1Q6X4U4 206 aa5.94□□□□□ -1.46
LIMD1-201ENST00000273317 SYCNQ0VAF6 134 aa5.94□□□□□ -1.46
LIMD1-201ENST00000273317 TP53TG3Q9ULZ0 132 aa5.94□□□□□ -1.46
LIMD1-201ENST00000273317 LY6LH3BQJ8 138 aa5.94□□□□□ -1.46
LIMD1-201ENST00000273317 MRGPRG-AS1Q2M3A8 158 aa5.94□□□□□ -1.46
LIMD1-201ENST00000273317 IGF2RP11717 2491 aa5.94□□□□□ -1.46
LIMD1-201ENST00000273317 MRPS12O15235 138 aaKnown RBP5.94□□□□□ -1.46
LIMD1-201ENST00000273317 LINC01548A6NM66 108 aa5.94□□□□□ -1.46
LIMD1-201ENST00000273317 PLA2G5P39877 138 aa5.93□□□□□ -1.46
LIMD1-201ENST00000273317 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.93□□□□□ -1.46
LIMD1-201ENST00000273317 RBX1P62877 108 aa5.93□□□□□ -1.46
LIMD1-201ENST00000273317 SERP1Q9Y6X1 66 aa5.93□□□□□ -1.46
LIMD1-201ENST00000273317 LINC00694P0DN24 101 aa5.93□□□□□ -1.46
LIMD1-201ENST00000273317 C2orf91Q6ZV80 131 aa5.93□□□□□ -1.46
LIMD1-201ENST00000273317 LMO4P61968 165 aa5.93□□□□□ -1.46
LIMD1-201ENST00000273317 CNFNQ9BYD5 112 aa5.93□□□□□ -1.46
LIMD1-201ENST00000273317 PCSK5Q92824 1860 aa5.93□□□□□ -1.46
LIMD1-201ENST00000273317 DEFB131BA0A096LNP1 70 aa5.92□□□□□ -1.46
LIMD1-201ENST00000273317 BRWD1-AS2P59051 145 aa5.92□□□□□ -1.46
LIMD1-201ENST00000273317 MAPKAPK5-AS1Q8N8E1 139 aa5.92□□□□□ -1.46
LIMD1-201ENST00000273317 CENPEQ02224 2701 aa5.92□□□□□ -1.46
LIMD1-201ENST00000273317 LOC107984640A0A0U1RRK4 108 aa5.92□□□□□ -1.46
LIMD1-201ENST00000273317 BPTFQ12830 3046 aa5.92□□□□□ -1.46
LIMD1-201ENST00000273317 Q8N9L7 120 aa5.92□□□□□ -1.46
LIMD1-201ENST00000273317 C9orf85Q96MD7 179 aa5.92□□□□□ -1.46
LIMD1-201ENST00000273317 FAM19A5Q7Z5A7 132 aaPredicted RBP5.92□□□□□ -1.46
LIMD1-201ENST00000273317 TRAV10A0A0B4J240 114 aa5.92□□□□□ -1.46
LIMD1-201ENST00000273317 KLLNB2CW77 178 aa5.92□□□□□ -1.46
LIMD1-201ENST00000273317 ZNF73O43830 326 aaPredicted RBP5.92□□□□□ -1.46
LIMD1-201ENST00000273317 WFDC13Q8IUB5 93 aa5.92□□□□□ -1.46
LIMD1-201ENST00000273317 SMIM26A0A096LP01 95 aa5.91□□□□□ -1.46
LIMD1-201ENST00000273317 C1orf158Q8N1D5 194 aa5.91□□□□□ -1.46
LIMD1-201ENST00000273317 Q8IZM0 81 aa5.91□□□□□ -1.46
LIMD1-201ENST00000273317 LELP1Q5T871 98 aa5.91□□□□□ -1.46
LIMD1-201ENST00000273317 C6orf99Q4VX62 202 aa5.91□□□□□ -1.46
LIMD1-201ENST00000273317 DCANP1Q8TF63 244 aa5.91□□□□□ -1.46
LIMD1-201ENST00000273317 TRAV7A0A075B6U4 112 aa5.9□□□□□ -1.46
LIMD1-201ENST00000273317 UBE2D1P51668 147 aa5.9□□□□□ -1.46
LIMD1-201ENST00000273317 UBE2D2P62837 147 aa5.9□□□□□ -1.46
LIMD1-201ENST00000273317 MSMPQ1L6U9 139 aa5.9□□□□□ -1.46
LIMD1-201ENST00000273317 C3orf84H3BNL1 204 aa5.9□□□□□ -1.46
LIMD1-201ENST00000273317 CRIP1P50238 77 aa5.9□□□□□ -1.46
LIMD1-201ENST00000273317 PSPHP1O15172 72 aa5.9□□□□□ -1.47
LIMD1-201ENST00000273317 IGLV4-69A0A075B6H9 119 aa5.9□□□□□ -1.47
LIMD1-201ENST00000273317 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.89□□□□□ -1.47
LIMD1-201ENST00000273317 UBE2D4Q9Y2X8 147 aa5.89□□□□□ -1.47
LIMD1-201ENST00000273317 F8WDY8 70 aa5.89□□□□□ -1.47
LIMD1-201ENST00000273317 C22orf34Q6ZV56 151 aa5.89□□□□□ -1.47
LIMD1-201ENST00000273317 PLA2G1BP04054 148 aaKnown RBP5.89□□□□□ -1.47
LIMD1-201ENST00000273317 XAGE1AQ9HD64 81 aa5.89□□□□□ -1.47
LIMD1-201ENST00000273317 Q8NA96 180 aa5.89□□□□□ -1.47
LIMD1-201ENST00000273317 CRIP3Q6Q6R5 217 aa5.89□□□□□ -1.47
LIMD1-201ENST00000273317 Q6ZQY7 126 aa5.89□□□□□ -1.47
LIMD1-201ENST00000273317 COL27A1Q8IZC6 1860 aaPredicted RBP5.88□□□□□ -1.47
LIMD1-201ENST00000273317 SPINK6Q6UWN8 80 aa5.88□□□□□ -1.47
LIMD1-201ENST00000273317 Q6ZPA2 131 aa5.88□□□□□ -1.47
LIMD1-201ENST00000273317 PSMG3-AS1Q96PY0 264 aa5.88□□□□□ -1.47
LIMD1-201ENST00000273317 SMIM11BQ8TCY0 68 aa5.88□□□□□ -1.47
LIMD1-201ENST00000273317 RNASE3P12724 160 aaKnown RBP5.87□□□□□ -1.47
LIMD1-201ENST00000273317 Q8N6K4 173 aa5.87□□□□□ -1.47
LIMD1-201ENST00000273317 NRGNQ92686 78 aa5.87□□□□□ -1.47
LIMD1-201ENST00000273317 A0A1W2PNU3 283 aaPredicted RBP5.87□□□□□ -1.47
LIMD1-201ENST00000273317 C10orf25Q5T742 122 aa5.87□□□□□ -1.47
LIMD1-201ENST00000273317 PRORYQ9H606 182 aa5.87□□□□□ -1.47
LIMD1-201ENST00000273317 PMAIP1Q13794 54 aa5.87□□□□□ -1.47
LIMD1-201ENST00000273317 SHISA2Q6UWI4 295 aa5.87□□□□□ -1.47
LIMD1-201ENST00000273317 EPG5Q9HCE0 2579 aa5.87□□□□□ -1.47
LIMD1-201ENST00000273317 X6R8D5 127 aa5.87□□□□□ -1.47
LIMD1-201ENST00000273317 POLR2KP53803 58 aaKnown RBP5.87□□□□□ -1.47
LIMD1-201ENST00000273317 CELA1Q9UNI1 258 aa5.87□□□□□ -1.47
LIMD1-201ENST00000273317 UBE2D3P61077 147 aa5.87□□□□□ -1.47
LIMD1-201ENST00000273317 SERTAD4-AS1Q5TG53 156 aa5.86□□□□□ -1.47
LIMD1-201ENST00000273317 LINC00959A0A1B0GUT2 108 aa5.86□□□□□ -1.47
LIMD1-201ENST00000273317 LINC00526Q96FQ7 95 aa5.86□□□□□ -1.47
LIMD1-201ENST00000273317 PPDPFQ9H3Y8 114 aa5.86□□□□□ -1.47
LIMD1-201ENST00000273317 XGP55808 180 aa5.86□□□□□ -1.47
LIMD1-201ENST00000273317 CHCHD7Q9BUK0 85 aa5.86□□□□□ -1.47
LIMD1-201ENST00000273317 BEAN1Q3B7T3 259 aa5.86□□□□□ -1.47
LIMD1-201ENST00000273317 Q8N976 141 aa5.85□□□□□ -1.47
LIMD1-201ENST00000273317 C11orf71Q6IPW1 123 aa5.85□□□□□ -1.47
LIMD1-201ENST00000273317 Q8N814 137 aa5.85□□□□□ -1.47
LIMD1-201ENST00000273317 C1orf229Q6ZS94 237 aaPredicted RBP5.85□□□□□ -1.47
LIMD1-201ENST00000273317 NTM-AS1Q6ZSK4 140 aa5.85□□□□□ -1.47
LIMD1-201ENST00000273317 IGKV2-28A0A075B6P5 120 aa5.85□□□□□ -1.47
LIMD1-201ENST00000273317 IGKV2D-28P01615 120 aa5.85□□□□□ -1.47
LIMD1-201ENST00000273317 KPRPQ5T749 579 aaPredicted RBP5.85□□□□□ -1.47
LIMD1-201ENST00000273317 IGLV1-40P01703 118 aa5.84□□□□□ -1.47
LIMD1-201ENST00000273317 EGFEM1PQ0D2K5 195 aa5.84□□□□□ -1.47
LIMD1-201ENST00000273317 PRR9Q5T870 116 aa5.84□□□□□ -1.47
LIMD1-201ENST00000273317 Q6ZSV7 163 aa5.84□□□□□ -1.47
LIMD1-201ENST00000273317 PLAC8L1A1L4L8 177 aa5.84□□□□□ -1.47
LIMD1-201ENST00000273317 WFDC10AQ9H1F0 79 aa5.84□□□□□ -1.47
LIMD1-201ENST00000273317 ZNF702PQ9H963 129 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms