RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 IGKV2-28A0A075B6P5 120 aa12.3□□□□□ -0.44
LRRC56-201ENST00000270115 IGKV2D-28P01615 120 aa12.3□□□□□ -0.44
LRRC56-201ENST00000270115 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
LRRC56-201ENST00000270115 DEFB131AP59861 70 aa12.3□□□□□ -0.44
LRRC56-201ENST00000270115 HILS1P60008 231 aa12.3□□□□□ -0.44
LRRC56-201ENST00000270115 WFDC9Q8NEX5 89 aa12.3□□□□□ -0.44
LRRC56-201ENST00000270115 SND1-IT1Q9HBX3 110 aa12.3□□□□□ -0.44
LRRC56-201ENST00000270115 LRRK2Q5S007 2527 aa12.3□□□□□ -0.44
LRRC56-201ENST00000270115 LECT2O14960 151 aa12.3□□□□□ -0.44
LRRC56-201ENST00000270115 POLQO75417 2590 aa12.29□□□□□ -0.44
LRRC56-201ENST00000270115 ZNF415Q09FC8 603 aa12.29□□□□□ -0.44
LRRC56-201ENST00000270115 Q96MF0 132 aa12.29□□□□□ -0.44
LRRC56-201ENST00000270115 TOMM7Q9P0U1 55 aa12.29□□□□□ -0.44
LRRC56-201ENST00000270115 C10orf105Q8TEF2 133 aa12.29□□□□□ -0.44
LRRC56-201ENST00000270115 BBC3Q96PG8 261 aaPredicted RBP12.29□□□□□ -0.44
LRRC56-201ENST00000270115 RBMY1BA6NDE4 496 aaKnown RBP12.28□□□□□ -0.44
LRRC56-201ENST00000270115 RBMY1EA6NEQ0 496 aaKnown RBP12.28□□□□□ -0.44
LRRC56-201ENST00000270115 F5H768 121 aa12.28□□□□□ -0.44
LRRC56-201ENST00000270115 RBMY1DP0C7P1 496 aaKnown RBP12.28□□□□□ -0.44
LRRC56-201ENST00000270115 FHL2Q14192 279 aa12.27□□□□□ -0.44
LRRC56-201ENST00000270115 USP9YO00507 2555 aaPredicted RBP12.27□□□□□ -0.45
LRRC56-201ENST00000270115 NOTCH3Q9UM47 2321 aa12.27□□□□□ -0.45
LRRC56-201ENST00000270115 Q5XG85 94 aa12.27□□□□□ -0.45
LRRC56-201ENST00000270115 DOPEY1Q5JWR5 2465 aa12.26□□□□□ -0.45
LRRC56-201ENST00000270115 PSMB8P28062 276 aa12.26□□□□□ -0.45
LRRC56-201ENST00000270115 LINC00158P58513 81 aa12.26□□□□□ -0.45
LRRC56-201ENST00000270115 IGKV3OR2-268A0A0C4DH90 116 aa12.25□□□□□ -0.45
LRRC56-201ENST00000270115 PF4P02776 101 aa12.25□□□□□ -0.45
LRRC56-201ENST00000270115 RPL36AP83881 106 aaKnown RBP12.25□□□□□ -0.45
LRRC56-201ENST00000270115 RPL36ALQ969Q0 106 aaKnown RBP12.25□□□□□ -0.45
LRRC56-201ENST00000270115 TRAV23DV6A0A075B6W5 121 aa12.24□□□□□ -0.45
LRRC56-201ENST00000270115 IGHV4-61A0A0C4DH41 118 aa12.23□□□□□ -0.45
LRRC56-201ENST00000270115 NTM-AS1Q6ZSK4 140 aa12.23□□□□□ -0.45
LRRC56-201ENST00000270115 OVOL2Q9BRP0 275 aa12.23□□□□□ -0.45
LRRC56-201ENST00000270115 GHRHP01286 108 aa12.23□□□□□ -0.45
LRRC56-201ENST00000270115 OBSCN-AS1Q96MR7 158 aa12.23□□□□□ -0.45
LRRC56-201ENST00000270115 C11orf72Q8NBR9 251 aa12.22□□□□□ -0.45
LRRC56-201ENST00000270115 CDC42SE2Q9NRR3 84 aa12.22□□□□□ -0.45
LRRC56-201ENST00000270115 F8WDY8 70 aa12.21□□□□□ -0.45
LRRC56-201ENST00000270115 PFN2P35080 140 aa12.21□□□□□ -0.45
LRRC56-201ENST00000270115 CCL18P55774 89 aa12.21□□□□□ -0.46
LRRC56-201ENST00000270115 H0YGX0 51 aa12.2□□□□□ -0.46
LRRC56-201ENST00000270115 FAM19A1Q7Z5A9 133 aa12.2□□□□□ -0.46
LRRC56-201ENST00000270115 ZANQ9Y493 2812 aa12.2□□□□□ -0.46
LRRC56-201ENST00000270115 COX7B2Q8TF08 81 aa12.2□□□□□ -0.46
LRRC56-201ENST00000270115 FBN2P35556 2912 aa12.2□□□□□ -0.46
LRRC56-201ENST00000270115 PAX4O43316 350 aa12.19□□□□□ -0.46
LRRC56-201ENST00000270115 FAM19A3Q7Z5A8 133 aa12.18□□□□□ -0.46
LRRC56-201ENST00000270115 C20orf197Q8N268 126 aa12.18□□□□□ -0.46
LRRC56-201ENST00000270115 TRGV1A0A0A0MS02 117 aa12.18□□□□□ -0.46
LRRC56-201ENST00000270115 ENHOQ6UWT2 76 aa12.18□□□□□ -0.46
LRRC56-201ENST00000270115 DEFB136Q30KP8 78 aa12.18□□□□□ -0.46
LRRC56-201ENST00000270115 ABCA12Q86UK0 2595 aa12.17□□□□□ -0.46
LRRC56-201ENST00000270115 NBPF19A0A087WUL8 3843 aa12.17□□□□□ -0.46
LRRC56-201ENST00000270115 IGHV4-59P01825 116 aa12.17□□□□□ -0.46
LRRC56-201ENST00000270115 TMEM89A2RUT3 159 aa12.17□□□□□ -0.46
LRRC56-201ENST00000270115 SS18Q15532 418 aa12.17□□□□□ -0.46
LRRC56-201ENST00000270115 CCKP06307 115 aa12.16□□□□□ -0.46
LRRC56-201ENST00000270115 TMEM243Q9BU79 118 aa12.16□□□□□ -0.46
LRRC56-201ENST00000270115 C11orf68Q9H3H3 251 aaKnown RBP12.16□□□□□ -0.46
LRRC56-201ENST00000270115 XCL2Q9UBD3 114 aa12.16□□□□□ -0.46
LRRC56-201ENST00000270115 PTPN13Q12923 2485 aa12.16□□□□□ -0.46
LRRC56-201ENST00000270115 UBE2L6O14933 153 aa12.16□□□□□ -0.46
LRRC56-201ENST00000270115 AVPP01185 164 aa12.16□□□□□ -0.46
LRRC56-201ENST00000270115 ORMDL1Q9P0S3 153 aa12.16□□□□□ -0.46
LRRC56-201ENST00000270115 SLURP1P55000 103 aa12.15□□□□□ -0.46
LRRC56-201ENST00000270115 UBE2E2Q96LR5 201 aa12.15□□□□□ -0.46
LRRC56-201ENST00000270115 RNASE1P07998 156 aaKnown RBP12.14□□□□□ -0.47
LRRC56-201ENST00000270115 C18orf65Q6ZTR6 163 aa12.13□□□□□ -0.47
LRRC56-201ENST00000270115 CCL19Q99731 98 aa12.13□□□□□ -0.47
LRRC56-201ENST00000270115 IGHV4-30-2A0A087WSY4 118 aa12.13□□□□□ -0.47
LRRC56-201ENST00000270115 K7EQD1 137 aa12.12□□□□□ -0.47
LRRC56-201ENST00000270115 CHD6Q8TD26 2715 aa12.12□□□□□ -0.47
LRRC56-201ENST00000270115 INSP01308 110 aa12.11□□□□□ -0.47
LRRC56-201ENST00000270115 Q6ZTI0 123 aa12.11□□□□□ -0.47
LRRC56-201ENST00000270115 NDUFC2O95298 119 aa12.11□□□□□ -0.47
LRRC56-201ENST00000270115 ZNF843Q8N446 348 aa12.11□□□□□ -0.47
LRRC56-201ENST00000270115 XCL1P47992 114 aa12.1□□□□□ -0.47
LRRC56-201ENST00000270115 MAP6D1Q9H9H5 199 aa12.1□□□□□ -0.47
LRRC56-201ENST00000270115 FAM236DA0A1B0GTK5 79 aa12.09□□□□□ -0.47
LRRC56-201ENST00000270115 FAM236CP0DP71 79 aa12.09□□□□□ -0.47
LRRC56-201ENST00000270115 DEFB112Q30KQ8 113 aa12.09□□□□□ -0.47
LRRC56-201ENST00000270115 UBR5O95071 2799 aaPredicted RBP12.09□□□□□ -0.47
LRRC56-201ENST00000270115 LOC100131303A0A0U1RQF7 123 aa12.08□□□□□ -0.48
LRRC56-201ENST00000270115 A8MTW9 85 aa12.08□□□□□ -0.48
LRRC56-201ENST00000270115 PRR3P79522 188 aaKnown RBP12.08□□□□□ -0.48
LRRC56-201ENST00000270115 KHDC1LQ5JSQ8 128 aa12.08□□□□□ -0.48
LRRC56-201ENST00000270115 S100A7L2Q5SY68 101 aa12.08□□□□□ -0.48
LRRC56-201ENST00000270115 MAPK1IP1LQ8NDC0 245 aa12.07□□□□□ -0.48
LRRC56-201ENST00000270115 TRBV6-4A0A1B0GX49 114 aa12.07□□□□□ -0.48
LRRC56-201ENST00000270115 MSMBP08118 114 aa12.07□□□□□ -0.48
LRRC56-201ENST00000270115 ANKRD17O75179 2603 aaKnown RBP12.06□□□□□ -0.48
LRRC56-201ENST00000270115 NAV2Q8IVL1 2488 aa12.06□□□□□ -0.48
LRRC56-201ENST00000270115 IGLV4-60A0A075B6I1 120 aa12.06□□□□□ -0.48
LRRC56-201ENST00000270115 IBA57-AS1B1ANH7 110 aa12.06□□□□□ -0.48
LRRC56-201ENST00000270115 NDUFC2-KCTD14E9PQ53 114 aa12.06□□□□□ -0.48
LRRC56-201ENST00000270115 LINC00336Q6ZUF6 198 aa12.05□□□□□ -0.48
LRRC56-201ENST00000270115 UBL5Q9BZL1 73 aa12.05□□□□□ -0.48
LRRC56-201ENST00000270115 TRBV10-1A0A0K0K1A3 114 aa12.04□□□□□ -0.48
LRRC56-201ENST00000270115 JMJD7-PLA2G4BH0Y9G9 81 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms